FFCP PHASE1:Hg19::chr14:27067411..27067418,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7886 | |||
|TSSclassifier=strong | |||
|UniProt=P51513,D3DS81 | |||
|association_with_transcript=-451bp_to_ENST00000539517,NM_002515,NM_006489,NM_006491,uc001wpy.2,uc001wpz.2,uc001wqa.2,uc001wqb.2_5end | |||
|cluster_id=chr14:27067411..27067418,- | |||
|coexpression_cluster_id=C3419 | |||
|description=CAGE_peak_13_at_NOVA1_5end | |||
|id=chr14:27067411..27067418,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;5.67e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.10e-16;82!UBERON:0006241;1.21e-09;3!UBERON:0003057;1.21e-09;3!UBERON:0010122;4.96e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.58e-38!94;UBERON:0001016!6.58e-38!94;UBERON:0001049!2.53e-36!57;UBERON:0005068!2.53e-36!57;UBERON:0006241!2.53e-36!57;UBERON:0007135!2.53e-36!57;UBERON:0005743!3.61e-36!86;UBERON:0001017!2.24e-35!82;UBERON:0007023!1.06e-32!115;UBERON:0003075!2.76e-32!86;UBERON:0007284!2.76e-32!86;UBERON:0002346!1.19e-31!90;UBERON:0002616!1.78e-30!59;UBERON:0000955!3.51e-28!69;UBERON:0006238!3.51e-28!69;UBERON:0003080!5.26e-26!42;UBERON:0003056!1.44e-25!61;UBERON:0004121!2.45e-25!169;UBERON:0000924!2.63e-25!173;UBERON:0006601!2.63e-25!173;UBERON:0002780!3.38e-25!41;UBERON:0001890!3.38e-25!41;UBERON:0006240!3.38e-25!41;UBERON:0000153!5.88e-24!129;UBERON:0007811!5.88e-24!129;UBERON:0000033!7.21e-24!123;UBERON:0002020!5.63e-22!34;UBERON:0003528!5.63e-22!34;UBERON:0001893!6.29e-22!34;UBERON:0002791!4.83e-21!33;UBERON:0001869!4.53e-20!32;UBERON:0001950!1.95e-17!20;UBERON:0002619!3.54e-17!22;UBERON:0000956!4.08e-14!25;UBERON:0000203!4.08e-14!25;UBERON:0000483!1.77e-13!309;UBERON:0000119!5.52e-13!312;UBERON:0000475!6.29e-13!365;UBERON:0000477!4.69e-12!286;UBERON:0004111!1.00e-11!241;UBERON:0000025!1.61e-11!194;UBERON:0003076!2.58e-11!15;UBERON:0003057!2.58e-11!15;UBERON:0000481!6.10e-10!347;UBERON:0002308!9.25e-10!9;UBERON:0000125!9.25e-10!9;UBERON:0000922!1.41e-09!612;UBERON:0002420!1.72e-09!9;UBERON:0007245!1.72e-09!9;UBERON:0010009!1.72e-09!9;UBERON:0010011!1.72e-09!9;UBERON:0000454!1.72e-09!9;UBERON:0000468!1.84e-09!659;UBERON:0004732!2.02e-09!13;UBERON:0002298!7.90e-09!8;UBERON:0004733!1.20e-08!12;UBERON:0002028!1.20e-08!12;UBERON:0007277!1.20e-08!12;UBERON:0001871!2.57e-08!7;UBERON:0002050!7.26e-08!605;UBERON:0005423!7.26e-08!605;UBERON:0009663!7.52e-08!7;UBERON:0000923!1.51e-07!604;UBERON:0005291!1.51e-07!604;UBERON:0006598!1.51e-07!604;UBERON:0002532!1.51e-07!604;UBERON:0000467!1.94e-07!625;UBERON:0000064!1.97e-07!219;UBERON:0000480!2.43e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.75e-53;34!UBERON:0003528;4.67e-52;34!UBERON:0002020;4.67e-52;34!UBERON:0002791;1.73e-51;32!UBERON:0001869;2.40e-51;32!UBERON:0002780;3.05e-50;41!UBERON:0001890;3.05e-50;41!UBERON:0000073;2.61e-46;53!UBERON:0002616;2.61e-46;53!UBERON:0002619;4.25e-46;22!UBERON:0001950;1.43e-45;20!UBERON:0000956;4.01e-40;25!UBERON:0000203;4.01e-40;25!UBERON:0001017;5.06e-33;75!UBERON:0001016;4.55e-28;83!UBERON:0000955;1.30e-26;68!UBERON:0000125;2.22e-25;9!UBERON:0002308;2.