FFCP PHASE1:Hg19::chr1:221052776..221052799,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3142 | |EntrezGene=3142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4978 | |HGNC=4978 | ||
|TSSclassifier=strong | |||
|UniProt=Q14774 | |UniProt=Q14774 | ||
|association_with_transcript=33bp_to_NM_021958,uc001hmv.3_5end | |association_with_transcript=33bp_to_NM_021958,uc001hmv.3_5end | ||
|cluster_id=chr1:221052776..221052799,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_HLX_5end | |description=CAGE_peak_1_at_HLX_5end | ||
|id=chr1:221052776..221052799,+ | |id=chr1:221052776..221052799,+ | ||
|ontology_enrichment_celltype=CL:0000557!1.02e-21!71;CL:0002009!2.02e-21!65;CL:0000766!2.64e-21!76;CL:0002194!1.03e-20!63;CL:0000576!1.03e-20!63;CL:0000040!1.03e-20!63;CL:0000559!1.03e-20!63;CL:0000839!7.16e-20!70;CL:0000763!1.31e-18!112;CL:0000049!1.31e-18!112;CL:0002057!1.44e-18!42;CL:0000860!9.05e-18!45;CL:0000048!3.83e-16!430;CL:0000723!1.16e-14!436;CL:0000034!1.33e-13!444;CL:0002320!4.09e-11!365;CL:0000115!4.70e-11!35;CL:0000222!5.67e-11!119;CL:0000134!1.12e-10!358;CL:0000219!2.54e-08!390;CL:0002078!5.55e-08!44;CL:0000213!1.06e-07!57;CL:0000215!1.06e-07!57;CL:0002139!2.31e-07!24;CL:0000071!9.87e-07!18;CL:0002546!9.87e-07!18 | |ontology_enrichment_celltype=CL:0000557!1.02e-21!71;CL:0002009!2.02e-21!65;CL:0000766!2.64e-21!76;CL:0002194!1.03e-20!63;CL:0000576!1.03e-20!63;CL:0000040!1.03e-20!63;CL:0000559!1.03e-20!63;CL:0000839!7.16e-20!70;CL:0000763!1.31e-18!112;CL:0000049!1.31e-18!112;CL:0002057!1.44e-18!42;CL:0000860!9.05e-18!45;CL:0000048!3.83e-16!430;CL:0000723!1.16e-14!436;CL:0000034!1.33e-13!444;CL:0002320!4.09e-11!365;CL:0000115!4.70e-11!35;CL:0000222!5.67e-11!119;CL:0000134!1.12e-10!358;CL:0000219!2.54e-08!390;CL:0002078!5.55e-08!44;CL:0000213!1.06e-07!57;CL:0000215!1.06e-07!57;CL:0002139!2.31e-07!24;CL:0000071!9.87e-07!18;CL:0002546!9.87e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.76e-21;33!CL:0002057;4.76e-21;33!CL:0000473;3.13e-17;39!CL:0000234;3.13e-17;39!CL:0000576;2.83e-14;48!CL:0000115;3.01e-11;36!CL:0000766;4.08e-11;69!CL:0002139;2.26e-08;24!CL:0000071;9.05e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,7.89e-23,67;CL:0002009,1.10e-22,61;CL:0000766,1.35e-22,72;CL:0002194,7.19e-22,59;CL:0000576,7.19e-22,59;CL:0000040,7.19e-22,59;CL:0000559,7.19e-22,59;CL:0000839,2.34e-20,66;CL:0000473,4.76e-20,48;CL:0000234,4.76e-20,48;CL:0000860,6.06e-20,42;CL:0002057,6.06e-20,42;CL:0000763,6.97e-20,108;CL:0000049,6.97e-20,108;CL:0000048,3.66e-14,427;CL:0000723,4.76e-13,433;CL:0000115,5.89e-13,36;CL:0000034,4.07e-12,441;CL:0000222,2.22e-10,121;CL:0002320,1.45e-09,361;CL:0000134,2.47e-09,354;CL:0002078,3.34e-09,45;CL:0002139,2.49e-08,24;CL:0000213,5.54e-08,58;CL:0000215,5.54e-08,58;CL:0000071,1.35e-07,18;CL:0002546,1.35e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;7.91e-15;42!CL:0002546;9.05e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.05e-31!216;UBERON:0002193!4.47e-28!112;UBERON:0002390!3.46e-26!102;UBERON:0003061!3.46e-26!102;UBERON:0002204!5.12e-24!167;UBERON:0002371!6.85e-22!80;UBERON:0002405!1.39e-21!115;UBERON:0001474!4.