FFCP PHASE1:Hg19::chr3:53528659..53528750,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=776 | |EntrezGene=776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1391 | |HGNC=1391 | ||
|TSSclassifier=strong | |||
|UniProt=Q01668 | |UniProt=Q01668 | ||
|association_with_transcript=0bp_to_ENST00000350061_5end | |association_with_transcript=0bp_to_ENST00000350061_5end | ||
|cluster_id=chr3:53528659..53528750,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_CACNA1D_5end | |description=CAGE_peak_1_at_CACNA1D_5end | ||
|id=chr3:53528659..53528750,+ | |id=chr3:53528659..53528750,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.26e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;2.09e-38;32!UBERON:0002780;3.39e-38;41!UBERON:0001890;3.39e-38;41!UBERON:0002619;3.27e-37;22!UBERON:0001893;6.18e-37;34!UBERON:0003528;9.93e-37;34!UBERON:0002020;9.93e-37;34!UBERON:0002791;7.55e-36;32!UBERON:0000073;1.13e-34;53!UBERON:0002616;1.13e-34;53!UBERON:0001950;3.37e-34;20!UBERON:0000956;5.66e-32;25!UBERON:0000203;5.66e-32;25!UBERON:0000955;1.40e-23;68!UBERON:0001017;7.95e-23;75!UBERON:0001016;1.93e-18;83!UBERON:0007023;1.97e-15;114!UBERON:0002420;4.85e-12;9!UBERON:0007245;4.85e-12;9!UBERON:0010009;4.85e-12;9!UBERON:0010011;4.85e-12;9!UBERON:0000454;4.85e-12;9!UBERON:0000125;7.52e-12;9!UBERON:0002308;7.52e-12;9!UBERON:0001871;7.90e-12;6!UBERON:0001894;8.16e-12;7!UBERON:0000200;2.25e-11;6!UBERON:0004733;1.69e-10;12!UBERON:0002028;1.69e-10;12!UBERON:0002298;8.24e-10;6!UBERON:0001872;1.39e-09;5!UBERON:0004732;1.60e-09;13!UBERON:0002021;1.91e-09;5!UBERON:0000349;2.48e-09;5!UBERON:0011216;3.24e-09;132!UBERON:0009663;4.66e-09;7!UBERON:0003296;3.29e-08;4!UBERON:0010133;3.29e-08;4!UBERON:0000369;3.66e-08;4!UBERON:0002435;3.66e-08;4!UBERON:0000204;3.66e-08;4!UBERON:0002784;1.10e-07;4!UBERON:0002680;5.61e-07;9!UBERON:0001895;5.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.66e-66,56;UBERON:0005068,2.66e-66,56;UBERON:0006241,2.66e-66,56;UBERON:0007135,2.66e-66,56;UBERON:0000073,1.93e-62,53;UBERON:0002616,1.93e-62,53;UBERON:0002780,3.05e-53,41;UBERON:0001890,3.05e-53,41;UBERON:0003080,3.05e-53,41;UBERON:0006240,3.05e-53,41;UBERON:0001017,2.17e-52,81;UBERON:0007023,1.38e-51,114;UBERON:0000955,2.01e-51,68;UBERON:0006238,2.01e-51,68;UBERON:0003075,3.07e-49,82;UBERON:0007284,3.07e-49,82;UBERON:0002346,4.00e-46,86;UBERON:0001016,2.06e-45,89;UBERON:0001869,6.18e-43,32;UBERON:0001893,9.12e-43,34;UBERON:0003528,1.34e-42,34;UBERON:0002020,1.34e-42,34;UBERON:0003056,4.15e-41,61;UBERON:0010371,6.07e-40,104;UBERON:0002791,1.10e-39,32;UBERON:0002619,3.06e-37,22;UBERON:0001950,3.15e-34,20;UBERON:0000956,5.35e-32,25;UBERON:0000203,5.35e-32,25;UBERON:0011216,1.40e-29,223;UBERON:0010314,5.81e-29,132;UBERON:0004121,9.33e-23,171;UBERON:0000924,9.33e-23,171;UBERON:0006601,9.33e-23,171;UBERON:0000025,9.10e-21,192;UBERON:0004111,6.84e-15,240;UBERON:0003076,6.39e-14,15;UBERON:0003057,6.39e-14,15;UBERON:0000483,8.47e-14,306;UBERON:0000119,1.85e-13,309;UBERON:0002420,4.39e-12,9;UBERON:0007245,4.39e-12,9;UBERON:0010009,4.39e-12,9;UBERON:0010011,4.39e-12,9;UBERON:0000454,4.39e-12,9;UBERON:0000125,7.01e-12,9;UBERON:0002308,7.01e-12,9;UBERON:0001871,8.39e-12,6;UBERON:0001894,9.73e-12,7;UBERON:0006222,9.73e-12,7;UBERON:0000200,2.26e-11,6;UBERON:0004733,1.74e-10,12;UBERON:0002028,1.74e-10,12;UBERON:0007277,1.74e-10,12;UBERON:0002298,8.53e-10,6;UBERON:0001872,1.24e-09,5;UBERON:0004732,1.64e-09,13;UBERON:0002021,1.82e-09,5;UBERON:0000349,2.43e-09,5;UBERON:0009663,4.41e-09,7;UBERON:0003296,3.27e-08,4;UBERON:0010133,3.27e-08,4;UBERON:0000369,3.70e-08,4;UBERON:0002435,3.70e-08,4;UBERON:0000204,3.70e-08,4;UBERON:0010082,3.70e-08,4;UBERON:0000922,9.35e-08,592;UBERON:0002784,1.19e-07,4;UBERON:0005423,1.56e-07,581;UBERON:0002050,3.41e-07,564;UBERON:0002680,5.53e-07,9;UBERON:0001895,5.53e-07,9;UBERON:0010092,5.53e-07,9;UBERON:0000923,5.85e-07,560;UBERON:0010316,5.85e-07,560;UBERON:0005291,5.85e-07,560;UBERON:0006598,5.85e-07,560;UBERON:0010317,5.85e-07,560;UBERON:0002532,5.85e-07,560 