FFCP PHASE1:Hg19::chr14:33408493..33408525,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64067 | |EntrezGene=64067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19311 | |HGNC=19311 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IXF0,C9J403 | |UniProt=Q8IXF0,C9J403 | ||
|association_with_transcript=0bp_to_ENST00000356141,ENST00000357798_5end | |association_with_transcript=0bp_to_ENST00000356141,ENST00000357798_5end | ||
|cluster_id=chr14:33408493..33408525,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_NPAS3_5end | |description=CAGE_peak_4_at_NPAS3_5end | ||
|id=chr14:33408493..33408525,+ | |id=chr14:33408493..33408525,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.41e-17;82!UBERON:0006241;4.71e-10;3!UBERON:0003057;4.71e-10;3!UBERON:0002532;6.07e-07;206!UBERON:0010316;6.07e-07;206!UBERON:0010122;6.10e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.62e-49!115;UBERON:0001049!9.84e-44!57;UBERON:0005068!9.84e-44!57;UBERON:0006241!9.84e-44!57;UBERON:0007135!9.84e-44!57;UBERON:0005743!1.93e-43!86;UBERON:0001017!1.95e-43!82;UBERON:0000073!3.03e-41!94;UBERON:0001016!3.03e-41!94;UBERON:0000955!1.10e-38!69;UBERON:0006238!1.10e-38!69;UBERON:0002346!2.46e-37!90;UBERON:0002616!5.83e-37!59;UBERON:0003075!5.31e-36!86;UBERON:0007284!5.31e-36!86;UBERON:0002780!5.39e-34!41;UBERON:0001890!5.39e-34!41;UBERON:0006240!5.39e-34!41;UBERON:0003080!7.87e-33!42;UBERON:0002020!2.14e-27!34;UBERON:0003528!2.14e-27!34;UBERON:0001893!2.31e-27!34;UBERON:0000153!2.14e-26!129;UBERON:0007811!2.14e-26!129;UBERON:0002791!2.65e-26!33;UBERON:0000924!3.95e-26!173;UBERON:0006601!3.95e-26!173;UBERON:0000033!8.57e-26!123;UBERON:0003056!2.50e-25!61;UBERON:0001869!4.40e-25!32;UBERON:0004121!7.66e-25!169;UBERON:0000956!8.68e-18!25;UBERON:0000203!8.68e-18!25;UBERON:0002619!1.77e-17!22;UBERON:0001950!1.33e-15!20;UBERON:0003076!9.59e-12!15;UBERON:0003057!9.59e-12!15;UBERON:0002308!1.83e-11!9;UBERON:0000125!1.83e-11!9;UBERON:0000475!2.46e-10!365;UBERON:0004732!1.10e-09!13;UBERON:0009663!3.50e-09!7;UBERON:0002420!8.59e-09!9;UBERON:0007245!8.59e-09!9;UBERON:0010009!8.59e-09!9;UBERON:0010011!8.59e-09!9;UBERON:0000454!8.59e-09!9;UBERON:0000064!1.11e-08!219;UBERON:0004733!1.18e-08!12;UBERON:0002028!1.18e-08!12;UBERON:0007277!1.18e-08!12;UBERON:0002298!4.60e-08!8;UBERON:0001894!4.75e-08!7;UBERON:0006222!4.75e-08!7;UBERON:0000477!6.82e-08!286;UBERON:0000200!6.93e-08!6;UBERON:0000025!7.77e-08!194;UBERON:0000062!1.33e-07!511;UBERON:0000483!2.95e-07!309;UBERON:0000119!5.72e-07!312;UBERON:0004111!6.56e-07!241;UBERON:0000468!7.91e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.40e-47;34!UBERON:0002780;3.49e-45;41!UBERON:0001890;3.49e-45;41!UBERON:0000073;2.27e-44;53!UBERON:0002616;2.27e-44;53!UBERON:0003528;4.05e-44;34!UBERON:0002020;4.05e-44;34!UBERON:0002791;1.28e-43;32!UBERON:0001869;1.55e-43;32!UBERON:0002619;1.16e-35;22!UBERON:0001950;6.49e-35;20!UBERON:0000956;5.56e-31;25!UBERON:0000203;5.56e-31;25!UBERON:0001017;3.11e-28;75!UBERON:0000955;4.43e-28;68!UBERON:0000125;3.77e-26;9!UBERON:0002308;3.77e-26;9!UBERON:0001016;2.64e-22;83!UBERON:0009663;1.75e-20;7!UBERON:0002420;4.17e-20;9!UBERON:0007245;4.17e-20;9!UBERON:0010009;4.17e-20;9!UBERON:0010011;4.17e-20;9!UBERON:0000454;4.17e-20;9!UBERON:0002298;1.71e-18;6!UBERON:0004732;2.74e-17;13!UBERON:0000200;5.73e-17;6!UBERON:0004733;6.57e-15;12!UBERON:0002028;6.57e-15;12!UBERON:0007023;8.24e-15;114!UBERON:0000369;5.47e-12;4!UBERON:0002435;5.47e-12;4!UBERON:0000204;5.47e-12;4!UBERON:0011216;2.62e-11;132!UBERON:0001894;3.08e-10;7!UBERON:0000988;3.19e-10;3!UBERON:0002240;4.71e-10;3!UBERON:0005174;4.71e-10;3!UBERON:0001