42e-20!86;UBERON:0004765!3.25e-17!101;UBERON:0001434!3.25e-17!101;UBERON:0000926!9.51e-17!448;UBERON:0004120!9.51e-17!448;UBERON:0006603!9.51e-17!448;UBERON:0001009!1.94e-15!113;UBERON:0004535!4.97e-15!110;UBERON:0002384!3.33e-11!375;UBERON:0004872!8.21e-11!84;UBERON:0000055!1.29e-10!69;UBERON:0001981!1.73e-09!60;UBERON:0007500!1.73e-09!60;UBERON:0004537!1.73e-09!60;UBERON:0006965!1.73e-09!60;UBERON:0002049!5.87e-09!79;UBERON:0007798!5.87e-09!79;UBERON:0000479!2.74e-08!787;UBERON:0000467!7.46e-08!625;UBERON:0000480!1.17e-07!626;UBERON:0000468!1.83e-07!659;UBERON:0003914!2.90e-07!118;UBERON:0001986!9.87e-07!18;UBERON:0004638!9.87e-07!18;UBERON:0004852!9.87e-07!18 | |ontology_enrichment_uberon=UBERON:0003081!4.05e-31!216;UBERON:0002193!4.47e-28!112;UBERON:0002390!3.46e-26!102;UBERON:0003061!3.46e-26!102;UBERON:0002204!5.12e-24!167;UBERON:0002371!6.85e-22!80;UBERON:0002405!1.39e-21!115;UBERON:0001474!4.42e-20!86;UBERON:0004765!3.25e-17!101;UBERON:0001434!3.25e-17!101;UBERON:0000926!9.51e-17!448;UBERON:0004120!9.51e-17!448;UBERON:0006603!9.51e-17!448;UBERON:0001009!1.94e-15!113;UBERON:0004535!4.97e-15!110;UBERON:0002384!3.33e-11!375;UBERON:0004872!8.21e-11!84;UBERON:0000055!1.29e-10!69;UBERON:0001981!1.73e-09!60;UBERON:0007500!1.73e-09!60;UBERON:0004537!1.73e-09!60;UBERON:0006965!1.73e-09!60;UBERON:0002049!5.87e-09!79;UBERON:0007798!5.87e-09!79;UBERON:0000479!2.74e-08!787;UBERON:0000467!7.46e-08!625;UBERON:0000480!1.17e-07!626;UBERON:0000468!1.83e-07!659;UBERON:0003914!2.90e-07!118;UBERON:0001986!9.87e-07!18;UBERON:0004638!9.87e-07!18;UBERON:0004852!9.87e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.05e-08;18!UBERON:0001986;9.05e-08;18!UBERON:0004852;9.05e-08;18!UBERON:0000178;3.35e-07;15!UBERON:0000179;3.35e-07;15!UBERON:0000463;3.35e-07;15 | |||
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|phase1_expression=2.36181893051724,1.49870366723688,3.94672331468719,5.00366491765652,3.12872766099101,7.85104671690332,5.06599756336621,3.15859936713415,1.30592814099919,0.737201809504527,1.39560233594486,0,0,2.10402800032079,2.98257638155124,17.4804538077462,8.43772339233568,7.30310090387373,11.7103871709722,1.10808952269109,1.02000345622126,0.940364164434263,0,0,0,0.152826811495903,0.164201178899891,0,12.9810211360138,0.383829398097213,2.47705797305722,0,0,0,0,0,0.880801318004542,3.87796785972314,5.01361118675354,3.90619567288533,4.70222495903841,5.50619232232265,4.37878464978117,6.39752250630085,9.44689859222024,0.970336244751265,27.4266263548708,30.4264237136151,18.2726758828111,150.175428792163,100.671157665937,29.087314276296,33.440331031452,20.0100251910986,9.47985406160392,12.0475097307267,12.8265890527188,3.37085226667627,47.4430033174899,30.4882575722289,17.2621023965741,63.6613009360362,98.9339741803294,31.1144067888867,49.6257798054879,40.2843509530709,13.7020894779026,147.985463836222,103.77510076562,32.7955155504726,59.3291512580701,29.8304885149927,14.8737322097216,1.69004229049553,2.55125159958052,0.628975936525128,7.07670376222919,10.0618518203809,4.33959084082116,0,0.19891667719909,0.547992461293902,1.75996244461323,0.546138611262131,0.889509253