FFCP PHASE1:Hg19::chr10:83634940..83634989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10718 | |EntrezGene=10718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7999 | |HGNC=7999 | ||
|TSSclassifier=strong | |||
|UniProt=B9EGV5,P56975,B3KVG8 | |UniProt=B9EGV5,P56975,B3KVG8 | ||
|association_with_transcript=-80bp_to_ENST00000372141,NM_001010848,NM_001165972,uc001kco.2,uc010qlz.1_5end | |association_with_transcript=-80bp_to_ENST00000372141,NM_001010848,NM_001165972,uc001kco.2,uc010qlz.1_5end | ||
|cluster_id=chr10:83634940..83634989,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_NRG3_5end | |description=CAGE_peak_1_at_NRG3_5end | ||
|id=chr10:83634940..83634989,+ | |id=chr10:83634940..83634989,+ | ||
|ontology_enrichment_celltype=CL:0000148;4.26e-10;10!CL:0000147;9.53e-10;14!CL:0002139;1.90e-07;24 | |ontology_enrichment_celltype=CL:0000148!1.38e-08!10;CL:0000541!1.38e-08!10;CL:0002139!2.16e-08!24;CL:0000147!7.25e-08!14;CL:0000115!2.39e-07!35 | ||
| | |ontology_enrichment_celltype_v019=CL:0000148;4.26e-10;10!CL:0000147;9.53e-10;14!CL:0002139;1.90e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.20e-10,10;CL:0000541,2.20e-10,10;CL:0000147,4.31e-10,14;CL:0002139,2.13e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.09e-17;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001869;1.36e-44;32!UBERON:0003528;1.51e-44;34!UBERON:0002020;1.51e-44;34!UBERON:0001893;1.85e-44;34!UBERON:0002791;1.97e-44;32!UBERON:0002780;1.87e-41;41!UBERON:0001890;1.87e-41;41!UBERON:0000956;4.16e-39;25!UBERON:0000203;4.16e-39;25!UBERON:0002619;1.03e-36;22!UBERON:0000073;1.88e-36;53!UBERON:0002616;1.88e-36;53!UBERON:0001950;1.86e-33;20!UBERON:0000955;8.63e-26;68!UBERON:0001017;1.06e-23;75!UBERON:0001016;4.34e-22;83!UBERON:0002420;2.55e-14;9!UBERON:0007245;2.55e-14;9!UBERON:0010009;2.55e-14;9!UBERON:0010011;2.55e-14;9!UBERON:0000454;2.55e-14;9!UBERON:0000125;4.01e-14;9!UBERON:0002308;4.01e-14;9!UBERON:0001871;3.16e-12;6!UBERON:0009663;3.11e-11;7!UBERON:0007023;6.78e-11;114!UBERON:0000200;1.03e-10;6!UBERON:0004732;1.86e-10;13!UBERON:0002298;6.34e-10;6!UBERON:0004733;1.30e-09;12!UBERON:0002028;1.30e-09;12!UBERON:0000349;2.23e-09;5!UBERON:0001872;2.72e-09;5!UBERON:0002021;3.76e-09;5!UBERON:0011216;4.48e-09;132!UBERON:0001894;1.53e-07;7!UBERON:0000369;2.48e-07;4!UBERON:0002435;2.48e-07;4!UBERON:0000204;2.48e-07;4!UBERON:0002784;6.30e-07;4 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.36e-44;32!UBERON:0003528;1.51e-44;34!UBERON:0002020;1.51e-44;34!UBERON:0001893;1.85e-44;34!UBERON:0002791;1.97e-44;32!UBERON:0002780;1.87e-41;41!UBERON:0001890;1.87e-41;41!UBERON:0000956;4.16e-39;25!UBERON:0000203;4.16e-39;25!UBERON:0002619;1.03e-36;22!UBERON:0000073;1.88e-36;53!UBERON:0002616;1.88e-36;53!UBERON:0001950;1.86e-33;20!UBERON:0000955;8.63e-26;68!UBERON:0001017;1.06e-23;75!UBERON:0001016;4.34e-22;83!UBERON:0002420;2.55e-14;9!UBERON:0007245;2.55e-14;9!UBERON:0010009;2.55e-14;9!UBERON:0010011;2.55e-14;9!UBERON:0000454;2.55e-14;9!UBERON:0000125;4.01e-14;9!UBERON:0002308;4.01e-14;9!UBERON:0001871;3.16e-12;6!UBERON:0009663;3.11e-11;7!UBERON:0007023;6.78e-11;114!UBERON:0000200;1.03e-10;6!UBERON:0004732;1.86e-10;13!UBERON:0002298;6.34e-10;6!UBERON:0004733;1.30e-09;12!UBERON:0002028;1.30e-09;12!UBERON:0000349;2.23e-09;5!UBERON:0001872;2.72e-09;5!UBERON:0002021;3.76e-09;5!UBERON:0011216;4.48e-09;132!UBERON:0001894;1.53e-07;7!UBERON:0000369;2.48e-07;4!UBERON:0002435;2.48e-07;4!UBERON:0000204;2.48e-07;4!UBERON:0002784;6.30e-07;4 | |||
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| ||
|short_description=p1@NRG3 | |short_description=p1@NRG3 | ||
}} | }} |
Latest revision as of 16:05, 19 September 2015
Short description: | p1@NRG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NRG3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -80bp_to_ENST00000372141, NM_001010848, NM_001165972, uc001kco.2, uc010qlz.1_5end |
EntrezGene: | NRG3 |
HGNC: | 7999 |
UniProt: | B9EGV5P56975B3KVG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.20e-10 | 10 |
melanoblast | 2.20e-10 | 10 |
pigment cell | 4.31e-10 | 14 |
endothelial cell of vascular tree | 2.13e-07 | 24 |