FFCP PHASE1:Hg19::chr17:29624272..29624319,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4974 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8135 | |||
|TSSclassifier=strong | |||
|UniProt=P23515 | |||
|association_with_transcript=29bp_to_ENST00000247271_5end | |||
|cluster_id=chr17:29624272..29624319,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_OMG_5end | |||
|id=chr17:29624272..29624319,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.36e-23;82!UBERON:0006241;9.09e-10;3!UBERON:0003057;9.09e-10;3!UBERON:0006215;1.61e-09;3!UBERON:0010122;3.16e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.11e-93!57;UBERON:0005068!3.11e-93!57;UBERON:0006241!3.11e-93!57;UBERON:0007135!3.11e-93!57;UBERON:0001017!1.84e-86!82;UBERON:0005743!6.70e-85!86;UBERON:0000073!1.79e-78!94;UBERON:0001016!1.79e-78!94;UBERON:0002616!3.67e-78!59;UBERON:0002780!5.63e-74!41;UBERON:0001890!5.63e-74!41;UBERON:0006240!5.63e-74!41;UBERON:0000955!1.62e-73!69;UBERON:0006238!1.62e-73!69;UBERON:0003080!5.51e-72!42;UBERON:0003075!2.39e-65!86;UBERON:0007284!2.39e-65!86;UBERON:0007023!3.49e-65!115;UBERON:0002020!1.33e-62!34;UBERON:0003528!1.33e-62!34;UBERON:0001893!1.39e-62!34;UBERON:0002346!8.22e-62!90;UBERON:0002791!2.54e-60!33;UBERON:0001869!6.33e-58!32;UBERON:0003056!3.93e-49!61;UBERON:0002619!1.31e-48!22;UBERON:0001950!6.58e-44!20;UBERON:0000956!3.34e-42!25;UBERON:0000203!3.34e-42!25;UBERON:0000033!3.13e-39!123;UBERON:0004121!1.50e-38!169;UBERON:0000924!2.66e-37!173;UBERON:0006601!2.66e-37!173;UBERON:0000153!9.13e-37!129;UBERON:0007811!9.13e-37!129;UBERON:0002420!5.26e-22!9;UBERON:0007245!5.26e-22!9;UBERON:0010009!5.26e-22!9;UBERON:0010011!5.26e-22!9;UBERON:0000454!5.26e-22!9;UBERON:0002308!7.76e-22!9;UBERON:0000125!7.76e-22!9;UBERON:0003076!3.21e-21!15;UBERON:0003057!3.21e-21!15;UBERON:0000025!8.27e-20!194;UBERON:0009663!1.93e-17!7;UBERON:0004732!3.02e-17!13;UBERON:0000200!1.14e-15!6;UBERON:0004733!3.07e-15!12;UBERON:0002028!3.07e-15!12;UBERON:0007277!3.07e-15!12;UBERON:0001871!3.29e-15!7;UBERON:0002298!6.18e-15!8;UBERON:0004111!7.27e-15!241;UBERON:0000064!1.89e-14!219;UBERON:0000349!4.22e-13!5;UBERON:0002021!1.09e-12!5;UBERON:0000477!1.80e-12!286;UBERON:0001872!1.85e-12!5;UBERON:0001894!2.00e-12!7;UBERON:0006222!2.00e-12!7;UBERON:0000483!3.65e-11!309;UBERON:0000119!6.38e-11!312;UBERON:0000369!1.87e-10!4;UBERON:0002435!1.87e-10!4;UBERON:0000204!1.87e-10!4;UBERON:0010082!1.87e-10!4;UBERON:0000062!2.02e-10!511;UBERON:0000475!1.54e-09!365;UBERON:0002680!1.73e-09!9;UBERON:0001895!1.73e-09!9;UBERON:0010092!1.73e-09!9;UBERON:0002771!4.76e-09!3;UBERON:0000988!1.52e-08!3;UBERON:0006331!1.81e-08!3;UBERON:0005383!3.09e-08!3;UBERON:0005382!3.09e-08!3;UBERON:0001896!5.13e-08!3;UBERON:0005290!5.13e-08!3;UBERON:0010096!5.13e-08!3;UBERON:0002240!5.38e-08!3;UBERON:0000481!6.03e-08!347;UBERON:0000922!1.15e-07!612;UBERON:0000923!1.80e-07!604;UBERON:0005291!1.80e-07!604;UBERON:0006598!1.80e-07!604;UBERON:0002532!1.80e-07!604;UBERON:0002050!1.99e-07!605;UBERON:0005423!1.99e-07!605;UBERON:0000467!4.11e-07!625;UBERON:0000480!4.52e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.98e-68;34!UBERON:0003528;4.30e-67;34!UBERON:0002020;4.30e-67;34!UBERON:0002791;3.65e-66;32!UBERON:0001869;5.26e-66;32!UBERON:0002780;1.68e-63;41!UBERON:0001890;1.68e-63;41!UBERON:0002619;7.35e-62;22!UBERON:0000073;2.50e-60;53!UBERON:0002616;2.50e-60;53!UBERON:0001950;7.69e-56;20!UBERON:0000956;5.34e-54;25!UBERON:0000203;5.34e-54;25!UBERON:0001017;5.11e-43;75!UBERON:0000955;1.22e-41;68!UBERON:0001016;8.68e-38;83