FFCP PHASE1:Hg19::chr6:139456200..139456225,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51696 | |EntrezGene=51696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21041 | |HGNC=21041 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBI9 | |UniProt=Q9UBI9 | ||
|association_with_transcript=-23bp_to_ENST00000367658,NM_016217,uc003qin.2_5end | |association_with_transcript=-23bp_to_ENST00000367658,NM_016217,uc003qin.2_5end | ||
|cluster_id=chr6:139456200..139456225,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_2_at_HECA_5end | |description=CAGE_peak_2_at_HECA_5end | ||
|id=chr6:139456200..139456225,+ | |id=chr6:139456200..139456225,+ | ||
|ontology_enrichment_celltype=CL:0000738!9.82e-34!140;CL:0002031!1.30e-28!124;CL:0000037!4.02e-26!172;CL:0000566!4.02e-26!172;CL:0002087!4.04e-26!119;CL:0002032!7.19e-25!165;CL:0000837!7.19e-25!165;CL:0000766!4.16e-24!76;CL:0000988!2.49e-23!182;CL:0000557!9.86e-21!71;CL:0002057!1.07e-19!42;CL:0000839!1.27e-19!70;CL:0002009!4.29e-19!65;CL:0002194!4.14e-18!63;CL:0000576!4.14e-18!63;CL:0000040!4.14e-18!63;CL:0000559!4.14e-18!63;CL:0000763!1.24e-16!112;CL:0000049!1.24e-16!112;CL:0000860!2.09e-16!45;CL:0000838!1.50e-08!52;CL:0000542!5.54e-08!53;CL:0000051!5.54e-08!53;CL:0000791!2.07e-07!18;CL:0000789!2.07e-07!18;CL:0002420!2.07e-07!18;CL:0002419!2.07e-07!18;CL:0000790!2.07e-07!18;CL:0000084!2.96e-07!25;CL:0000827!2.96e-07!25 | |ontology_enrichment_celltype=CL:0000738!9.82e-34!140;CL:0002031!1.30e-28!124;CL:0000037!4.02e-26!172;CL:0000566!4.02e-26!172;CL:0002087!4.04e-26!119;CL:0002032!7.19e-25!165;CL:0000837!7.19e-25!165;CL:0000766!4.16e-24!76;CL:0000988!2.49e-23!182;CL:0000557!9.86e-21!71;CL:0002057!1.07e-19!42;CL:0000839!1.27e-19!70;CL:0002009!4.29e-19!65;CL:0002194!4.14e-18!63;CL:0000576!4.14e-18!63;CL:0000040!4.14e-18!63;CL:0000559!4.14e-18!63;CL:0000763!1.24e-16!112;CL:0000049!1.24e-16!112;CL:0000860!2.09e-16!45;CL:0000838!1.50e-08!52;CL:0000542!5.54e-08!53;CL:0000051!5.54e-08!53;CL:0000791!2.07e-07!18;CL:0000789!2.07e-07!18;CL:0002420!2.07e-07!18;CL:0002419!2.07e-07!18;CL:0000790!2.07e-07!18;CL:0000084!2.96e-07!25;CL:0000827!2.96e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.48e-15;33!CL:0002057;1.48e-15;33!CL:0000473;9.85e-14;39!CL:0000234;9.85e-14;39!CL:0000576;6.44e-13;48!CL:0000766;3.99e-12;69!CL:0000738;1.48e-08;136!CL:0002087;1.50e-08;104!CL:0000791;1.73e-07;18!CL:0000789;1.73e-07;18!CL:0002419;1.73e-07;18!CL:0000084;3.31e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.03e-36,136;CL:0002031,1.68e-31,120;CL:0002087,6.48e-29,115;CL:0000037,2.31e-28,168;CL:0000766,1.08e-27,72;CL:0002032,4.27e-27,161;CL:0000837,4.27e-27,161;CL:0000988,6.63e-26,177;CL:0000557,4.03e-24,67;CL:0000839,6.47e-23,66;CL:0002009,1.69e-22,61;CL:0002194,1.83e-21,59;CL:0000576,1.83e-21,59;CL:0000040,1.83e-21,59;CL:0000559,1.83e-21,59;CL:0000473,1.85e-20,48;CL:0000234,1.85e-20,48;CL:0000860,1.02e-19,42;CL:0002057,1.02e-19,42;CL:0000763,8.32e-19,108;CL:0000049,8.32e-19,108;CL:0000838,1.47e-08,52;CL:0000542,5.44e-08,53;CL:0000051,5.44e-08,53;CL:0000791,2.04e-07,18;CL:0000789,2.04e-07,18;CL:0002420,2.04e-07,18;CL:0002419,2.04e-07,18;CL:0000790,2.04e-07,18;CL:0000084,2.91e-07,25;CL:0000827,2.91e