FFCP PHASE1:Hg19::chr22:41985865..41985876,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5372 | |EntrezGene=5372 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9114 | |HGNC=9114 | ||
|TSSclassifier=strong | |||
|UniProt=A8K003,Q92871 | |UniProt=A8K003,Q92871 | ||
|association_with_transcript=0bp_to_ENST00000472620,NM_002676,uc003bal.2_5end | |association_with_transcript=0bp_to_ENST00000472620,NM_002676,uc003bal.2_5end | ||
|cluster_id=chr22:41985865..41985876,- | |||
|description=CAGE_peak_2_at_PMM1_5end | |description=CAGE_peak_2_at_PMM1_5end | ||
|id=chr22:41985865..41985876,- | |id=chr22:41985865..41985876,- | ||
|ontology_enrichment_celltype=CL:0000055!2.25e-21!180;CL:0000183!7.02e-13!59;CL:0000680!1.97e-12!57;CL:0000056!1.97e-12!57;CL:0000355!1.97e-12!57;CL:0000393!5.05e-12!60;CL:0000211!5.05e-12!60;CL:0000187!1.59e-11!54;CL:0000192!5.29e-09!42;CL:0000514!5.29e-09!42;CL:0000057!1.51e-07!75;CL:0000359!5.42e-07!32 | |ontology_enrichment_celltype=CL:0000055!2.25e-21!180;CL:0000183!7.02e-13!59;CL:0000680!1.97e-12!57;CL:0000056!1.97e-12!57;CL:0000355!1.97e-12!57;CL:0000393!5.05e-12!60;CL:0000211!5.05e-12!60;CL:0000187!1.59e-11!54;CL:0000192!5.29e-09!42;CL:0000514!5.29e-09!42;CL:0000057!1.51e-07!75;CL:0000359!5.42e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000187;3.21e-08;55!CL:0000393;1.03e-07;61!CL:0000211;1.03e-07;61!CL:0000192;6.14e-07;43!CL:0000359;6.90e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.39e-14,58;CL:0000056,1.39e-14,58;CL:0000355,1.39e-14,58;CL:0000393,8.57e-14,61;CL:0000211,8.57e-14,61;CL:0000187,2.48e-13,55;CL:0000192,2.55e-10,43;CL:0000514,2.55e-10,43;CL:0000359,5.56e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000355;8.46e-09;58!CL:0000514;6.14e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.33e-24!365;UBERON:0002616!9.69e-20!59;UBERON:0000481!2.51e-19!347;UBERON:0001017!4.10e-19!82;UBERON:0000119!9.69e-19!312;UBERON:0005743!1.02e-18!86;UBERON:0000955!2.92e-18!69;UBERON:0006238!2.92e-18!69;UBERON:0000483!3.61e-18!309;UBERON:0001049!5.84e-18!57;UBERON:0005068!5.84e-18!57;UBERON:0006241!5.84e-18!57;UBERON:0007135!5.84e-18!57;UBERON:0000073!1.97e-17!94;UBERON:0001016!1.97e-17!94;UBERON:0003075!1.18e-15!86;UBERON:0007284!1.18e-15!86;UBERON:0002020!1.19e-15!34;UBERON:0003528!1.19e-15!34;UBERON:0004121!1.46e-15!169;UBERON:0001893!1.60e-15!34;UBERON:0000924!3.78e-15!173;UBERON:0006601!3.78e-15!173;UBERON:0001869!4.14e-15!32;UBERON:0002791!5.37e-15!33;UBERON:0002346!6.99e-15!90;UBERON:0000033!1.86e-14!123;UBERON:0002780!2.05e-14!41;UBERON:0001890!2.05e-14!41;UBERON:0006240!2.05e-14!41;UBERON:0000153!1.64e-13!129;UBERON:0007811!1.64e-13!129;UBERON:0000956!1.68e-13!25;UBERON:0000203!1.68e-13!25;UBERON:0003080!1.82e-13!42;UBERON:0003056!1.83e-13!61;UBERON:0000914!2.06e-13!83;UBERON:0002329!2.06e-13!83;UBERON:0003077!2.06e-13!83;UBERON:0003059!2.06e-13!83;UBERON:0007282!2.06e-13!83;UBERON:0009618!2.06e-13!83;UBERON:0007285!2.06e-13!83;UBERON:0002619!1.52e-12!22;UBERON:0004290!1.94e-12!70;UBERON:0000486!8.43e-12!82;UBERON:0000025!1.07e-11!194;UBERON:0001950!1.53e-11!20;UBERON:0001134!4.83e-10!61;UBERON:0002036!4.83e-10!61;UBERON:0003082!4.83e-10!61;UBERON:0002385!1.19e-09!63;UBERON:0001015!1.19e-09!63;UBERON:0000383!1.19e-09!63;UBERON:0000477!1.72e-09!286;UBERON:0000064!2.02e-09!219;UBERON:0005256!2.45e-08!143;UBERON:0004111!7.20e-08!241;UBERON:0002100!5.51e-07!216;UBERON:0002050!5.76e-07!605;UBERON:0005423!5.76e-07!605;UBERON:0000923!8.95e-07!604;UBERON:0005291!8.95e-07!604;UBERON:0006598!8.95e-07!604;UBERON:0002532!8.95e-07!604 | |ontology_enrichment_uberon=UBERON:0000475!5.33e-24!365;UBERON:0002616!9.69e-20!59;UBERON:0000481!2.51e-19!347;UBERON:0001017!4.10e-19!82;UBERON:0000119!9.69e-19!312;UBERON:0005743!1.02e-18!86;UBERON:0000955!2.92e-18!69;UBERON:0006238!2.92e-18!69;UBERON:0000483!3.61e-18!309;UBERON:0001049!5.84e-18!57;UBERON:0005068!5.84e-18!57;UBERON:0006241!5.84e-18!57;UBERON:0007135!5.84e-18!57;UBERON:0000073!1.97e-17!94;UBERON:0001016!1.97e-17!94;UBERON:0003075!1.18e-15!86;UBERON:0007284!1.18e-15!86;UBERON:0002020!1.19e-15!34;UBERON:0003528!1.19e-15!34;UBERON:0004121!1.46e-15!169;UBERON:0001893!1.60e-15!34;UBERON:0000924!3.78e-15!173;UBERON:0006601!3.78e-15!173;UBERON:0001869!4.14e-15!32;UBERON:0002791!5.37e-15!33;UBERON:0002346!6.99e-15!90;UBERON:0000033!1.86e-14!123;UBERON:0002780!2.05e-14!41;UBERON:0001890!2.05e-14!41;UBERON:0006240!2.05e-14!41;UBERON:0000153!1.64e-13!129;UBERON:0007811!1.64e-13!129;UBERON:0000956!1.68e-13!25;UBERON:0000203!1.68e-13!25;UBERON:0003080!1.82e-13!42;UBERON:0003056!1.83e-13!61;UBERON:0000914!2.06e-13!83;UBERON:0002329!2.06e-13!83;UBERON:0003077!2.06e-13!83;UBERON:0003059!2.06e-13!83;UBERON:0007282!2.06e-13!83;UBERON:0009618!2.06e-13!83;UBERON:0007285!2.06e-13!83;UBERON:0002619!1.52e-12!22;UBERON:0004290!1.94e-12!70;UBERON:0000486!8.43e-12!82;UBERON:0000025!1.07e-11!194;UBERON:0001950!1.53e-11!20;UBERON:0001134!4.83e-10!61;UBERON:0002036!4.83e-10!61;UBERON:0003082!4.83e-10!61;UBERON:0002385!1.19e-09!63;UBERON:0001015!1.19e-09!63;UBERON:0000383!1.19e-09!63;UBERON:0000477!1.72e-09!286;UBERON:0000064!2.02e-09!219;UBERON:0005256!2.45e-08!143;UBERON:0004111!7.20e-08!241;UBERON:0002100!5.51e-07!216;UBERON:0002050!5.76e-07!605;UBERON:0005423!5.76e-07!605;UBERON:0000923!8.95e-07!604;UBERON:0005291!8.95e-07!604;UBERON:0006598!8.95e-07!604;UBERON:0002532!8.95e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.77e-19;32!UBERON:0003528;4.02e-19;34!UBERON:0002020;4.02e-19;34!UBERON:0001893;5.24e-19;34!UBERON:0002791;6.84e-19;32!UBERON:0000956;9.09e-19;25!UBERON:0000203;9.09e-19;25!UBERON:0002619;1.69e-17;22!UBERON:0001950;6.83e-16;20!UBERON:0000073;3.65e-15;53!UBERON:0002616;3.65e-15;53!UBERON:0002780;1.49e-14;41!UBERON:0001890;1.49e-14;41!UBERON:0000955;1.46e-11;68!UBERON:0001017;1.08e-10;75!UBERON:0004732;1.00e-07;13!UBERON:0001016;1.08e-07;83!UBERON:0004733;2.07e-07;12!UBERON:0002028;2.07e-07;12 | |||
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| ||
|short_description=p2@PMM1 | |short_description=p2@PMM1 | ||
}} | }} |
Latest revision as of 21:59, 24 September 2015
Short description: | p2@PMM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PMM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000472620, NM_002676, uc003bal.2_5end |
EntrezGene: | PMM1 |
HGNC: | 9114 |
UniProt: | A8K003Q92871 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.39e-14 | 58 |
myoblast | 1.39e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-14 | 58 |
electrically responsive cell | 8.57e-14 | 61 |
electrically active cell | 8.57e-14 | 61 |
muscle cell | 2.48e-13 | 55 |
smooth muscle cell | 2.55e-10 | 43 |
smooth muscle myoblast | 2.55e-10 | 43 |
vascular associated smooth muscle cell | 5.56e-08 | 32 |