FFCP PHASE1:Hg19::chr5:138211051..138211072,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26045 | |EntrezGene=26045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19409 | |HGNC=19409 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIQ2,O43300 | |UniProt=E5RIQ2,O43300 | ||
|association_with_transcript=0bp_to_ENST00000518785,NM_015564,uc010jez.2,uc011cyz.1,uc011cza.1_5end | |association_with_transcript=0bp_to_ENST00000518785,NM_015564,uc010jez.2,uc011cyz.1,uc011cza.1_5end | ||
|cluster_id=chr5:138211051..138211072,- | |||
|coexpression_cluster_id=C118 | |coexpression_cluster_id=C118 | ||
|description=CAGE_peak_3_at_LRRTM2_5end | |description=CAGE_peak_3_at_LRRTM2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.98e-23;82!UBERON:0006215;7.68e-13;3!UBERON:0010122;1.24e-08;2 | |ontology_enrichment_development_v019=UBERON:0006601;9.98e-23;82!UBERON:0006215;7.68e-13;3!UBERON:0010122;1.24e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.29e-84!57;UBERON:0005068!2.29e-84!57;UBERON:0006241!2.29e-84!57;UBERON:0007135!2.29e-84!57;UBERON:0001017!3.52e-74!82;UBERON:0005743!1.50e-72!86;UBERON:0000073!6.83e-72!94;UBERON:0001016!6.83e-72!94;UBERON:0002616!6.09e-71!59;UBERON:0002780!2.08e-67!41;UBERON:0001890!2.08e-67!41;UBERON:0006240!2.08e-67!41;UBERON:0003080!1.51e-65!42;UBERON:0000955!2.44e-63!69;UBERON:0006238!2.44e-63!69;UBERON:0003075!2.35e-62!86;UBERON:0007284!2.35e-62!86;UBERON:0002346!3.65e-61!90;UBERON:0002020!1.01e-57!34;UBERON:0003528!1.01e-57!34;UBERON:0001893!1.95e-57!34;UBERON:0002791!2.21e-55!33;UBERON:0001869!9.10e-54!32;UBERON:0003056!1.01e-48!61;UBERON:0002619!1.83e-42!22;UBERON:0000956!4.60e-40!25;UBERON:0000203!4.60e-40!25;UBERON:0007023!1.99e-39!115;UBERON:0000924!2.06e-39!173;UBERON:0006601!2.06e-39!173;UBERON:0004121!2.39e-39!169;UBERON:0001950!2.02e-38!20;UBERON:0000033!4.94e-37!123;UBERON:0000153!4.28e-36!129;UBERON:0007811!4.28e-36!129;UBERON:0000025!1.05e-19!194;UBERON:0003076!5.13e-19!15;UBERON:0003057!5.13e-19!15;UBERON:0002308!6.00e-19!9;UBERON:0000125!6.00e-19!9;UBERON:0002420!1.06e-18!9;UBERON:0007245!1.06e-18!9;UBERON:0010009!1.06e-18!9;UBERON:0010011!1.06e-18!9;UBERON:0000454!1.06e-18!9;UBERON:0004111!3.71e-15!241;UBERON:0009663!6.78e-15!7;UBERON:0004733!5.18e-14!12;UBERON:0002028!5.18e-14!12;UBERON:0007277!5.18e-14!12;UBERON:0000200!8.17e-14!6;UBERON:0000477!1.45e-13!286;UBERON:0001871!2.91e-13!7;UBERON:0000064!8.34e-13!219;UBERON:0004732!9.06e-13!13;UBERON:0002298!9.63e-13!8;UBERON:0000483!6.95e-12!309;UBERON:0000119!1.29e-11!312;UBERON:0001872!1.76e-11!5;UBERON:0000349!2.32e-11!5;UBERON:0001894!4.27e-11!7;UBERON:0006222!4.27e-11!7;UBERON:0002021!4.84e-11!5;UBERON:0000475!7.14e-11!365;UBERON:0000369!1.12e-09!4;UBERON:0002435!1.12e-09!4;UBERON:0000204!1.12e-09!4;UBERON:0010082!1.12e-09!4;UBERON:0002680!3.53e-09!9;UBERON:0001895!3.53e-09!9;UBERON:0010092!3.53e-09!9;UBERON:0002771!6.43e-08!3;UBERON:0000988!7.85e-08!3;UBERON:0000062!8.61e-08!511;UBERON:0005383!8.76e-08!3;UBERON:0005382!8.76e-08!3;UBERON:0000481!1.07e-07!347;UBERON:0000922!1.26e-07!612;UBERON:0000467!