FFCP PHASE1:Hg19::chr10:73587869..73587888,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5660 | |EntrezGene=5660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9498 | |HGNC=9498 | ||
|TSSclassifier=strong | |||
|UniProt=P07602 | |UniProt=P07602 | ||
|association_with_transcript=19bp_to_M12710_5end | |association_with_transcript=19bp_to_M12710_5end | ||
|cluster_id=chr10:73587869..73587888,- | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_10_at_PSAP_5end | |description=CAGE_peak_10_at_PSAP_5end | ||
|id=chr10:73587869..73587888,- | |id=chr10:73587869..73587888,- | ||
|ontology_enrichment_celltype=CL:0002057!1.61e-26!42;CL:0000766!4.49e-25!76;CL:0002194!8.68e-25!63;CL:0000576!8.68e-25!63;CL:0000040!8.68e-25!63;CL:0000559!8.68e-25!63;CL:0000860!8.37e-23!45;CL:0000839!9.15e-23!70;CL:0002009!1.23e-22!65;CL:0000557!1.02e-20!71;CL:0000763!3.29e-10!112;CL:0000049!3.29e-10!112 | |ontology_enrichment_celltype=CL:0002057!1.61e-26!42;CL:0000766!4.49e-25!76;CL:0002194!8.68e-25!63;CL:0000576!8.68e-25!63;CL:0000040!8.68e-25!63;CL:0000559!8.68e-25!63;CL:0000860!8.37e-23!45;CL:0000839!9.15e-23!70;CL:0002009!1.23e-22!65;CL:0000557!1.02e-20!71;CL:0000763!3.29e-10!112;CL:0000049!3.29e-10!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.89e-30;39!CL:0000234;2.89e-30;39!CL:0000860;5.29e-30;33!CL:0002057;5.29e-30;33!CL:0000576;6.33e-26;48!CL:0000766;2.28e-18;69!CL:0000763;2.58e-08;100!CL:0000235;1.03e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.68e-47,48;CL:0000234,1.68e-47,48;CL:0002194,1.05e-45,59;CL:0000576,1.05e-45,59;CL:0000040,1.05e-45,59;CL:0000559,1.05e-45,59;CL:0000766,1.13e-43,72;CL:0002009,1.96e-43,61;CL:0000860,3.69e-41,42;CL:0002057,3.69e-41,42;CL:0000839,9.37e-40,66;CL:0000557,8.24e-39,67;CL:0000763,2.09e-23,108;CL:0000049,2.09e-23,108;CL:0000738,7.63e-15,136;CL:0002087,1.38e-14,115;CL:0002031,2.30e-12,120;CL:0000037,1.91e-09,168;CL:0002393,2.65e-09,9;CL:0002397,2.65e-09,9;CL:0000988,7.77e-09,177;CL:0002032,9.49e-09,161;CL:0000837,9.49e-09,161;CL:0000235,1.33e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.06e-29;42!CL:0000049;7.94e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.46e-18!80;UBERON:0002193!1.01e-16!112;UBERON:0002390!9.12e-16!102;UBERON:0003061!9.12e-16!102;UBERON:0001474!2.97e-15!86;UBERON:0002405!4.34e-14!115;UBERON:0004765!4.39e-14!101;UBERON:0001434!4.39e-14!101;UBERON:0003081!1.08e-09!216;UBERON:0000062!3.23e-09!511;UBERON:0000467!3.94e-08!625;UBERON:0000480!6.63e-08!626;UBERON:0000468!7.20e-08!659;UBERON:0002204!3.43e-07!167;UBERON:0000923!3.51e-07!604;UBERON:0005291!3.51e-07!604;UBERON:0006598!3.51e-07!604;UBERON:0002532!3.51e-07!604;UBERON:0002050!3.66e-07!605;UBERON:0005423!3.66e-07!605;UBERON:0000922!8.99e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.54e-35,76;UBERON:0001474,7.31e-31,82;UBERON:0002390,4.53e-30,98;UBERON:0003061,4.53e-30,98;UBERON:0004765,1.42e-29,90;UBERON:0002193,6.61e-29,108;UBERON:0002405,1.13e-28,93;UBERON:0001434,3.18e-27,100;UBERON:0003081,2.85e-23,203;UBERON:0002204,1.03e-15,167;UBERON:0000926,5.82e-14,315;UBERON:0004120,5.82e-14,315;UBERON:0006603,5.82e-14,315 | |||
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|short_description=p10@PSAP | |short_description=p10@PSAP | ||
}} | }} |
Latest revision as of 04:06, 19 September 2015
Short description: | p10@PSAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PSAP_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 19bp_to_M12710_5end |
EntrezGene: | PSAP |
HGNC: | 9498 |
UniProt: | P07602 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.68e-47 | 48 |
phagocyte | 1.68e-47 | 48 |
monopoietic cell | 1.05e-45 | 59 |
monocyte | 1.05e-45 | 59 |
monoblast | 1.05e-45 | 59 |
promonocyte | 1.05e-45 | 59 |
myeloid leukocyte | 1.13e-43 | 72 |
macrophage dendritic cell progenitor | 1.96e-43 | 61 |
classical monocyte | 3.69e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.69e-41 | 42 |
myeloid lineage restricted progenitor cell | 9.37e-40 | 66 |
granulocyte monocyte progenitor cell | 8.24e-39 | 67 |
myeloid cell | 2.09e-23 | 108 |
common myeloid progenitor | 2.09e-23 | 108 |
leukocyte | 7.63e-15 | 136 |
nongranular leukocyte | 1.38e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 2.30e-12 | 120 |
hematopoietic stem cell | 1.91e-09 | 168 |
intermediate monocyte | 2.65e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.65e-09 | 9 |
hematopoietic cell | 7.77e-09 | 177 |
hematopoietic oligopotent progenitor cell | 9.49e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.49e-09 | 161 |
macrophage | 1.33e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.54e-35 | 76 |
bone element | 7.31e-31 | 82 |
hematopoietic system | 4.53e-30 | 98 |
blood island | 4.53e-30 | 98 |
skeletal element | 1.42e-29 | 90 |
hemolymphoid system | 6.61e-29 | 108 |
immune system | 1.13e-28 | 93 |
skeletal system | 3.18e-27 | 100 |
lateral plate mesoderm | 2.85e-23 | 203 |
musculoskeletal system | 1.03e-15 | 167 |
mesoderm | 5.82e-14 | 315 |
mesoderm-derived structure | 5.82e-14 | 315 |
presumptive mesoderm | 5.82e-14 | 315 |