863555,0.853460445133014,0.800791974072025,1.14950487990897,0.661044872784862,0,0,0,0.382273228125229,1.32171328579026,0,1.05353633910031,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,4.87613732627923,1.34140171940727,1.66221330396589,2.1686349143074,1.00267582127178,2.75208386025565,0,0.486634870302636,0,0,0.087834785693126,1.44076983047484,0,0,8.43823223502177,10.0995247633575,8.3763515126885,0.476981248610684,0.571994910780128,0,1.59009925893364,4.30117297553062,3.12426451446835,1.13061588384802,4.61449379830897,12.105193845363,4.38889429727302,1.8089173141853,1.77883131343355,2.00832367658802,4.02829317109147,6.84244895146661,2.4406205754817,4.41195696415042,5.67099363517232,3.03619076165871,2.69435247151404,6.0810199460994,9.19899824795299,3.79706263827252,3.29763139074733,0,0,0,2.48485975847659,0.886413581652058,0.794455084879313,2.86836620748814,0.354668382198357,0.560677600142307,0,1.48000529050296,0,1.0776853765575,2.12500474047496,0.605429710579726,0,2.81185718200556,0.936480230490962,1.1409436430889,1.79338416662161,3.99277295388801,2.26622122115384,1.12360645361799,0.61246251376468,0.368502951935304,2.16984140469107,2.37600571456411,2.71993622206413,8.19145225744224,12.9351265526923,0.841680569770331,0.750711119231785,0.554128230968366,0,2.14541457059314,0.300476117813194,0.567160915800105,3.94657198515496,2.13557388818567,1.48352330811693,6.30191301777245,7.11062451745228,1.54584324027377,0.37223371266318,1.5189869901714,0.68205903612839,3.28163906517349,1.65689817556139,1.77810662500693,2.4850671476163,1.61203357164224,1.3564847384839,0,0,0,0,0,0.69716365721711,0,0.252320850875628,0,0,0,1.38134921352481,1.85747171212792,1.44375896333917,0.828147600278907,0,0.482022059766964,0.441175890929576,0.653638332277218,0.237270619111097,0,0.588664395376038,0,3.69077727312324,7.01208869017229,10.7009242946164,7.3504355692771,1.26755034821831,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,1.62904152655162,2.07986957055916,0,0,0.117408694235822,1.58803092537181,13.4265798647217,1.33177906564219,0,0,1.47730203652438,2.34004265139238,1.93220510975347,0,0.16798212819886,0,0.0895585227028483,0,0,2.46331618947972,0.264145302039678,2.48793738648926,1.58531948758658,2.90357596880674,0.444485260045183,1.90994212779139,1.17217447210047,1.71072446022705,0,4.80548892550268,0.285826432630578,0,0,0,2.58543431515556,3.57656445851882,2.535908257668,1.06375246633948,2.08014873822732,1.80045161983499,4.25547396069835,2.39779961114489,3.57444984145369,5.96883765930587,3.29296134712308,2.60588947434988,2.48774364119782,1.58390374586686,0.904318131178758,0.871533458600294,1.19967589418468,0,6.02708509718552,4.21667878966063,0.239624855491583,0,0,0.579125226670317,0.61642896765115,0.358121926479791,0,0.197030760201927,0,0.385029108839245,0.254094624222463,0,0,0,0,27.7132598860457,56.8406772487647,44.7568754510918,1.59498939234882,1.00034104211935,1.89885516589815,0.831883446123229,3.39015078714607,2.52323864054295,1.05427273493442,0,0,0,0.664225598535437,0.553107505625109,1.04260337361699,0.587403472388222,0.343143423810856,3.92859249633486,6.25571182373989,1.06727