FFCP PHASE1:Hg19::chr4:89205879..89205911,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152926 | |EntrezGene=152926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25415 | |HGNC=25415 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N3J5 | |UniProt=Q8N3J5 | ||
|association_with_transcript=0bp_to_ENST00000295908,ENST00000315194,NM_152542,uc003hrm.3,uc003hrn.2,uc010ikp.1_5end | |association_with_transcript=0bp_to_ENST00000295908,ENST00000315194,NM_152542,uc003hrm.3,uc003hrn.2,uc010ikp.1_5end | ||
|cluster_id=chr4:89205879..89205911,- | |||
|coexpression_cluster_id=C1115 | |||
|description=CAGE_peak_3_at_PPM1K_5end | |description=CAGE_peak_3_at_PPM1K_5end | ||
|id=chr4:89205879..89205911,- | |id=chr4:89205879..89205911,- | ||
|ontology_enrichment_celltype=CL:0000542!3.10e-27!53;CL:0000051!3.10e-27!53;CL:0000838!5.26e-27!52;CL:0000037!8.57e-25!172;CL:0000566!8.57e-25!172;CL:0000738!1.35e-22!140;CL:0000988!2.72e-22!182;CL:0002032!1.08e-21!165;CL:0000837!1.08e-21!165;CL:0002087!6.37e-19!119;CL:0002031!4.54e-18!124;CL:0000084!1.07e-13!25;CL:0000827!1.07e-13!25;CL:0000791!1.11e-12!18;CL:0000789!1.11e-12!18;CL:0002420!1.11e-12!18;CL:0002419!1.11e-12!18;CL:0000790!1.11e-12!18;CL:0000945!1.12e-12!24;CL:0000826!1.12e-12!24;CL:0000236!1.19e-09!14;CL:0000625!2.25e-08!11 | |ontology_enrichment_celltype=CL:0000542!3.10e-27!53;CL:0000051!3.10e-27!53;CL:0000838!5.26e-27!52;CL:0000037!8.57e-25!172;CL:0000566!8.57e-25!172;CL:0000738!1.35e-22!140;CL:0000988!2.72e-22!182;CL:0002032!1.08e-21!165;CL:0000837!1.08e-21!165;CL:0002087!6.37e-19!119;CL:0002031!4.54e-18!124;CL:0000084!1.07e-13!25;CL:0000827!1.07e-13!25;CL:0000791!1.11e-12!18;CL:0000789!1.11e-12!18;CL:0002420!1.11e-12!18;CL:0002419!1.11e-12!18;CL:0000790!1.11e-12!18;CL:0000945!1.12e-12!24;CL:0000826!1.12e-12!24;CL:0000236!1.19e-09!14;CL:0000625!2.25e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.68e-21;53!CL:0000791;1.95e-19;18!CL:0000789;1.95e-19;18!CL:0002419;1.95e-19;18!CL:0000084;5.24e-19;25!CL:0000945;6.23e-16;24!CL:0000625;1.50e-12;11!CL:0000236;2.08e-12;13!CL:0000624;3.11e-08;6!CL:0002087;8.36e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.54e-37,53;CL:0000051,2.54e-37,53;CL:0000838,6.25e-37,52;CL:0000738,1.09e-24,136;CL:0000037,4.16e-21,168;CL:0002087,3.28e-20,115;CL:0000988,4.28e-20,177;CL:0000791,2.21e-19,18;CL:0000789,2.21e-19,18;CL:0002420,2.21e-19,18;CL:0002419,2.21e-19,18;CL:0000790,2.21e-19,18;CL:0000084,5.51e-19,25;CL:0000827,5.51e-19,25;CL:0002031,8.82e-18,120;CL:0002032,2.63e-17,161;CL:0000837,2.63e-17,161;CL:0000945,4.08e-16,24;CL:0000826,4.08e-16,24;CL:0000236,3.18e-13,14;CL:0000625,1.76e-12,11;CL:0000624,2.99e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000051;2.68e-21;53!CL:0000790;1.95e-19;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-32!115;UBERON:0001049!5.56e-17!57;UBERON:0005068!5.56e-17!57;UBERON:0006241!5.56e-17!57;UBERON:0007135!5.56e-17!57;UBERON:0003080!2.56e-15!42;UBERON:0002780!3.14e-15!41;UBERON:0001890!3.14e-15!41;UBERON:0006240!3.14e-15!41;UBERON:0002616!1.95e-14!59;UBERON:0000955!1.45e-12!69;UBERON:0006238!1.45e-12!69;UBERON:0002020!2.63e-12!34;UBERON:0003528!2.63e-12!34;UBERON:0001893!4.69e-12!34;UBERON:0002791!9.12e-12!33;UBERON:0001869!1.13e-11!32;UBERON:0001017!2.83e-11!82;UBERON:0005743!4.37e-10!86;UBERON:0000073!2.90e-09!94;UBERON:0001016!2.90e-09!94;UBERON:0002619!5.29e-09!22;UBERON:0003075!1.22e-08!86;UBERON:0007284!1.22e-08!86;UBERON:0001950!1.68e-08!20;UBERON:0000956!2.50