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0.0764134057479513,0.246301768349837,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3858578411533,0,2.55244006342983,1.10864698731282,1.31752178539689,5.89405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,2.53510069643662,2.94848165003288,4.72631925345123,0,0.368965315629341,0.343135620597051,0,0,0,0,0,0,0,0.579652024875384,0.70445216541493,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.571481048629521,0.381988425558278,0,0,0.102827492703324,0,0,0.336393253036082,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,1.67516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0.650756789328606,4.43076350085206,0.457847324091717,0.82509499920588,0,0,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0.356128142586949,0,0.192190067365106,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0.670302275535787,0,3.38917682796405,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0.278406173895242,0,0.270455678475983,0,0,0.37428108081644,0,0,0,0.284136146806413,0,0.296964680832639,0,7.95318118213038,13.7856028082302,0,0,1.90012867315194,1.19548792950642,0.828851746593443,4.28285671352269,0,0,0,0,0.537063524026827,0,0.690503839458535,0,0,10.6626602070474,7.69975214743365,9.98068990005971,4.42727193844896,15.5678799993228,0,0,0.254253650292766,0.472775363535873,2.06846023944879,0,1.73624994933292,13.2861207872076,16.6423085303063,10.6807215421958,18.3561571485833,20.6883333267483,5.92340572315726,6.31843088410143,0,3.69361240818226,0,0.46112780877612,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26465616318295,0.282706142867882,5.19332735381019,0.995261931078505,0.707660516026713,2.4441205797345,0.889563386041866,0.741383633679017,0.835375596043643,5.39209063845416,0,2.34264445725339,0,0,0.728341138602278,0.789168805698781,1.20990716048664,5.81538247097931,4.86536663139357,0,0,0.664653872707185,0.330991955875499,0.941798755221676,0,0,0,0,0,0,4.01871336956669,0,0.19351266257817,0.219267951258557,0.246346371159628,0.290967049465258,0,1.80784592624426,0,0,15.1945910294109,1.56441106187842,0,7.04394882639863,0.999048047910651,1.87317542300338,0,0,0,0,0.235694034616795,0.271808412147228,0.418411385249333,0,0,6.00420288709789,3.83335060897581,0,0,0.525774708558629,0.837847203816763,0.458320848023367,0,0.798716001995964,0,0,0.739018197353989,0,1.16495949527454,0.0787831823072236,0,0,1.27955725969173,0,8.74752658790234,8.30840777280611,0,0.137539436597234,0.415440338029185,0,0,21.8090908402309,0,4.09789677955831,4.19636705079985,0,0,0,0,0,0,0,0,0.653174720218818,1.19730191562487,0,0,0,3.51725360827398,1.32506888912221,6.33486486171598,6.21493228190643,2.9084762440336,0,2.88326013932776,10.847097051877,2.48543433208317,0,0,0,0.638341257770182,0.544017803369474,0,0.306345576763462,0,7.22448842751078,11.5188863395708,12.0806002252944,14.6473388926605,2.29363678276028,3.77158775225298,9.12817123238337,0.138348634936231,0,0,3.42558400253961,0,0.936669811613763,2.02889440055155,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1023604874765,0,0,0,0,0,0,2.59983614611409,0,0,0,0,0,0.622077260032973,0.383683113910955,0,0,0.873677105536111,0,0.212574920101683,0.123935764259002,0,0,0,2.40171224485641,0,0,16.0573062741149,18.420554922326,13.5688780198579,7.99953820538945,4.28521883576921,22.4069497984066,13.7254298787073,0,0,0,0,0,0.381382095467167,0.690359926060101,0.198916222116275,0.676892955143315,0.40341013740704,2.34454203369928,0.523813388962845,0,0.147856086217045,15.6687196314676,11.7161714792077,16.1215701270924,18.3271691460391,4.92277328116398,0,0.496211178389294,0,1.02209942111676,32.1421101526972,19.5044558886918,7.89055285507621,14.3427180551317,0.0887023701626388,0,0,12.2345519358297,17.1009211263408,0.118193840883968,0,4.00314773537622,11.7836692437001,0,2.73947616152849,3.45484145949794,0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|short_description=p1@CACNA1D | |short_description=p1@CACNA1D | ||
}} | }} |
Latest revision as of 01:54, 19 September 2015
Short description: | p1@CACNA1D |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CACNA1D_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000350061_5end |
EntrezGene: | CACNA1D |
HGNC: | 1391 |
UniProt: | Q01668 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data