22e-25;9!UBERON:0002420;6.59e-20;9!UBERON:0007245;6.59e-20;9!UBERON:0010009;6.59e-20;9!UBERON:0010011;6.59e-20;9!UBERON:0000454;6.59e-20;9!UBERON:0009663;8.89e-20;7!UBERON:0002298;8.49e-18;6!UBERON:0004732;5.10e-17;13!UBERON:0007023;4.34e-15;114!UBERON:0002021;6.11e-15;5!UBERON:0004733;6.96e-15;12!UBERON:0002028;6.96e-15;12!UBERON:0001871;1.43e-14;6!UBERON:0001872;1.60e-14;5!UBERON:0000200;3.24e-12;6!UBERON:0000369;1.02e-11;4!UBERON:0002435;1.02e-11;4!UBERON:0000204;1.02e-11;4!UBERON:0011216;7.92e-11;132!UBERON:0000988;5.39e-10;3!UBERON:0002240;1.21e-09;3!UBERON:0005174;1.21e-09;3!UBERON:0001137;1.21e-09;3!UBERON:0001896;1.62e-09;3!UBERON:0005290;1.62e-09;3!UBERON:0005383;2.23e-09;3!UBERON:0005382;2.23e-09;3!UBERON:0002680;2.63e-08;9!UBERON:0001895;2.63e-08;9!UBERON:0010314;4.61e-08;132!UBERON:0002148;2.65e-07;2!UBERON:0006331;2.65e-07;2!UBERON:0009662;2.65e-07;2!UBERON:0001873;4.96e-07;2!UBERON:0001875;6.01e-07;2!UBERON:0006514;6.01e-07;2!UBERON:0002771;8.06e-07;2!UBERON:0005162;8.06e-07;2!UBERON:0000122;8.06e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.69e-90,56;UBERON:0005068,1.69e-90,56;UBERON:0006241,1.69e-90,56;UBERON:0007135,1.69e-90,56;UBERON:0000073,2.56e-82,53;UBERON:0002616,2.56e-82,53;UBERON:0001017,6.90e-74,81;UBERON:0003075,2.20e-70,82;UBERON:0007284,2.20e-70,82;UBERON:0001016,2.58e-68,89;UBERON:0002780,5.90e-68,41;UBERON:0001890,5.90e-68,41;UBERON:0003080,5.90e-68,41;UBERON:0006240,5.90e-68,41;UBERON:0000955,2.29e-67,68;UBERON:0006238,2.29e-67,68;UBERON:0002346,1.45e-66,86;UBERON:0003528,9.70e-64,34;UBERON:0002020,9.70e-64,34;UBERON:0001893,1.36e-63,34;UBERON:0002791,3.99e-58,32;UBERON:0001869,5.55e-58,32;UBERON:0010371,5.52e-53,104;UBERON:0003056,8.86e-52,61;UBERON:0002619,5.69e-46,22;UBERON:0001950,1.83e-45,20;UBERON:0007023,7.45e-45,114;UBERON:0010314,5.48e-43,132;UBERON:0000956,5.17e-40,25;UBERON:0000203,5.17e-40,25;UBERON:0004121,8.75e-38,171;UBERON:0000924,8.75e-38,171;UBERON:0006601,8.75e-38,171;UBERON:0000125,6.26e-26,9;UBERON:0002308,6.26e-26,9;UBERON:0000025,1.78e-25,192;UBERON:0011216,1.07e-24,223;UBERON:0003076,1.96e-22,15;UBERON:0003057,1.96e-22,15;UBERON:0004111,6.08e-21,240;UBERON:0002420,2.46e-20,9;UBERON:0007245,2.46e-20,9;UBERON:0010009,2.46e-20,9;UBERON:0010011,2.46e-20,9;UBERON:0000454,2.46e-20,9;UBERON:0009663,3.00e-20,7;UBERON:0002298,5.82e-18,6;UBERON:0004732,3.28e-17,13;UBERON:0004733,4.49e-15,12;UBERON:0002028,4.49e-15,12;UBERON:0007277,4.49e-15,12;UBERON:0002021,6.65e-15,5;UBERON:0001872,1.05e-14,5;UBERON:0000483,1.20e-14,306;UBERON:0000119,2.21e-14,309;UBERON:0001871,3.31e-14,6;UBERON:0000200,3.13e-12,6;UBERON:0000369,5.37e-12,4;UBERON:0002435,5.37e-12,4;UBERON:0000204,5.37e-12,4;UBERON:0010082,5.37e-12,4;UBERON:0000988,4.97e-10,3;UBERON:0002240,7.10e-10,3;UBERON:0005174,7.10e-10,3;UBERON:0001137,7.10e-10,3;UBERON:0001896,1.20e-09,3;UBERON:0005290,1.20e-09,3;UBERON:0010096,1.20e-09,3;UBERON:0005383,1.81e-09,3;UBERON:0005382,1.81e-09,3;UBERON:0002680,2.14e-08,9;UBERON:0001895,2.14e-08,9;UBERON:0010092,2.14e-08,9;UBERON:0002050,1.69e-07,564;UBERON:0002148,2.22e-07,2;UBERON