e-08!25;UBERON:0000203!2.50e-08!25;UBERON:0000178!4.40e-08!15;UBERON:0000179!4.40e-08!15;UBERON:0000463!4.40e-08!15;UBERON:0002346!3.09e-07!90;UBERON:0003056!5.15e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.79e-15;41!UBERON:0001890;3.79e-15;41!UBERON:0000073;2.81e-14;53!UBERON:0002616;2.81e-14;53!UBERON:0003528;5.28e-14;34!UBERON:0002020;5.28e-14;34!UBERON:0001893;8.77e-14;34!UBERON:0002791;1.16e-13;32!UBERON:0001869;1.34e-13;32!UBERON:0001950;1.21e-12;20!UBERON:0002619;2.07e-12;22!UBERON:0000178;5.62e-11;15!UBERON:0000179;5.62e-11;15!UBERON:0000463;5.62e-11;15!UBERON:0000956;3.01e-10;25!UBERON:0000203;3.01e-10;25!UBERON:0000955;1.30e-09;68!UBERON:0002390;4.15e-09;32!UBERON:0007023;7.72e-09;114!UBERON:0001017;1.02e-08;75!UBERON:0000125;2.97e-08;9!UBERON:0002308;2.97e-08;9!UBERON:0002420;5.45e-08;9!UBERON:0007245;5.45e-08;9!UBERON:0010009;5.45e-08;9!UBERON:0010011;5.45e-08;9!UBERON:0000454;5.45e-08;9!UBERON:0001016;3.40e-07;83!UBERON:0009663;5.23e-07;7!UBERON:0001894;8.77e-07;7 | |||
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|phase1_expression=0.181678379270557,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.376627918784408,2.59805579543034,2.29881650459848,2.44003422072406,1.96682138424452,4.60595277716655,1.23852898652861,0,0,0.369754010166788,2.86628642147116,2.70121541726101,1.46800219667424,0.553995408531877,3.20871115952227,2.60413044859022,0.895661896959697,1.29557466407592,1.28787783817093,0.290796477559129,0.377875943688809,0,0.232429036905685,0.822335776043652,0.309706370895104,0.575384784644301,0.256160706529101,0,1.03423704220986,0.645484683583826,1.35426486594342,0,0,0.449446968890169,2.14258724659632,1.92557416245656,0.639337125799041,0,0,0.426224750532694,0.870627715885752,1.13477044938228,1.24564449799115,0,0,0,1.81619850790011,1.84138817993782,1.58231193720442,0.211255286311942,0.212604299965044,0.419317291016752,0.336985893439485,0.600707571366025,0.64290234678832,0.570025487482497,0.59675003159727,0.365328307529268,12.3197371122926,8.19207916893197,14.2321480618169,11.0949857867292,11.6114836240444,6.8970292794538,9.91567309177293,13.3567525634951,23.9069447025968,14.0936925449025,20.2604810906371,6.60856642895129,1.68152568894461,1.58030450865046,15.9334913792205,16.5064520354649,17.4761274149583,6.8546463110178,18.5775691981147,19.4113600351241,31.1722765452658,6.57321695622524,11.7842362989935,11.7412964129319,16.2482318259009,8.58211842162024,9.88451041455075,4.93313713811028,5.80335037350282,5.21645554323094,16.7563816373128,20.3331029348182,31.360657141493,4.75899239329778,16.8617017184845,17.5249997196141,16.1932602892482,9.2383970153988,9.11516835398986,12.3558765778289,8.2816315492775,8.44711633619161,11.2437653897111,9.23431282971666,8.21127996921047,9.87873041801189,10.1627274397733,15.2065624076939,0,0,0,0,0,0,0,0,0,0,0.087834785693126,2.48860243445654,0,0,0.649094787309367,0.522389211897802,0.531831842075461,11.6860405909618,15.4438625910635,13.0010125465348,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0.183201743930407,1.31780417436063,0,0,0,0.12663051166458,0.397227542439656,0.573673241497627,0.709336764396714,0,0,0,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.103325781175765,2.37600571456411,0.741800787835671,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0,0,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0,0.252433774244115,0,0,0,0.10075209822764,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,1.32438