557803444,0,0,0,0.744323423456331,1.07423381301644,0.561320188866147,3.20347873139252,2.55853624533352,2.0911009748669,8.90508398669946,7.40206530252747,2.84098760501003,2.13530605635904,6.23105315020345,4.64841513839837,0,0,0,0.34444334449382,1.0925470080403,0.917870904715969,0,0.15403067420883,0,0,0.105551628892876,12.5106722477986,3.40187410553031,4.53423423814493,9.25363516141736,0.541892875087706,0.501689773854853,0.254876273045038,0,0,0.219259876645935,0.261435451024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| ||
|short_description=p1@HLX | |short_description=p1@HLX | ||
}} | }} |
Latest revision as of 06:57, 25 September 2015
Short description: | p1@HLX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HLX_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 33bp_to_NM_021958, uc001hmv.3_5end |
EntrezGene: | HLX |
HGNC: | 4978 |
UniProt: | Q14774 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 7.89e-23 | 67 |
macrophage dendritic cell progenitor | 1.10e-22 | 61 |
myeloid leukocyte | 1.35e-22 | 72 |
monopoietic cell | 7.19e-22 | 59 |
monocyte | 7.19e-22 | 59 |
monoblast | 7.19e-22 | 59 |
promonocyte | 7.19e-22 | 59 |
myeloid lineage restricted progenitor cell | 2.34e-20 | 66 |
defensive cell | 4.76e-20 | 48 |
phagocyte | 4.76e-20 | 48 |
classical monocyte | 6.06e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.06e-20 | 42 |
myeloid cell | 6.97e-20 | 108 |
common myeloid progenitor | 6.97e-20 | 108 |
multi fate stem cell | 3.66e-14 | 427 |
somatic stem cell | 4.76e-13 | 433 |
endothelial cell | 5.89e-13 | 36 |
stem cell | 4.07e-12 | 441 |
mesodermal cell | 2.22e-10 | 121 |
connective tissue cell | 1.45e-09 | 361 |
mesenchymal cell | 2.47e-09 | 354 |
meso-epithelial cell | 3.34e-09 | 45 |
endothelial cell of vascular tree | 2.49e-08 | 24 |
lining cell | 5.54e-08 | 58 |
barrier cell | 5.54e-08 | 58 |
blood vessel endothelial cell | 1.35e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.35e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.43e-35 | 203 |
mesoderm | 7.52e-34 | 315 |
mesoderm-derived structure | 7.52e-34 | 315 |
presumptive mesoderm | 7.52e-34 | 315 |
hemolymphoid system | 2.44e-29 | 108 |
hematopoietic system | 1.82e-27 | 98 |
blood island | 1.82e-27 | 98 |
immune system | 2.90e-23 | 93 |
bone marrow | 1.97e-22 | 76 |
musculoskeletal system | 9.82e-21 | 167 |
bone element | 4.68e-20 | 82 |
skeletal element | 6.30e-19 | 90 |
skeletal system | 3.02e-16 | 100 |
circulatory system | 6.00e-14 | 112 |
cardiovascular system | 9.97e-14 | 109 |
splanchnic layer of lateral plate mesoderm | 4.27e-10 | 83 |
connective tissue | 2.39e-09 | 371 |
vessel | 2.62e-09 | 68 |
tissue | 1.34e-08 | 773 |
epithelial tube open at both ends | 7.14e-08 | 59 |
blood vessel | 7.14e-08 | 59 |
blood vasculature | 7.14e-08 | 59 |
vascular cord | 7.14e-08 | 59 |
blood vessel endothelium | 1.35e-07 | 18 |
endothelium | 1.35e-07 | 18 |
cardiovascular system endothelium | 1.35e-07 | 18 |
vasculature | 3.71e-07 | 78 |
vascular system | 3.71e-07 | 78 |
blood | 4.25e-07 | 15 |
haemolymphatic fluid | 4.25e-07 | 15 |
organism substance | 4.25e-07 | 15 |