:0006331,2.22e-07,2;UBERON:0009662,2.22e-07,2;UBERON:0000923,4.14e-07,560;UBERON:0010316,4.14e-07,560;UBERON:0005291,4.14e-07,560;UBERON:0006598,4.14e-07,560;UBERON:0010317,4.14e-07,560;UBERON:0002532,4.14e-07,560;UBERON:0001875,4.18e-07,2;UBERON:0006514,4.18e-07,2;UBERON:0001873,5.29e-07,2;UBERON:0010122,5.29e-07,2;UBERON:0005423,7.58e-07,581;UBERON:0005162,7.75e-07,2;UBERON:0000122,7.75e-07,2;UBERON:0001894,9.44e-07,7;UBERON:0006222,9.44e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,2.61185628199839,0,0,0,0,0.495065411840187,0.662794751455832,0,0,0,0,0.738726348460727,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.567208902984407,0.221729397462564,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.417989933073621,0,0.35576626268671,0,0,0,0,0,0,0.357198913136319,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0.311211035399766,0,0.163461903113459,1.05950199351452,0,0.234321431833797,0.624320153660641,0.570471821544449,0.597794722207204,0.117434498643765,0,0.140450806702248,1.02077085627447,0.122834317311768,1.13658359293342,0,0,0.910161361938026,0,0.168336113954066,0.375355559615893,0.554128230968366,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0.365921118388786,0.662648841607426,0.348581828608555,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.651616610620649,0,1.44331342025273,0.927443239800615,0.352226082707465,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,1.77866236955724,6.50699269288109,0,0.670065061337395,0.637938751653163,0,0,0,0.613457458595699,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.574890092096664,0,0.116210378459959,0,0,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0,0.429680979473094,0.435050081742686,0.170453254832202,0.356128142586949,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0.235624804691373,0.404364963146632,0,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0,0,0,0,0.876901770507525,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0.658589785919804,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0.994147647766298,3.51673541026282,0.111308705022906,0,0.422250816255987,0.996239941255349,0,0,0.511343412510774,0.492339221844278,0,0,0,0,0.493217028184668,0,0,0,1.94813006139888,0,0,0.524759999977174,1.44999915086959,0,0.254253650292766,0,0.344743373241465,0,0.694499979733169,2.65722415744152,2.41192877250816,0,16.9186267694774,1.77328571372128,1.09692698576986,0,0,0.846452843541768,0.113942055847001,0,0,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,4.32777279484182,0,0.530745387020035,0,0.296521128680622,0.123563938946503,0.417687798021821,3.57226004797588,0.802577647298789,1.87411556580271,0,0,0,0,1.20990716048664,3.36680037793539,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.698906672968121,0,0,0,0,0.387956065953678,0.176512253383001,0.451961481561065,0,0,1.64608069485285,0,0,0.426905989478705,0,0,0,2.57392496792947,0,0.49701014226173,0,0,0,0,0.288950589901519,1.80126086612937,5.20240439789574,0,0.859530882839914,0.525774708558629,0,1.3749625440701,0,0,0.858452096273142,0.446342914883745,1.14211903227