137;4.71e-10;3!UBERON:0001896;5.47e-10;3!UBERON:0005290;5.47e-10;3!UBERON:0001871;7.44e-10;6!UBERON:0002021;1.37e-09;5!UBERON:0001872;1.62e-09;5!UBERON:0005383;2.72e-09;3!UBERON:0005382;2.72e-09;3!UBERON:0001870;4.66e-09;3!UBERON:0002680;4.43e-08;9!UBERON:0001895;4.43e-08;9!UBERON:0010314;1.37e-07;132!UBERON:0001897;1.72e-07;2!UBERON:0010225;1.72e-07;2!UBERON:0002784;1.90e-07;4!UBERON:0001875;2.27e-07;2!UBERON:0006514;2.27e-07;2!UBERON:0002148;2.31e-07;2!UBERON:0006331;2.31e-07;2!UBERON:0009662;2.31e-07;2!UBERON:0005162;2.41e-07;2!UBERON:0000122;2.41e-07;2!UBERON:0001873;6.10e-07;2!UBERON:0002771;6.66e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.63e-86,56;UBERON:0005068,8.63e-86,56;UBERON:0006241,8.63e-86,56;UBERON:0007135,8.63e-86,56;UBERON:0000073,9.88e-78,53;UBERON:0002616,9.88e-78,53;UBERON:0001017,2.22e-67,81;UBERON:0003075,3.82e-67,82;UBERON:0007284,3.82e-67,82;UBERON:0000955,3.80e-64,68;UBERON:0006238,3.80e-64,68;UBERON:0002780,1.54e-63,41;UBERON:0001890,1.54e-63,41;UBERON:0003080,1.54e-63,41;UBERON:0006240,1.54e-63,41;UBERON:0002346,1.75e-63,86;UBERON:0001016,1.44e-62,89;UBERON:0007023,3.92e-55,114;UBERON:0003528,1.41e-54,34;UBERON:0002020,1.41e-54,34;UBERON:0001893,1.69e-54,34;UBERON:0010371,1.83e-50,104;UBERON:0002791,3.81e-49,32;UBERON:0001869,5.26e-49,32;UBERON:0003056,6.97e-46,61;UBERON:0010314,6.37e-41,132;UBERON:0002619,2.17e-36,22;UBERON:0001950,1.38e-35,20;UBERON:0000956,1.28e-31,25;UBERON:0000203,1.28e-31,25;UBERON:0004121,1.48e-31,171;UBERON:0000924,1.48e-31,171;UBERON:0006601,1.48e-31,171;UBERON:0000125,2.76e-26,9;UBERON:0002308,2.76e-26,9;UBERON:0011216,6.06e-26,223;UBERON:0003076,3.45e-22,15;UBERON:0003057,3.45e-22,15;UBERON:0009663,1.41e-20,7;UBERON:0002420,2.11e-20,9;UBERON:0007245,2.11e-20,9;UBERON:0010009,2.11e-20,9;UBERON:0010011,2.11e-20,9;UBERON:0000454,2.11e-20,9;UBERON:0000025,1.97e-19,192;UBERON:0002298,1.37e-18,6;UBERON:0000200,2.41e-17,6;UBERON:0004732,2.81e-17,13;UBERON:0004733,7.32e-15,12;UBERON:0002028,7.32e-15,12;UBERON:0007277,7.32e-15,12;UBERON:0004111,3.16e-14,240;UBERON:0000369,4.52e-12,4;UBERON:0002435,4.52e-12,4;UBERON:0000204,4.52e-12,4;UBERON:0010082,4.52e-12,4;UBERON:0000483,1.84e-11,306;UBERON:0000119,3.09e-11,309;UBERON:0000988,2.81e-10,3;UBERON:0001894,3.14e-10,7;UBERON:0006222,3.14e-10,7;UBERON:0001871,3.47e-10,6;UBERON:0001896,4.97e-10,3;UBERON:0005290,4.97e-10,3;UBERON:0010096,4.97e-10,3;UBERON:0002240,7.31e-10,3;UBERON:0005174,7.31e-10,3;UBERON:0001137,7.31e-10,3;UBERON:0002021,1.58e-09,5;UBERON:0001872,1.80e-09,5;UBERON:0005383,2.41e-09,3;UBERON:0005382,2.41e-09,3;UBERON:0001870,2.48e-09,3;UBERON:0002680,5.07e-08,9;UBERON:0001895,5.07e-08,9;UBERON:0010092,5.07e-08,9;UBERON:0000922,1.10e-07,592;UBERON:0002050,1.29e-07,564;UBERON:0001897,1.73e-07,2;UBERON:0010225,1.73e-07,2;UBERON:0002148,2.09e-07,2;UBERON:0005162,2.09e-07,2;UBERON:0000122,2.09e-07,2;UBERON:0006331,2.09e-07,2;UBERON:0009662,2.09e-07,2;UBERON:0001875,2.22e-07,2;UBERON:0006514,2.22e-07,2;UBERON:0002784,2.84e-07,4;UBERON:0000923,3.14e-07,560;UBERON:0010316,3.14e-07,560;UBERON:0005291,3.14e-07,560;UBERON:0006598,3.14e-07,560;UBERON:0010317,3.14e-07,560;UBERON:0002532,3.14e-07,560;UBERON:0002771,3.93e-07,2;UBERON:0005423,5.87e-07,581;UBERON:0001873,7.98e-07,2;UBERON:0010122,7.98e-07,2;UBERON:0002702,8.46e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,1.25381888591235,0,0.410623275218653,0.502170558379211,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0.221729397462564,0.175669571386252,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,1.30139853857622,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