FFCP PHASE1:Hg19::chr5:140787568..140787594,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56100 | |EntrezGene=56100 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8713 | |HGNC=8713 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5F9 | |UniProt=Q9Y5F9 | ||
|association_with_transcript=-175bp_to_ENST00000520790,NM_018926,NM_032100,uc003lki.1,uc003lkj.1_5end | |association_with_transcript=-175bp_to_ENST00000520790,NM_018926,NM_032100,uc003lki.1,uc003lkj.1_5end | ||
|cluster_id=chr5:140787568..140787594,+ | |||
|description=CAGE_peak_1_at_PCDHGB6_5end | |description=CAGE_peak_1_at_PCDHGB6_5end | ||
|id=chr5:140787568..140787594,+ | |id=chr5:140787568..140787594,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.66e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.10e-36!115;UBERON:0005743!2.23e-33!86;UBERON:0001017!2.92e-32!82;UBERON:0001049!1.06e-30!57;UBERON:0005068!1.06e-30!57;UBERON:0006241!1.06e-30!57;UBERON:0007135!1.06e-30!57;UBERON:0000073!1.38e-30!94;UBERON:0001016!1.38e-30!94;UBERON:0002616!2.47e-29!59;UBERON:0003075!3.23e-27!86;UBERON:0007284!3.23e-27!86;UBERON:0002346!1.10e-26!90;UBERON:0000955!7.18e-26!69;UBERON:0006238!7.18e-26!69;UBERON:0000153!1.60e-25!129;UBERON:0007811!1.60e-25!129;UBERON:0004121!5.10e-25!169;UBERON:0000033!5.71e-25!123;UBERON:0000924!5.89e-25!173;UBERON:0006601!5.89e-25!173;UBERON:0003080!2.70e-24!42;UBERON:0002780!7.67e-24!41;UBERON:0001890!7.67e-24!41;UBERON:0006240!7.67e-24!41;UBERON:0003056!2.19e-22!61;UBERON:0001893!6.04e-20!34;UBERON:0002020!9.96e-20!34;UBERON:0003528!9.96e-20!34;UBERON:0002791!2.24e-19!33;UBERON:0001869!1.03e-18!32;UBERON:0000475!1.16e-18!365;UBERON:0000477!5.82e-18!286;UBERON:0004111!1.29e-15!241;UBERON:0000119!1.30e-14!312;UBERON:0000956!1.78e-14!25;UBERON:0000203!1.78e-14!25;UBERON:0000483!3.40e-14!309;UBERON:0000481!6.05e-14!347;UBERON:0000025!6.11e-14!194;UBERON:0002619!1.82e-13!22;UBERON:0000468!3.60e-13!659;UBERON:0001950!7.32e-13!20;UBERON:0000467!3.50e-10!625;UBERON:0000480!5.27e-10!626;UBERON:0000922!3.18e-08!612;UBERON:0003076!1.35e-07!15;UBERON:0003057!1.35e-07!15;UBERON:0000064!2.21e-07!219;UBERON:0002050!5.14e-07!605;UBERON:0005423!5.14e-07!605;UBERON:0000062!6.85e-07!511;UBERON:0002308!9.79e-07!9;UBERON:0000125!9.79e-07!9;UBERON:0000923!9.90e-07!604;UBERON:0005291!9.90e-07!604;UBERON:0006598!9.90e-07!604;UBERON:0002532!9.90e-07!604 | |ontology_enrichment_uberon=UBERON:0007023!3.10e-36!115;UBERON:0005743!2.23e-33!86;UBERON:0001017!2.92e-32!82;UBERON:0001049!1.06e-30!57;UBERON:0005068!1.06e-30!57;UBERON:0006241!1.06e-30!57;UBERON:0007135!1.06e-30!57;UBERON:0000073!1.38e-30!94;UBERON:0001016!1.38e-30!94;UBERON:0002616!2.47e-29!59;UBERON:0003075!3.23e-27!86;UBERON:0007284!3.23e-27!86;UBERON:0002346!1.10e-26!90;UBERON:0000955!7.18e-26!69;UBERON:0006238!7.18e-26!69;UBERON:0000153!1.60e-25!129;UBERON:0007811!1.60e-25!129;UBERON:0004121!5.10e-25!169;UBERON:0000033!5.71e-25!123;UBERON:0000924!5.89e-25!173;UBERON:0006601!5.89e-25!173;UBERON:0003080!2.70e-24!42;UBERON:0002780!7.67e-24!41;UBERON:0001890!7.67e-24!41;UBERON:0006240!7.67e-24!41;UBERON:0003056!2.19e-22!61;UBERON:0001893!6.04e-20!34;UBERON:0002020!9.96e-20!34;UBERON:0003528!9.96e-20!34;UBERON:0002791!2.24e-19!33;UBERON:0001869!1.03e-18!32;UBERON:0000475!1.16e-18!365;UBERON:0000477!5.82e-18!286;UBERON:0004111!1.29e-15!241;UBERON:0000119!1.30e-14!312;UBERON:0000956!1.78e-14!25;UBERON:0000203!1.78e-14!25;UBERON:0000483!3.40e-14!309;UBERON:0000481!6.05e-14!347;UBERON:0000025!6.11e-14!194;UBERON:0002619!1.82e-13!22;UBERON:0000468!3.60e-13!659;UBERON:0001950!7.32e-13!20;UBERON:0000467!3.50e-10!625;UBERON:0000480!5.27e-10!626;UBERON:0000922!3.18e-08!612;UBERON:0003076!1.35e-07!15;UBERON:0003057!1.35e-07!15;UBERON:0000064!2.21e-07!219;UBERON:0002050!5.14e-07!605;UBERON:0005423!5.14e-07!605;UBERON:0000062!6.85e-07!511;UBERON:0002308!9.79e-07!9;UBERON:0000125!9.79e-07!9;UBERON:0000923!9.90e-07!604;UBERON:0005291!9.90e-07!604;UBERON:0006598!9.90e-07!604;UBERON:0002532!9.90e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.52e-23;41!UBERON:0001890;5.52e-23;41!UBERON:0001893;3.36e-22;34!UBERON:0002791;3.41e-22;32!UBERON:0001869;4.05e-22;32!UBERON:0003528;4.20e-22;34!UBERON:0002020;4.20e-22;34!UBERON:0000073;1.55e-21;53!UBERON:0002616;1.55e-21;53!UBERON:0000956;1.72e-18;25!UBERON:0000203;1.72e-18;25!UBERON:0001950;3.93e-17;20!UBERON:0002619;6.36e-17;22!UBERON:0001017;7.97e-16;75!UBERON:0000955;5.41e-15;68!UBERON:0001016;6.09e-13;83!UBERON:0007023;1.22e-11;114!UBERON:0000125;8.57e-09;9!UBERON:0002308;8.57e-09;9!UBERON:0002420;2.44e-08;9!UBERON:0007245;2.44e-08;9!UBERON:0010009;2.44e-08;9!UBERON:0010011;2.44e-08;9!UBERON:0000454;2.44e-08;9!UBERON:0009663;3.12e-07;7!UBERON:0004733;3.54e-07;12!UBERON:0002028;3.54e-07;12!UBERON:0001894;7.10e-07;7 | |||
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| ||
|short_description=p1@PCDHGB6 | |short_description=p1@PCDHGB6 | ||
}} | }} |
Latest revision as of 04:16, 25 September 2015
Short description: | p1@PCDHGB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDHGB6_5end |
Coexpression cluster: | NA |
Association with transcript: | -175bp_to_ENST00000520790, NM_018926, NM_032100, uc003lki.1, uc003lkj.1_5end |
EntrezGene: | PCDHGB6 |
HGNC: | 8713 |
UniProt: | Q9Y5F9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data