FFCP PHASE1:Hg19::chr22:43547533..43547590,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=706 | |EntrezGene=706 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1158 | |HGNC=1158 | ||
|TSSclassifier=strong | |||
|UniProt=B1AH88,P30536 | |UniProt=B1AH88,P30536 | ||
|association_with_transcript=0bp_to_ENST00000396265,ENST00000472378,NM_000714,NM_007311,uc003bdn.2,uc003bdo.2_5end | |association_with_transcript=0bp_to_ENST00000396265,ENST00000472378,NM_000714,NM_007311,uc003bdn.2,uc003bdo.2_5end | ||
|cluster_id=chr22:43547533..43547590,+ | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_1_at_TSPO_5end | |description=CAGE_peak_1_at_TSPO_5end | ||
|id=chr22:43547533..43547590,+ | |id=chr22:43547533..43547590,+ | ||
|ontology_enrichment_celltype=CL:0002371!4.60e-48!591;CL:0000144!2.90e-42!625;CL:0000012!2.46e-36!682;CL:0000548!4.66e-36!679;CL:0000004!4.66e-36!679;CL:0000255!4.66e-36!679;CL:0000003!8.89e-29!722;CL:0000222!9.82e-22!119;CL:0000723!4.54e-19!436;CL:0000063!4.56e-19!578;CL:0000048!1.06e-18!430;CL:0000034!5.37e-17!444;CL:0000055!7.79e-17!180;CL:0000183!9.46e-16!59;CL:0000680!4.77e-15!57;CL:0000056!4.77e-15!57;CL:0000355!4.77e-15!57;CL:0000220!1.57e-14!246;CL:0000192!2.99e-14!42;CL:0000514!2.99e-14!42;CL:0000187!8.75e-14!54;CL:0002321!1.14e-13!248;CL:0000359!2.17e-12!32;CL:0002078!1.65e-11!44;CL:0000115!6.16e-11!35;CL:0000057!4.92e-10!75;CL:0000393!5.47e-10!60;CL:0000211!5.47e-10!60;CL:0002320!1.07e-09!365;CL:0002194!1.55e-08!63;CL:0000576!1.55e-08!63;CL:0000040!1.55e-08!63;CL:0000559!1.55e-08!63;CL:0002009!2.01e-08!65;CL:0000134!2.84e-08!358;CL:0000766!6.10e-08!76;CL:0000557!1.91e-07!71;CL:0000213!2.00e-07!57;CL:0000215!2.00e-07!57;CL:0000839!4.38e-07!70;CL:0002139!4.67e-07!24;CL:1000449!7.52e-07!16 | |ontology_enrichment_celltype=CL:0002371!4.60e-48!591;CL:0000144!2.90e-42!625;CL:0000012!2.46e-36!682;CL:0000548!4.66e-36!679;CL:0000004!4.66e-36!679;CL:0000255!4.66e-36!679;CL:0000003!8.89e-29!722;CL:0000222!9.82e-22!119;CL:0000723!4.54e-19!436;CL:0000063!4.56e-19!578;CL:0000048!1.06e-18!430;CL:0000034!5.37e-17!444;CL:0000055!7.79e-17!180;CL:0000183!9.46e-16!59;CL:0000680!4.77e-15!57;CL:0000056!4.77e-15!57;CL:0000355!4.77e-15!57;CL:0000220!1.57e-14!246;CL:0000192!2.99e-14!42;CL:0000514!2.99e-14!42;CL:0000187!8.75e-14!54;CL:0002321!1.14e-13!248;CL:0000359!2.17e-12!32;CL:0002078!1.65e-11!44;CL:0000115!6.16e-11!35;CL:0000057!4.92e-10!75;CL:0000393!5.47e-10!60;CL:0000211!5.47e-10!60;CL:0002320!1.07e-09!365;CL:0002194!1.55e-08!63;CL:0000576!1.55e-08!63;CL:0000040!1.55e-08!63;CL:0000559!1.55e-08!63;CL:0002009!2.01e-08!65;CL:0000134!2.84e-08!358;CL:0000766!6.10e-08!76;CL:0000557!1.91e-07!71;CL:0000213!2.00e-07!57;CL:0000215!2.00e-07!57;CL:0000839!4.38e-07!70;CL:0002139!4.67e-07!24;CL:1000449!7.52e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.01e-11;32!CL:0000192;2.28e-10;43!CL:0000115;1.07e-09;36!CL:0002078;1.69e-08;45!CL:0000187;4.41e-08;55!CL:0002139;4.66e-07;24!CL:1000449;6.86e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.80e-22,121;CL:0000723,1.94e-19,433;CL:0000048,4.55e-19,427;CL:0000034,2.44e-17,441;CL:0000