0.892144943985809,0.473107245101804,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0.364182336013434,0.262248829918848,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0.183138929636687,0,0,0,0,0.193341436584244,0,0,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0.121360521749513,0,0,0.23874448473769,0,0,0,1.96937182974718,0.222617410045812,0,0.211125408127993,0.597743964753209,1.38141957765574,0.503865495708552,0.818149460017238,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,2.90799823828566,2.22643435588443,0,1.5625665665114,0.0874599999961957,0,0,0,0,0,0,0,5.31444831488303,1.32656082487949,0,0.442317039724898,1.47773809476774,0.658156191461918,0,0,1.38510465306835,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,6.67271216508703,1.60515529459758,1.63985112007737,0,0,0,2.36750641709634,0,1.22429104652196,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,1.5003541537555,1.35588444468319,0,0,1.89932387867636,0,0,0.85381197895741,0,0,0,1.54435498075768,0,0.124252535565433,0,0.271808412147228,0.104602846312333,0.305994652908965,0.577901179803038,3.60252173225874,3.14882371451584,0,0,0,1.67569440763353,1.3749625440701,0,0,0,0.223171457441873,0.403100834920358,0,0,0,0,0,0,0,0.795229689809303,2.99647493445466,0,0,0,0,0,1.94398581305679,0,0.315222829196793,0.629455057619977,0.422401346077626,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0.226624183040251,0,0,7.23984555624683,2.77688463659649,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0.5013797880454,0,0.327872630709804,0.157054096250234,1.77213635993397,4.51497180137264,2.253436752717,2.86704597845036,2.3295100822739,4.09836259413131,0,0,0.606596470166591,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0.438568099157414,0,0,0.168942440653073,0,0,0,1.93561810612423,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0.157265941855896,0,0.33946505990805,0.425149840203366,0.371807292777007,0.558644917973244,0,0,0,0.352675943690684,0.3062454773532,2.50493977876192,5.6678630530234,1.43670473151436,2.87162909937057,0.252071696221718,1.31398779682014,1.45328081068666,2.85538840518309,0,0,0,0,0.381382095467167,0,0.198916222116275,2.33152017882697,0,0,0,0,0,2.22874029240702,3.12431239445539,1.2401207790071,2.47321659756237,0,0,0.992422356778588,0,0,1.07140367175657,0.336283722218824,1.82089681270989,0.682986574053893,0.177404740325278,0,0,3.53442611479525,1.71009211263408,0,0,0.39246546425257,1.88538707899202,0,1.82631744101899,0,0,1.57248397188644,0,0.116241425368125,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0.121917924982269,0,0,1.1598144313382,0.971421986118279,0,0.198950775161368,0,0,0,0.150962843566674,0.231522474323834,1.5299169235277,0,0.980593287015622,0,6.0855624805633,2.0793248022896,2.113278637917,0,0.657887425858975,1.16024198352439,0,0.178553938605658,0,0.0802413666891683,0.730336388246517,0,3.29681041248338,0.315543124386369,1.90376172534561,1.74540276136151,2.1161073620616,0,0,0,0.126166424835079,0,0,0,0,0,0,0.303114792872958,0.535928260312357,4.97501663675268,4.03388683861391,0.639701945702943,1.90451545170992,0,0.124149428591716,0.224263725161227,0.509177266225319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| ||
|short_description=p4@NPAS3 | |short_description=p4@NPAS3 | ||
}} | }} |
Latest revision as of 18:14, 19 September 2015
Short description: | p4@NPAS3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NPAS3_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000356141, ENST00000357798_5end |
EntrezGene: | NPAS3 |
HGNC: | 19311 |
UniProt: | Q8IXF0C9J403 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data