929824395,0.245976877086227,0.171567810298526,0.219500570817251,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0.93733833986777,0.335964256397719,0,0,0.290633938513962,0,2.46331618947972,0.176096868026452,0.621984346622316,1.29707958075265,1.13618190083742,0.571481048629521,0.763976851116555,0,1.71072446022705,0.205654985406647,0.300343057843917,1.14330573052231,0,0,0,0.258543431515556,0,0.845302752556,0,1.04007436911366,0,1.41849132023278,0,0,0.542621605391443,0,0,0.710783897485092,0,0.301439377059586,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0.205476322550383,0.179060963239896,1.34502172792233,6.69904584686553,9.05635814409973,7.9572682493444,0,1.30139853857622,0,2.01019518401218,0,0.749007023947182,0,1.24324654030811,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0,0,0,6.82334486205528,8.84428223356329,5.33637789017222,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.384417447767103,0.511707249066704,0.482561763430822,0,0.308419387605311,0,0,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0.114814448164607,0,0,0,0.385076685522074,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0.254876273045038,0.831076008928724,0,1.09629938322967,0.522870902049801,0,0,0,0.515205058238611,0.27470839445503,0.082509499920588,0,0,0,0.096670718292122,0,0,0.275673144969061,0.322260734604821,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0,0,0.616067160352178,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.353437207037059,0.202182481573316,0,0,0,0.974853958525138,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0,0.0982490410131212,0,0.709522128141196,0,0.329294892959902,0,0,0.192444225451024,0,0,0.282431402330337,0.43050537267123,0,0,0.689170200620878,1.01489521846434,4.58782324285425,7.40541343326411,5.00286728461357,6.58179636937911,1.94541993357815,3.24018862342869,7.9312517629427,0,0,0,1.30062222588003,0.721346064882224,3.77051769746595,1.91311527274587,0.199579371432817,1.34053759092657,0.63502074817164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| ||
|short_description=p3@PPM1K | |short_description=p3@PPM1K | ||
}} | }} |
Latest revision as of 07:28, 19 September 2015
Short description: | p3@PPM1K |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPM1K_5end |
Coexpression cluster: | C1115_CD4_CD34_CD8_CD19_Basophils_Peripheral_Dendritic |
Association with transcript: | 0bp_to_ENST00000295908, ENST00000315194, NM_152542, uc003hrm.3, uc003hrn.2, uc010ikp.1_5end |
EntrezGene: | PPM1K |
HGNC: | 25415 |
UniProt: | Q8N3J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.54e-37 | 53 |
common lymphoid progenitor | 2.54e-37 | 53 |
lymphoid lineage restricted progenitor cell | 6.25e-37 | 52 |
leukocyte | 1.09e-24 | 136 |
hematopoietic stem cell | 4.16e-21 | 168 |
nongranular leukocyte | 3.28e-20 | 115 |
hematopoietic cell | 4.28e-20 | 177 |
mature alpha-beta T cell | 2.21e-19 | 18 |
alpha-beta T cell | 2.21e-19 | 18 |
immature T cell | 2.21e-19 | 18 |
mature T cell | 2.21e-19 | 18 |
immature alpha-beta T cell | 2.21e-19 | 18 |
T cell | 5.51e-19 | 25 |
pro-T cell | 5.51e-19 | 25 |
hematopoietic lineage restricted progenitor cell | 8.82e-18 | 120 |
hematopoietic oligopotent progenitor cell | 2.63e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.63e-17 | 161 |
lymphocyte of B lineage | 4.08e-16 | 24 |
pro-B cell | 4.08e-16 | 24 |
B cell | 3.18e-13 | 14 |
CD8-positive, alpha-beta T cell | 1.76e-12 | 11 |
CD4-positive, alpha-beta T cell | 2.99e-08 | 6 |