435,0,0,0,0,0,1.08270229666224,0,0,4.22230558945884,0.321506296930038,0.137539436597234,0.83088067605837,0,0,1.64023802976667,0,0.315222829196793,0.629455057619977,0.211200673038813,0,0,0.714695326373367,0,0,0.542999601753713,0,0,0,0,0,0,0,0,2.84422503995411,5.15707146796491,0.171086837884329,0,0.213574825135389,1.25763444079733,0,0,0,0,0,2.72008901684737,0.7520696820681,1.83807346058077,1.63936315354902,0.157054096250234,0,1.09823638411767,4.63206443614049,1.72022758707021,3.32787154610557,2.73224172942087,0.691743174681154,0.124980407962107,0,0,0,0.936669811613763,0,0.149254802886874,0,0,0.378806010550178,0.754703705257725,0.889811221596536,0,0.453692771289717,0.15543720058278,0.147855149989634,0,0,0,1.24411862352257,0,0,0,0.380805212168795,0.406870733204662,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0.489473409012935,0,0,0,0,0.192914038270915,0,0.256241518587947,0,0,3.45646090379327,0,0,0,0,0.491545817507439,0,0.79994958341972,0,0,0,0.184105950251841,0,0,0.895260599125562,0.107824811396682,0.157265941855896,0.655257829152084,0,0.212574920101683,0,0,0,0,0,0,0,1.86264752779733,2.8339315265117,4.94864963077169,1.43581454968528,2.01657356977374,2.42050383624763,1.29180516505481,1.42769420259154,0,0.11796972334774,0,0,0,0,0,0.376051641746286,0.20170506870352,0,0,0,0,2.566428215499,1.56215619722769,3.51367554052013,2.53663240775627,2.18789923607288,0.548257766857182,0.496211178389294,0.351742488719241,0.383287282918786,0.535701835878287,0.336283722218824,1.82089681270989,1.13831095675649,0,0,0,2.44691038716594,1.90741043332262,0.354581522651905,0.111231401892069,0.706437835654626,1.72827148907602,0,0,0.215927591218621,0,1.50100742770978,0,0.929931402945002,0.173858272302579,0,0,0,0,0,0.236664001461131,0.255640214277473,1.27016115057279,0,0,0,0.223710863595585,0,0,0,0.410651227424988,0,0.971421986118279,0,0,0,0,0.329821550236287,0.603851374266694,0.154348316215889,0.437119121007915,0,0,0.471353094203252,1.96308467114945,5.64388160621463,2.5359343655004,0,0.0939839179798536,0.128915775947154,0,0.178553938605658,0,0,0.730336388246517,0.458729283404541,3.58348957878628,0,1.15585533324555,0.436350690340377,0.5290268405154,0,0.462175628631418,0.432626562123789,0,0,0.380095503034311,0,0,0,0,0.530450887527676,0,0,4.75791780964718,0.852935927603924,0.476128862927481,0,0.248298857183432,0.112131862580613,0.190941474834495,0,0.653150243690884,0,0.80822463617505,0.502055437748735,0.332660356546013,0,0.106727345877715,0,0,0,0.733448665097199,1.22068853494722,0.665756774185513,0.603821380773079,0 | |||
|short_description=p13@NOVA1 | |||
}} |
Latest revision as of 15:54, 19 September 2015
Short description: | p13@NOVA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NOVA1_5end |
Coexpression cluster: | C3419_cerebellum_colon_medial_parietal_middle_occipital_testis |
Association with transcript: | -451bp_to_ENST00000539517, NM_002515, NM_006489, NM_006491, uc001wpy.2, uc001wpz.2, uc001wqa.2, uc001wqb.2_5end |
EntrezGene: | NOVA1 |
HGNC: | 7886 |
UniProt: | P51513D3DS81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data