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;1.61e-14;42!CL:0000790;1.73e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.76e-33!115;UBERON:0002390!5.21e-24!102;UBERON:0003061!5.21e-24!102;UBERON:0002193!1.93e-19!112;UBERON:0002371!2.30e-17!80;UBERON:0001474!2.19e-16!86;UBERON:0001049!2.55e-16!57;UBERON:0005068!2.55e-16!57;UBERON:0006241!2.55e-16!57;UBERON:0007135!2.55e-16!57;UBERON:0004765!3.79e-14!101;UBERON:0001434!3.79e-14!101;UBERON:0003080!4.81e-14!42;UBERON:0002780!1.08e-13!41;UBERON:0001890!1.08e-13!41;UBERON:0006240!1.08e-13!41;UBERON:0002616!1.82e-13!59;UBERON:0002020!9.04e-12!34;UBERON:0003528!9.04e-12!34;UBERON:0001017!1.32e-11!82;UBERON:0000955!2.20e-11!69;UBERON:0006238!2.20e-11!69;UBERON:0001893!2.48e-11!34;UBERON:0002791!5.12e-11!33;UBERON:0005743!7.14e-11!86;UBERON:0001869!8.17e-11!32;UBERON:0000073!4.45e-10!94;UBERON:0001016!4.45e-10!94;UBERON:0002619!6.50e-10!22;UBERON:0001950!1.90e-09!20;UBERON:0000956!4.26e-09!25;UBERON:0000203!4.26e-09!25;UBERON:0002346!7.83e-09!90;UBERON:0002405!1.01e-08!115;UBERON:0003075!1.62e-08!86;UBERON:0007284!1.62e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.26e-10;41!UBERON:0001890;3.26e-10;41!UBERON:0003528;3.27e-10;34!UBERON:0002020;3.27e-10;34!UBERON:0001869;5.19e-10;32!UBERON:0002619;5.40e-10;22!UBERON:0002791;6.39e-10;32!UBERON:0001893;6.71e-10;34!UBERON:0001950;1.63e-09;20!UBERON:0000956;3.14e-09;25!UBERON:0000203;3.14e-09;25!UBERON:0007023;3.38e-09;114!UBERON:0000073;9.32e-09;53!UBERON:0002616;9.32e-09;53 | |||
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| ||
|short_description=p2@HECA | |short_description=p2@HECA | ||
}} | }} |
Latest revision as of 05:44, 25 September 2015
Short description: | p2@HECA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HECA_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | -23bp_to_ENST00000367658, NM_016217, uc003qin.2_5end |
EntrezGene: | HECA |
HGNC: | 21041 |
UniProt: | Q9UBI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.97e-33 | 114 |
hematopoietic system | 5.23e-27 | 98 |
blood island | 5.23e-27 | 98 |
hemolymphoid system | 7.98e-22 | 108 |
bone marrow | 3.39e-20 | 76 |
bone element | 5.27e-19 | 82 |
skeletal element | 1.83e-17 | 90 |
immune system | 1.19e-16 | 93 |
neural tube | 5.52e-16 | 56 |
neural rod | 5.52e-16 | 56 |
future spinal cord | 5.52e-16 | 56 |
neural keel | 5.52e-16 | 56 |
skeletal system | 6.69e-16 | 100 |
regional part of nervous system | 5.80e-15 | 53 |
regional part of brain | 5.80e-15 | 53 |
regional part of forebrain | 1.04e-13 | 41 |
forebrain | 1.04e-13 | 41 |
anterior neural tube | 1.04e-13 | 41 |
future forebrain | 1.04e-13 | 41 |
brain grey matter | 8.78e-12 | 34 |
gray matter | 8.78e-12 | 34 |
telencephalon | 2.41e-11 | 34 |
central nervous system | 2.91e-11 | 81 |
brain | 4.98e-11 | 68 |
future brain | 4.98e-11 | 68 |
cerebral hemisphere | 7.96e-11 | 32 |
regional part of telencephalon | 7.99e-11 | 32 |
nervous system | 2.19e-10 | 89 |
regional part of cerebral cortex | 6.35e-10 | 22 |
neocortex | 1.86e-09 | 20 |
cerebral cortex | 4.17e-09 | 25 |
pallium | 4.17e-09 | 25 |
neurectoderm | 2.30e-08 | 86 |
neural plate | 4.74e-08 | 82 |
presumptive neural plate | 4.74e-08 | 82 |