680,4.41e-15,58;CL:0000056,4.41e-15,58;CL:0000355,4.41e-15,58;CL:0000192,2.99e-14,43;CL:0000514,2.99e-14,43;CL:0002321,4.17e-14,250;CL:0000187,8.03e-14,55;CL:0000359,2.17e-12,32;CL:0002078,5.69e-12,45;CL:0000115,2.06e-11,36;CL:0000057,3.20e-10,76;CL:0000393,4.70e-10,61;CL:0000211,4.70e-10,61;CL:0002320,6.99e-10,361;CL:0002194,1.92e-09,59;CL:0000576,1.92e-09,59;CL:0000040,1.92e-09,59;CL:0000559,1.92e-09,59;CL:0002009,2.70e-09,61;CL:0000766,1.13e-08,72;CL:0000473,1.71e-08,48;CL:0000234,1.71e-08,48;CL:0000134,1.93e-08,354;CL:0000557,3.55e-08,67;CL:0000213,8.57e-08,58;CL:0000215,8.57e-08,58;CL:0000839,8.58e-08,66;CL:0002139,4.67e-07,24;CL:1000449,6.94e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;2.28e-10;43!CL:0000355;2.49e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!8.53e-23!216;UBERON:0002204!9.53e-23!167;UBERON:0002049!4.65e-18!79;UBERON:0007798!4.65e-18!79;UBERON:0000486!9.47e-17!82;UBERON:0000914!1.22e-16!83;UBERON:0002329!1.22e-16!83;UBERON:0003077!1.22e-16!83;UBERON:0003059!1.22e-16!83;UBERON:0007282!1.22e-16!83;UBERON:0009618!1.22e-16!83;UBERON:0007285!1.22e-16!83;UBERON:0000055!7.30e-16!69;UBERON:0000926!9.96e-16!448;UBERON:0004120!9.96e-16!448;UBERON:0006603!9.96e-16!448;UBERON:0001981!5.97e-15!60;UBERON:0007500!5.97e-15!60;UBERON:0004537!5.97e-15!60;UBERON:0006965!5.97e-15!60;UBERON:0004535!7.46e-15!110;UBERON:0004290!1.52e-14!70;UBERON:0001009!4.68e-14!113;UBERON:0001637!7.25e-14!42;UBERON:0003509!7.25e-14!42;UBERON:0004572!7.25e-14!42;UBERON:0004872!2.38e-13!84;UBERON:0001134!1.57e-12!61;UBERON:0002036!1.57e-12!61;UBERON:0003082!1.57e-12!61;UBERON:0005256!1.05e-11!143;UBERON:0003914!1.12e-11!118;UBERON:0002385!1.71e-11!63;UBERON:0001015!1.71e-11!63;UBERON:0000383!1.71e-11!63;UBERON:0004573!6.78e-11!33;UBERON:0004571!6.78e-11!33;UBERON:0004765!2.62e-10!101;UBERON:0001434!2.62e-10!101;UBERON:0002384!1.96e-09!375;UBERON:0002371!2.78e-09!80;UBERON:0001474!2.42e-08!86;UBERON:0000490!6.54e-08!138;UBERON:0002100!6.35e-07!216;UBERON:0004211!7.52e-07!16;UBERON:0001285!7.52e-07!16;UBERON:0007684!7.52e-07!16;UBERON:0003220!7.52e-07!16;UBERON:0004208!7.52e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.89e-10;42!UBERON:0003509;4.89e-10;42!UBERON:0004572;4.89e-10;42!UBERON:0003914;8.16e-10;74!UBERON:0004573;8.48e-10;33!UBERON:0004571;8.48e-10;33!UBERON:0007500;1.37e-09;56!UBERON:0001981;1.37e-09;56!UBERON:0004537;1.37e-09;56!UBERON:0002049;2.40e-08;75!UBERON:0007798;2.40e-08;75!UBERON:0000055;3.36e-08;65!UBERON:0006555;6.86e-07;15!UBERON:0004819;6.86e-07;15!UBERON:0001285;6.86e-07;15!UBERON:0007684;6.86e-07;15 | |||
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| ||
|short_description=p1@TSPO | |short_description=p1@TSPO | ||
}} | }} |
Latest revision as of 01:23, 25 September 2015
Short description: | p1@TSPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSPO_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000396265, ENST00000472378, NM_000714, NM_007311, uc003bdn.2, uc003bdo.2_5end |
EntrezGene: | TSPO |
HGNC: | 1158 |
UniProt: | B1AH88P30536 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data