1.57e-07!625;UBERON:0006331!1.68e-07!3;UBERON:0000480!1.76e-07!626;UBERON:0000468!1.96e-07!659;UBERON:0002240!7.29e-07!3;UBERON:0001896!7.91e-07!3;UBERON:0005290!7.91e-07!3;UBERON:0010096!7.91e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!2.29e-84!57;UBERON:0005068!2.29e-84!57;UBERON:0006241!2.29e-84!57;UBERON:0007135!2.29e-84!57;UBERON:0001017!3.52e-74!82;UBERON:0005743!1.50e-72!86;UBERON:0000073!6.83e-72!94;UBERON:0001016!6.83e-72!94;UBERON:0002616!6.09e-71!59;UBERON:0002780!2.08e-67!41;UBERON:0001890!2.08e-67!41;UBERON:0006240!2.08e-67!41;UBERON:0003080!1.51e-65!42;UBERON:0000955!2.44e-63!69;UBERON:0006238!2.44e-63!69;UBERON:0003075!2.35e-62!86;UBERON:0007284!2.35e-62!86;UBERON:0002346!3.65e-61!90;UBERON:0002020!1.01e-57!34;UBERON:0003528!1.01e-57!34;UBERON:0001893!1.95e-57!34;UBERON:0002791!2.21e-55!33;UBERON:0001869!9.10e-54!32;UBERON:0003056!1.01e-48!61;UBERON:0002619!1.83e-42!22;UBERON:0000956!4.60e-40!25;UBERON:0000203!4.60e-40!25;UBERON:0007023!1.99e-39!115;UBERON:0000924!2.06e-39!173;UBERON:0006601!2.06e-39!173;UBERON:0004121!2.39e-39!169;UBERON:0001950!2.02e-38!20;UBERON:0000033!4.94e-37!123;UBERON:0000153!4.28e-36!129;UBERON:0007811!4.28e-36!129;UBERON:0000025!1.05e-19!194;UBERON:0003076!5.13e-19!15;UBERON:0003057!5.13e-19!15;UBERON:0002308!6.00e-19!9;UBERON:0000125!6.00e-19!9;UBERON:0002420!1.06e-18!9;UBERON:0007245!1.06e-18!9;UBERON:0010009!1.06e-18!9;UBERON:0010011!1.06e-18!9;UBERON:0000454!1.06e-18!9;UBERON:0004111!3.71e-15!241;UBERON:0009663!6.78e-15!7;UBERON:0004733!5.18e-14!12;UBERON:0002028!5.18e-14!12;UBERON:0007277!5.18e-14!12;UBERON:0000200!8.17e-14!6;UBERON:0000477!1.45e-13!286;UBERON:0001871!2.91e-13!7;UBERON:0000064!8.34e-13!219;UBERON:0004732!9.06e-13!13;UBERON:0002298!9.63e-13!8;UBERON:0000483!6.95e-12!309;UBERON:0000119!1.29e-11!312;UBERON:0001872!1.76e-11!5;UBERON:0000349!2.32e-11!5;UBERON:0001894!4.27e-11!7;UBERON:0006222!4.27e-11!7;UBERON:0002021!4.84e-11!5;UBERON:0000475!7.14e-11!365;UBERON:0000369!1.12e-09!4;UBERON:0002435!1.12e-09!4;UBERON:0000204!1.12e-09!4;UBERON:0010082!1.12e-09!4;UBERON:0002680!3.53e-09!9;UBERON:0001895!3.53e-09!9;UBERON:0010092!3.53e-09!9;UBERON:0002771!6.43e-08!3;UBERON:0000988!7.85e-08!3;UBERON:0000062!8.61e-08!511;UBERON:0005383!8.76e-08!3;UBERON:0005382!8.76e-08!3;UBERON:0000481!1.07e-07!347;UBERON:0000922!1.26e-07!612;UBERON:0000467!1.57e-07!625;UBERON:0006331!1.68e-07!3;UBERON:0000480!1.76e-07!626;UBERON:0000468!1.96e-07!659;UBERON:0002240!7.29e-07!3;UBERON:0001896!7.91e-07!3;UBERON:0005290!7.91e-07!3;UBERON:0010096!7.91e-07!3 | ||
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|short_description=p3@LRRTM2 | |short_description=p3@LRRTM2 | ||
}} | }} |
Latest revision as of 23:39, 24 September 2015
Short description: | p3@LRRTM2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRTM2_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 0bp_to_ENST00000518785, NM_015564, uc010jez.2, uc011cyz.1, uc011cza.1_5end |
EntrezGene: | LRRTM2 |
HGNC: | 19409 |
UniProt: | E5RIQ2O43300 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data