!UBERON:0002420;1.13e-27;9!UBERON:0007245;1.13e-27;9!UBERON:0010009;1.13e-27;9!UBERON:0010011;1.13e-27;9!UBERON:0000454;1.13e-27;9!UBERON:0000125;1.95e-27;9!UBERON:0002308;1.95e-27;9!UBERON:0004732;6.80e-22;13!UBERON:0009663;7.89e-22;7!UBERON:0000200;1.44e-19;6!UBERON:0004733;2.57e-19;12!UBERON:0002028;2.57e-19;12!UBERON:0007023;9.17e-19;114!UBERON:0002298;1.49e-18;6!UBERON:0000349;2.80e-16;5!UBERON:0001871;4.16e-16;6!UBERON:0002021;9.42e-16;5!UBERON:0001872;1.82e-15;5!UBERON:0011216;9.29e-15;132!UBERON:0002784;6.16e-13;4!UBERON:0000369;6.66e-13;4!UBERON:0002435;6.66e-13;4!UBERON:0000204;6.66e-13;4!UBERON:0002680;6.23e-12;9!UBERON:0001895;6.23e-12;9!UBERON:0001894;2.48e-11;7!UBERON:0001870;6.85e-11;3!UBERON:0000988;1.84e-10;3!UBERON:0010314;2.45e-10;132!UBERON:0005383;4.36e-10;3!UBERON:0005382;4.36e-10;3!UBERON:0001896;8.17e-10;3!UBERON:0005290;8.17e-10;3!UBERON:0002240;9.09e-10;3!UBERON:0005174;9.09e-10;3!UBERON:0001137;9.09e-10;3!UBERON:0002771;5.31e-08;2!UBERON:0001897;6.92e-08;2!UBERON:0010225;6.92e-08;2!UBERON:0002702;8.14e-08;2!UBERON:0001954;1.32e-07;2!UBERON:0003022;1.32e-07;2!UBERON:0002421;1.32e-07;2!UBERON:0002600;1.32e-07;2!UBERON:0001875;1.34e-07;2!UBERON:0006514;1.34e-07;2!UBERON:0001876;1.53e-07;2!UBERON:0002148;2.66e-07;2!UBERON:0006331;2.66e-07;2!UBERON:0009662;2.66e-07;2!UBERON:0001873;3.16e-07;2!UBERON:0005162;3.16e-07;2!UBERON:0000122;3.16e-07;2!UBERON:0002360;8.78e-07;2!UBERON:0000094;8.78e-07;2!UBERON:0010743;8.78e-07;2!UBERON:0001905;9.61e-07;2!UBERON:0002757;9.61e-07;2!UBERON:0010134;9.61e-07;2!UBERON:0005408;9.61e-07;2!UBERON:0001899;9.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.68e-117,56;UBERON:0005068,1.68e-117,56;UBERON:0006241,1.68e-117,56;UBERON:0007135,1.68e-117,56;UBERON:0000073,6.34e-109,53;UBERON:0002616,6.34e-109,53;UBERON:0001017,1.55e-106,81;UBERON:0001016,1.25e-98,89;UBERON:0000955,1.86e-93,68;UBERON:0006238,1.86e-93,68;UBERON:0002780,5.49e-90,41;UBERON:0001890,5.49e-90,41;UBERON:0003080,5.49e-90,41;UBERON:0006240,5.49e-90,41;UBERON:0003075,5.79e-84,82;UBERON:0007284,5.79e-84,82;UBERON:0003528,3.78e-80,34;UBERON:0002020,3.78e-80,34;UBERON:0001893,3.99e-80,34;UBERON:0002346,1.56e-79,86;UBERON:0002791,2.36e-74,32;UBERON:0001869,3.76e-74,32;UBERON:0003056,9.11e-65,61;UBERON:0010371,8.99e-64,104;UBERON:0002619,7.46e-62,22;UBERON:0007023,1.55e-60,114;UBERON:0001950,7.81e-56,20;UBERON:0000956,5.41e-54,25;UBERON:0000203,5.41e-54,25;UBERON:0010314,2.82e-52,132;UBERON:0004121,7.15e-48,171;UBERON:0000924,7.15e-48,171;UBERON:0006601,7.15e-48,171;UBERON:0011216,1.03e-39,223;UBERON:0002420,1.15e-27,9;UBERON:0007245,1.15e-27,9;UBERON:0010009,1.15e-27,9;UBERON:0010011,1.15e-27,9;UBERON:0000454,1.15e-27,9;UBERON:0000025,1.59e-27,192;UBERON:0000125,1.89e-27,9;UBERON:0002308,1.89e-27,9;UBERON:0003076,5.48e-27,15;UBERON:0003057,5.48e-27,15;UBERON:0004732,6.80e-22,13;UBERON:0009663,7.89e-22,7;UBERON:0004111,1.23e-19,240;UBERON:0000200,1.44e-19,6;UBERON:0004733,2.54e-19,12;UBERON:0002028,2.54e-19,12;UBERON:0007277,2.54e-19,12;UBERON:0002298,1.49e-18,6;UBERON:0000349,2.76e-16,5;UBERON:0001871,4.27e-16,6;UBERON:0002021,9.28e-16,5;UBERON:0001872,1.82e-15,5;UBERON:0000483,1.45e-14,306;UBERON:0000119,2.64e-14,309;UBERON:0002784,6.16e-13,4;UBERON:0000369,6.55e-13,4;UBERON:0002435,6.55e-13,4;UBERON:0000204,6.55e-13,4;UBERON:0010082,6.55e-13,4;UBERON:0002680,6.05e-12,9;UBERON:0001895,6.05e-12,9;UBERON:0010092,6.05e-12,9;UBERON:0001894,2.48e-11,7;UBERON:0006222,2.48e-11,7;UBERON:0001870,6.85e-11,3;UBERON:0000988,1.79e-10,3;UBERON:0005383,4.42