FFCP PHASE1:Hg19::chr1:183774240..183774270,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23179 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30281 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NZL6 | |||
|association_with_transcript=0bp_to_ENST00000360851_5end | |||
|cluster_id=chr1:183774240..183774270,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_1_at_RGL1_5end | |||
|id=chr1:183774240..183774270,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.33e-08!35;CL:0002139!5.31e-07!24;CL:0000557!5.78e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.56e-08;39!CL:0000234;4.56e-08;39!CL:0000115;9.03e-08;36!CL:0002139;4.28e-07;24!CL:0000860;9.47e-07;33!CL:0002057;9.47e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.72e-09,36;CL:0000473,1.70e-08,48;CL:0000234,1.70e-08,48;CL:0000557,1.88e-08,67;CL:0002194,3.39e-08,59;CL:0000576,3.39e-08,59;CL:0000040,3.39e-08,59;CL:0000559,3.39e-08,59;CL:0000839,5.92e-08,66;CL:0002009,5.95e-08,61;CL:0002139,4.14e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.85e-27!115;UBERON:0000468!3.94e-27!659;UBERON:0000467!4.72e-23!625;UBERON:0000480!1.02e-22!626;UBERON:0000922!3.05e-22!612;UBERON:0002050!5.98e-22!605;UBERON:0005423!5.98e-22!605;UBERON:0000923!1.97e-21!604;UBERON:0005291!1.97e-21!604;UBERON:0006598!1.97e-21!604;UBERON:0002532!1.97e-21!604;UBERON:0000025!6.96e-21!194;UBERON:0001049!1.46e-19!57;UBERON:0005068!1.46e-19!57;UBERON:0006241!1.46e-19!57;UBERON:0007135!1.46e-19!57;UBERON:0002616!5.61e-19!59;UBERON:0004111!3.30e-18!241;UBERON:0001017!1.28e-17!82;UBERON:0005743!1.39e-17!86;UBERON:0000477!1.87e-17!286;UBERON:0000073!2.26e-17!94;UBERON:0001016!2.26e-17!94;UBERON:0002346!7.60e-17!90;UBERON:0000955!6.70e-16!69;UBERON:0006238!6.70e-16!69;UBERON:0003075!2.33e-15!86;UBERON:0007284!2.33e-15!86;UBERON:0003080!4.43e-15!42;UBERON:0002780!1.68e-14!41;UBERON:0001890!1.68e-14!41;UBERON:0006240!1.68e-14!41;UBERON:0000062!1.18e-13!511;UBERON:0000119!2.17e-13!312;UBERON:0002020!2.29e-13!34;UBERON:0003528!2.29e-13!34;UBERON:0000483!4.64e-13!309;UBERON:0001893!4.95e-13!34;UBERON:0002791!8.70e-13!33;UBERON:0001869!5.72e-12!32;UBERON:0004872!1.10e-11!84;UBERON:0003056!1.21e-10!61;UBERON:0003081!5.04e-10!216;UBERON:0002204!6.38e-10!167;UBERON:0002049!1.09e-09!79;UBERON:0007798!1.09e-09!79;UBERON:0002619!2.00e-09!22;UBERON:0000033!3.92e-09!123;UBERON:0001981!4.28e-09!60;UBERON:0007500!4.28e-09!60;UBERON:0004537!4.28e-09!60;UBERON:0006965!4.28e-09!60;UBERON:0000055!4.61e-09!69;UBERON:0000153!5.03e-09!129;UBERON:0007811!5.03e-09!129;UBERON:0000956!7.91e-09!25;UBERON:0000203!7.91e-09!25;UBERON:0000924!9.82e-09!173;UBERON:0006601!9.82e-09!173;UBERON:0001950!1.82e-08!20;UBERON:0002405!1.90e-08!115;UBERON:0003914!2.06e-08!118;UBERON:0001009!8.43e-08!113;UBERON:0000481!8.49e-08!347;UBERON:0004121!8.78e-08!169;UBERON:0000475!2.03e-07!365;UBERON:0004535!3.13e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;9.13e-12;34!UBERON:0002020;9.13e-12;34!UBERON:0001893;1.82e-11;34!UBERON:0002791;2.20e-11;32!UBERON:0001869;3.88e-11;32!UBERON:0002780;4.67e-11;41!UBERON:0001890;4.67e-11;41!UBERON:0000073;1.51e-10;53!UBERON:0002616;1.51e-10;53!UBERON:0002619;1.35e-09;22!UBERON:0000956;5.02e-09;25!UBERON:0000203;5.02e-09;25!UBERON:0001950;1.29e-08;20!UBERON:0007023;4.39e-08;114!UBERON:0001017;1.02e-07;75!UBERON:0000955;2.83e-07;68!UBERON:0001016;3.37e-07;83 | |||
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| |||
|short_description=p1@RGL1 | |||
}} |
Latest revision as of 04:00, 19 September 2015
Short description: | p1@RGL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGL1_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000360851_5end |
EntrezGene: | RGL1 |
HGNC: | 30281 |
UniProt: | Q9NZL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.72e-09 | 36 |
defensive cell | 1.70e-08 | 48 |
phagocyte | 1.70e-08 | 48 |
granulocyte monocyte progenitor cell | 1.88e-08 | 67 |
monopoietic cell | 3.39e-08 | 59 |
monocyte | 3.39e-08 | 59 |
monoblast | 3.39e-08 | 59 |
promonocyte | 3.39e-08 | 59 |
myeloid lineage restricted progenitor cell | 5.92e-08 | 66 |
macrophage dendritic cell progenitor | 5.95e-08 | 61 |
endothelial cell of vascular tree | 4.14e-07 | 24 |