FFCP PHASE1:Hg19::chr18:40857389..40857405,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6860 | |EntrezGene=6860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11512 | |HGNC=11512 | ||
|TSSclassifier=strong | |||
|UniProt=F5GY31 | |UniProt=F5GY31 | ||
|association_with_transcript=-48bp_to_ENST00000442661_5end | |association_with_transcript=-48bp_to_ENST00000442661_5end | ||
|cluster_id=chr18:40857389..40857405,- | |||
|coexpression_cluster_id=C759 | |coexpression_cluster_id=C759 | ||
|description=CAGE_peak_3_at_SYT4_5end | |description=CAGE_peak_3_at_SYT4_5end | ||
|id=chr18:40857389..40857405,- | |id=chr18:40857389..40857405,- | ||
|ontology_enrichment_celltype=CL:0000047!6.95e-12!8;CL:0000540!3.06e-09!6;CL:0000031!3.06e-09!6;CL:0000404!3.06e-09!6 | |ontology_enrichment_celltype=CL:0000047!6.95e-12!8;CL:0000540!3.06e-09!6;CL:0000031!3.06e-09!6;CL:0000404!3.06e-09!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.50e-21;82!UBERON:0006215;2.91e-09;3 | |||
|ontology_enrichment_disease=DOID:171!1.17e-07!10;DOID:169!4.39e-07!6 | |ontology_enrichment_disease=DOID:171!1.17e-07!10;DOID:169!4.39e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:171;3.05e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.91e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.12e-73!94;UBERON:0001016!1.12e-73!94;UBERON:0001017!1.28e-72!82;UBERON:0005743!1.09e-70!86;UBERON:0001049!1.60e-67!57;UBERON:0005068!1.60e-67!57;UBERON:0006241!1.60e-67!57;UBERON:0007135!1.60e-67!57;UBERON:0002616!1.44e-56!59;UBERON:0000955!1.23e-54!69;UBERON:0006238!1.23e-54!69;UBERON:0002780!1.33e-54!41;UBERON:0001890!1.33e-54!41;UBERON:0006240!1.33e-54!41;UBERON:0003080!5.07e-53!42;UBERON:0002346!4.93e-48!90;UBERON:0003075!7.43e-47!86;UBERON:0007284!7.43e-47!86;UBERON:0007023!6.43e-44!115;UBERON:0002020!1.31e-43!34;UBERON:0003528!1.31e-43!34;UBERON:0001893!1.65e-43!34;UBERON:0002791!8.59e-42!33;UBERON:0001869!3.70e-41!32;UBERON:0000924!2.54e-38!173;UBERON:0006601!2.54e-38!173;UBERON:0004121!6.17e-37!169;UBERON:0003056!1.99e-36!61;UBERON:0002619!2.53e-35!22;UBERON:0001950!2.84e-32!20;UBERON:0000956!2.28e-30!25;UBERON:0000203!2.28e-30!25;UBERON:0000033!1.15e-28!123;UBERON:0000153!1.43e-26!129;UBERON:0007811!1.43e-26!129;UBERON:0003076!4.35e-15!15;UBERON:0003057!4.35e-15!15;UBERON:0002420!9.26e-15!9;UBERON:0007245!9.26e-15!9;UBERON:0010009!9.26e-15!9;UBERON:0010011!9.26e-15!9;UBERON:0000454!9.26e-15!9;UBERON:0002308!1.19e-14!9;UBERON:0000125!1.19e-14!9;UBERON:0000025!4.01e-14!194;UBERON:0004732!1.86e-12!13;UBERON:0001894!2.21e-12!7;UBERON:0006222!2.21e-12!7;UBERON:0009663!1.27e-11!7;UBERON:0000200!1.72e-11!6;UBERON:0004733!3.24e-11!12;UBERON:0002028!3.24e-11!12;UBERON:0007277!3.24e-11!12;UBERON:0001871!6.26e-11!7;UBERON:0004111!1.53e-10!241;UBERON:0002298!7.21e-10!8;UBERON:0002021!8.37e-10!5;UBERON:0001872!9.83e-10!5;UBERON:0000349!1.58e-09!5;UBERON:0003296!1.46e-08!4;UBERON:0010133!1.46e-08!4;UBERON:0000369!5.77e-08!4;UBERON:0002435!5.77e-08!4;UBERON:0000204!5.77e-08!4;UBERON:0010082!5.77e-08!4;UBERON:0000922!1.54e-07!612;UBERON:0002680!2.32e-07!9;UBERON:0001895!2.32e-07!9;UBERON:0010092!2.32e-07!9;UBERON:0000064!3.74e-07!219;UBERON:0000477!4.44e-07!286;UBERON:0000923!4.47e-07!604;UBERON:0005291!4.47e-07!604;UBERON:0006598!4.47e-07!604;UBERON:0002532!4.47e-07!604;UBERON:0002050!5.06e-07!605;UBERON:0005423!5.06e-07!605;UBERON:0000483!7.43e-07!309 | |ontology_enrichment_uberon=UBERON:0000073!1.12e-73!94;UBERON:0001016!1.12e-73!94;UBERON:0001017!1.28e-72!82;UBERON:0005743!1.09e-70!86;UBERON:0001049!1.60e-67!57;UBERON:0005068!1.60e-67!57;UBERON:0006241!1.60e-67!57;UBERON:0007135!1.60e-67!57;UBERON:0002616!1.44e-56!59;UBERON:0000955!1.23e-54!69;UBERON:0006238!1.23e-54!69;UBERON:0002780!1.33e-54!41;UBERON:0001890!1.33e-54!41;UBERON:0006240!1.33e-54!41;UBERON:0003080!5.07e-53!42;UBERON:0002346!4.93e-48!90;UBERON:0003075!7.43e-47!86;UBERON:0007284!7.43e-47!86;UBERON:0007023!6.43e-44!115;UBERON:0002020!1.31e-43!34;UBERON:0003528!1.31e-43!34;UBERON:0001893!1.65e-43!34;UBERON:0002791!8.59e-42!33;UBERON:0001869!3.70e-41!32;UBERON:0000924!2.54e-38!173;UBERON:0006601!2.54e-38!173;UBERON:0004121!6.17e-37!169;UBERON:0003056!1.99e-36!61;UBERON:0002619!2.53e-35!22;UBERON:0001950!2.84e-32!20;UBERON:0000956!2.28e-30!25;UBERON:0000203!2.28e-30!25;UBERON:0000033!1.15e-28!123;UBERON:0000153!1.43e-26!129;UBERON:0007811!1.43e-26!129;UBERON:0003076!4.35e-15!15;UBERON:0003057!4.35e-15!15;UBERON:0002420!9.26e-15!9;UBERON:0007245!9.26e-15!9;UBERON:0010009!9.26e-15!9;UBERON:0010011!9.26e-15!9;UBERON:0000454!9.26e-15!9;UBERON:0002308!1.19e-14!9;UBERON:0000125!1.19e-14!9;UBERON:0000025!4.01e-14!194;UBERON:0004732!1.86e-12!13;UBERON:0001894!2.21e-12!7;UBERON:0006222!2.21e-12!7;UBERON:0009663!1.27e-11!7;UBERON:0000200!1.72e-11!6;UBERON:0004733!3.24e-11!12;UBERON:0002028!3.24e-11!12;UBERON:0007277!3.24e-11!12;UBERON:0001871!6.26e-11!7;UBERON:0004111!1.53e-10!241;UBERON:0002298!7.21e-10!8;UBERON:0002021!8.37e-10!5;UBERON:0001872!9.83e-10!5;UBERON:0000349!1.58e-09!5;UBERON:0003296!1.46e-08!4;UBERON:0010133!1.46e-08!4;UBERON:0000369!5.77e-08!4;UBERON:0002435!5.77e-08!4;UBERON:0000204!5.77e-08!4;UBERON:0010082!5.77e-08!4;UBERON:0000922!1.54e-07!612;UBERON:0002680!2.32e-07!9;UBERON:0001895!2.32e-07!9;UBERON:0010092!2.32e-07!9;UBERON:0000064!3.74e-07!219;UBERON:0000477!4.44e-07!286;UBERON:0000923!4.47e-07!604;UBERON:0005291!4.47e-07!604;UBERON:0006598!4.47e-07!604;UBERON:0002532!4.47e-07!604;UBERON:0002050!5.06e-07!605;UBERON:0005423!5.06e-07!605;UBERON:0000483!7.43e-07!309 | ||
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|short_description=p3@SYT4 | |short_description=p3@SYT4 | ||
}} | }} |
Latest revision as of 13:48, 19 September 2015
Short description: | p3@SYT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYT4_5end |
Coexpression cluster: | C759_nonsmall_gastrointestinal_occipital_pineal_cerebellum_small_argyrophil |
Association with transcript: | -48bp_to_ENST00000442661_5end |
EntrezGene: | SYT4 |
HGNC: | 11512 |
UniProt: | F5GY31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.91e-08 | 10 |