FFCP PHASE1:Hg19::chr3:9439579..9439592,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55209 | |EntrezGene=55209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25566 | |HGNC=25566 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C0A6,F2Z2J0 | |UniProt=Q9C0A6,F2Z2J0 | ||
|association_with_transcript=0bp_to_ENST00000406341,ENST00000443339_5end | |association_with_transcript=0bp_to_ENST00000406341,ENST00000443339_5end | ||
|cluster_id=chr3:9439579..9439592,+ | |||
|description=CAGE_peak_6_at_SETD5_5end | |description=CAGE_peak_6_at_SETD5_5end | ||
|id=chr3:9439579..9439592,+ | |id=chr3:9439579..9439592,+ | ||
|ontology_enrichment_celltype=CL:0000012!4.43e-19!682;CL:0000548!2.69e-18!679;CL:0000004!2.69e-18!679;CL:0000255!2.69e-18!679;CL:0000144!1.12e-15!625;CL:0002371!3.38e-15!591;CL:0000034!3.92e-13!444;CL:0002057!4.74e-13!42;CL:0000860!7.19e-13!45;CL:0000048!8.30e-13!430;CL:0000723!1.58e-12!436;CL:0000063!1.92e-12!578;CL:0000003!3.66e-10!722;CL:0002139!8.33e-09!24;CL:0000557!2.09e-08!71;CL:0000766!4.80e-08!76;CL:0002009!6.44e-08!65;CL:0000134!7.01e-08!358;CL:0000219!2.07e-07!390;CL:0000839!2.93e-07!70;CL:0002194!3.01e-07!63;CL:0000576!3.01e-07!63;CL:0000040!3.01e-07!63;CL:0000559!3.01e-07!63;CL:0000220!3.23e-07!246;CL:0000071!3.43e-07!18;CL:0002546!3.43e-07!18;CL:0002321!5.94e-07!248;CL:0000115!8.96e-07!35 | |ontology_enrichment_celltype=CL:0000012!4.43e-19!682;CL:0000548!2.69e-18!679;CL:0000004!2.69e-18!679;CL:0000255!2.69e-18!679;CL:0000144!1.12e-15!625;CL:0002371!3.38e-15!591;CL:0000034!3.92e-13!444;CL:0002057!4.74e-13!42;CL:0000860!7.19e-13!45;CL:0000048!8.30e-13!430;CL:0000723!1.58e-12!436;CL:0000063!1.92e-12!578;CL:0000003!3.66e-10!722;CL:0002139!8.33e-09!24;CL:0000557!2.09e-08!71;CL:0000766!4.80e-08!76;CL:0002009!6.44e-08!65;CL:0000134!7.01e-08!358;CL:0000219!2.07e-07!390;CL:0000839!2.93e-07!70;CL:0002194!3.01e-07!63;CL:0000576!3.01e-07!63;CL:0000040!3.01e-07!63;CL:0000559!3.01e-07!63;CL:0000220!3.23e-07!246;CL:0000071!3.43e-07!18;CL:0002546!3.43e-07!18;CL:0002321!5.94e-07!248;CL:0000115!8.96e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.20e-18;33!CL:0002057;3.20e-18;33!CL:0000473;2.43e-11;39!CL:0000234;2.43e-11;39!CL:0002139;2.09e-10;24!CL:0000576;4.09e-09;48!CL:0000071;1.08e-08;18!CL:0000115;1.79e-07;36 | |ontology_enrichment_celltype_v019=CL:0000860;3.20e-18;33!CL:0002057;3.20e-18;33!CL:0000473;2.43e-11;39!CL:0000234;2.43e-11;39!CL:0002139;2.09e-10;24!CL:0000576;4.09e-09;48!CL:0000071;1.08e-08;18!CL:0000115;1.79e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.54e-16,42;CL:0002057,1.54e-16,42;CL:0000034,1.23e-13,441;CL:0000048,2.57e-13,427;CL:0000723,9.65e-13,433;CL:0000473,1.39e-12,48;CL:0000234,1.39e-12,48;CL:0002139,2.38e-11,24;CL:0000557,3.39e-10,67;CL:0000766,6.34e-10,72;CL:0002009,1.50e-09,61;CL:0000115,1.89e-09,36;CL:0000134,2.47e-09,354;CL:0000071,2.70e-09,18;CL:0002546,2.70e-09,18;CL:0000839,5.64e-09,66;CL:0002194,1.10e-08,59;CL:0000576,1.10e-08,59;CL:0000040,1.10e-08,59;CL:0000559,1.10e-08,59;CL:0002320,2.31e-08,361;CL:0000213,4.67e-08,58;CL:0000215,4.67e-08,58;CL:0000219,6.70e-08,386;CL:0000763,2.68e-07,108;CL:0000049,2.68e-07,108;CL:0000222,2.68e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-12;42!CL:0002546;1.08e-08;18 | |ontology_enrichment_development_v019=CL:0002057;1.28e-12;42!CL:0002546;1.08e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.22e-10!69;UBERON:0002049!7.95e-10!79;UBERON:0007798!7.95e-10!79;UBERON:0001981!1.47e-09!60;UBERON:0007500!1.47e-09!60;UBERON:0004537!1.47e-09!60;UBERON:0006965!1.47e-09!60;UBERON:0002405!2.08e-08!115;UBERON:0004535!5.06e-08!110;UBERON:0002371!8.31e-08!80;UBERON:0001474!2.01e-07!86;UBERON:0001009!2.22e-07!113;UBERON:0001986!3.43e-07!18;UBERON:0004638!3.43e-07!18;UBERON:0004852!3.43e-07!18;UBERON:0004872!4.84e-07!84;UBERON:0002384!9.02e-07!375 | |ontology_enrichment_uberon=UBERON:0000055!1.22e-10!69;UBERON:0002049!7.95e-10!79;UBERON:0007798!7.95e-10!79;UBERON:0001981!1.47e-09!60;UBERON:0007500!1.47e-09!60;UBERON:0004537!1.47e-09!60;UBERON:0006965!1.47e-09!60;UBERON:0002405!2.08e-08!115;UBERON:0004535!5.06e-08!110;UBERON:0002371!8.31e-08!80;UBERON:0001474!2.01e-07!86;UBERON:0001009!2.22e-07!113;UBERON:0001986!3.43e-07!18;UBERON:0004638!3.43e-07!18;UBERON:0004852!3.43e-07!18;UBERON:0004872!4.84e-07!84;UBERON:0002384!9.02e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.08e-08;18!UBERON:0001986;1.08e-08;18!UBERON:0004852;1.08e-08;18 | |ontology_enrichment_uberon_v019=UBERON:0004638;1.08e-08;18!UBERON:0001986;1.08e-08;18!UBERON:0004852;1.08e-08;18 | ||
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| ||
|short_description=p6@SETD5 | |short_description=p6@SETD5 | ||
}} | }} |
Latest revision as of 20:15, 19 September 2015
Short description: | p6@SETD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SETD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000406341, ENST00000443339_5end |
EntrezGene: | SETD5 |
HGNC: | 25566 |
UniProt: | Q9C0A6F2Z2J0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.54e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.54e-16 | 42 |
stem cell | 1.23e-13 | 441 |
multi fate stem cell | 2.57e-13 | 427 |
somatic stem cell | 9.65e-13 | 433 |
defensive cell | 1.39e-12 | 48 |
phagocyte | 1.39e-12 | 48 |
endothelial cell of vascular tree | 2.38e-11 | 24 |
granulocyte monocyte progenitor cell | 3.39e-10 | 67 |
myeloid leukocyte | 6.34e-10 | 72 |
macrophage dendritic cell progenitor | 1.50e-09 | 61 |
endothelial cell | 1.89e-09 | 36 |
mesenchymal cell | 2.47e-09 | 354 |
blood vessel endothelial cell | 2.70e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.70e-09 | 18 |
myeloid lineage restricted progenitor cell | 5.64e-09 | 66 |
monopoietic cell | 1.10e-08 | 59 |
monocyte | 1.10e-08 | 59 |
monoblast | 1.10e-08 | 59 |
promonocyte | 1.10e-08 | 59 |
connective tissue cell | 2.31e-08 | 361 |
lining cell | 4.67e-08 | 58 |
barrier cell | 4.67e-08 | 58 |
motile cell | 6.70e-08 | 386 |
myeloid cell | 2.68e-07 | 108 |
common myeloid progenitor | 2.68e-07 | 108 |
mesodermal cell | 2.68e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 6.64e-13 | 203 |
vessel | 1.56e-11 | 68 |
epithelial tube open at both ends | 6.93e-11 | 59 |
blood vessel | 6.93e-11 | 59 |
blood vasculature | 6.93e-11 | 59 |
vascular cord | 6.93e-11 | 59 |
vasculature | 9.13e-10 | 78 |
vascular system | 9.13e-10 | 78 |
mesoderm | 1.87e-09 | 315 |
mesoderm-derived structure | 1.87e-09 | 315 |
presumptive mesoderm | 1.87e-09 | 315 |
bone marrow | 2.62e-09 | 76 |
blood vessel endothelium | 2.70e-09 | 18 |
endothelium | 2.70e-09 | 18 |
cardiovascular system endothelium | 2.70e-09 | 18 |
cardiovascular system | 3.82e-09 | 109 |
splanchnic layer of lateral plate mesoderm | 1.02e-08 | 83 |
epithelial tube | 1.70e-08 | 117 |
circulatory system | 2.16e-08 | 112 |
artery | 3.03e-08 | 42 |
arterial blood vessel | 3.03e-08 | 42 |
arterial system | 3.03e-08 | 42 |
immune system | 3.09e-08 | 93 |
connective tissue | 3.90e-08 | 371 |
bone element | 5.76e-08 | 82 |
hemolymphoid system | 1.55e-07 | 108 |
hematopoietic system | 5.19e-07 | 98 |
blood island | 5.19e-07 | 98 |
skeletal element | 8.80e-07 | 90 |