e-10,3;UBERON:0005382,4.42e-10,3;UBERON:0001896,8.42e-10,3;UBERON:0005290,8.42e-10,3;UBERON:0010096,8.42e-10,3;UBERON:0002240,8.95e-10,3;UBERON:0005174,8.95e-10,3;UBERON:0001137,8.95e-10,3;UBERON:0000923,6.55e-09,560;UBERON:0010316,6.55e-09,560;UBERON:0005291,6.55e-09,560;UBERON:0006598,6.55e-09,560;UBERON:0010317,6.55e-09,560;UBERON:0002532,6.55e-09,560;UBERON:0002050,9.53e-09,564;UBERON:0000922,2.81e-08,592;UBERON:0005423,4.43e-08,581;UBERON:0002771,5.31e-08,2;UBERON:0001897,6.92e-08,2;UBERON:0010225,6.92e-08,2;UBERON:0002702,8.14e-08,2;UBERON:0001954,1.32e-07,2;UBERON:0003022,1.32e-07,2;UBERON:0002421,1.32e-07,2;UBERON:0002600,1.32e-07,2;UBERON:0001875,1.37e-07,2;UBERON:0006514,1.37e-07,2;UBERON:0001876,1.55e-07,2;UBERON:0002148,2.58e-07,2;UBERON:0006331,2.58e-07,2;UBERON:0009662,2.58e-07,2;UBERON:0001873,3.21e-07,2;UBERON:0005162,3.21e-07,2;UBERON:0000122,3.21e-07,2;UBERON:0010122,3.21e-07,2;UBERON:0002360,9.05e-07,2;UBERON:0000094,9.05e-07,2;UBERON:0010743,9.05e-07,2;UBERON:0001905,9.61e-07,2;UBERON:0002757,9.61e-07,2;UBERON:0010134,9.61e-07,2;UBERON:0005408,9.61e-07,2;UBERON:0001899,9.61e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.98972360536047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28685161800217,2.60279707715243,0,1.17261385734044,0.637938751653163,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,122.280160675255,108.174781219684,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,31.018647875047,171.342677304939,7.98455192004777,0,0,0,0,0,0,0,0,0,102.746000754405,70.4283201572382,47.3003382582958,53.6309410666439,31.6235952280296,75.9073474152745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,88.2280830717063,0,164.453640899188,0,0,0,0,0,10.4064738954367,2.21153028699708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,6.10148000107438,0,0,152.135842681977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,112.87901427744,123.488651760578,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,104.970319054828,134.432761832125,0,0,0,0,0,76.483691832453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.7333204241843,102.876964155813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,131.138090635114,192.435419750396,166.253555978232,51.0334184164163,90.4071770025346,58.4327151678418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,177.523832018822,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,90.9485827365867,191.29037803954,123.716240769292,116.71121125299,3.52900374710405,37.3449163306777,122.560015034575,78.5231811425349,0,0,0,0,0,0,0,0,0,0,0,0,0,90.8380513117408,111.69416810178,157.495338933902,73.6891714453197,4.92277328116398,0,0,0,0,12.8568440610789,26.9026977775059,0.606965604236632,0,0,0,0,178.420549064183,57.8800407353072,0,0,0.078493092850514,92.5410824605251,0,1.82631744101899,0,0,11.650676700795,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0,0,0,0,84.0200239251966,71.2911360785006,38.8843269376728,0,0,0,0,0,0,0,0,0,146.20637481448,0.157771562193185,38.0752345069122,8.72701380680755,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,1.07185652062471,127.692093676652,196.005527158291,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@OMG | |||
}} |
Latest revision as of 11:00, 19 September 2015
Short description: | p1@OMG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OMG_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 29bp_to_ENST00000247271_5end |
EntrezGene: | OMG |
HGNC: | 8135 |
UniProt: | P23515 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data