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FFCP PHASE1:Mm9::chr3:55046575..55046586,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:55046575..55046586,+
|DHSsupport=NA
|short_description=p6@Dclk1
|DPIdataset=NA
|description=CAGE_peak_6_at_Dclk1_5end
|association_with_transcript=47bp_to_ENSMUST00000107963_5end
|EntrezGene=13175
|EntrezGene=13175
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q8BRN4
|UniProt=Q8BRN4
|association_with_transcript=47bp_to_ENSMUST00000107963_5end
|cluster_id=chr3:55046575..55046586,+
|description=CAGE_peak_6_at_Dclk1_5end
|id=chr3:55046575..55046586,+
|ontology_enrichment_celltype=CL:0000540!2.73e-18!33;CL:0000047!2.73e-18!33;CL:0000031!2.73e-18!33;CL:0000404!2.73e-18!33;CL:0000393!2.82e-18!39;CL:0000211!2.82e-18!39;CL:0000221!1.74e-15!44;CL:0000133!1.74e-15!44;CL:0002319!2.73e-15!43;CL:0000055!5.48e-15!50;CL:0000117!8.44e-15!23;CL:0000337!8.44e-15!23;CL:0002321!8.39e-08!70;CL:0000220!8.39e-08!70
|ontology_enrichment_celltype_v019_2=CL:0000393,1.98e-25,39;CL:0000211,1.98e-25,39;CL:0000540,5.09e-25,33;CL:0000047,5.09e-25,33;CL:0000031,5.09e-25,33;CL:0000404,5.09e-25,33;CL:0000221,2.98e-20,44;CL:0000133,2.98e-20,44;CL:0000117,4.07e-20,23;CL:0000337,4.07e-20,23;CL:0002319,5.61e-20,43;CL:0002321,7.60e-12,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.39e-33!75;UBERON:0001016!2.39e-33!75;UBERON:0001017!3.51e-32!73;UBERON:0005743!3.51e-32!73;UBERON:0004121!9.45e-28!102;UBERON:0000924!9.45e-28!102;UBERON:0006601!9.45e-28!102;UBERON:0001049!9.76e-24!52;UBERON:0005068!9.76e-24!52;UBERON:0006241!9.76e-24!52;UBERON:0007135!9.76e-24!52;UBERON:0002346!1.97e-23!71;UBERON:0003075!1.97e-23!71;UBERON:0007284!1.97e-23!71;UBERON:0000955!3.49e-23!50;UBERON:0006238!3.49e-23!50;UBERON:0000033!8.22e-23!63;UBERON:0002616!1.91e-22!49;UBERON:0003056!9.04e-21!49;UBERON:0003080!2.31e-20!40;UBERON:0002780!9.96e-20!39;UBERON:0001890!9.96e-20!39;UBERON:0006240!9.96e-20!39;UBERON:0002020!5.56e-19!34;UBERON:0002791!2.46e-16!29;UBERON:0003528!2.46e-16!29;UBERON:0001893!2.46e-16!29;UBERON:0000956!2.31e-11!21;UBERON:0001869!2.31e-11!21;UBERON:0000203!2.31e-11!21;UBERON:0000153!3.77e-11!94;UBERON:0007811!7.61e-11!86;UBERON:0002619!2.30e-09!17;UBERON:0002021!3.36e-08!10;UBERON:0000411!3.36e-08!10;UBERON:0001950!3.36e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.84e-40,75;UBERON:0001017,1.86e-38,73;UBERON:0004121,1.10e-31,95;UBERON:0000924,1.10e-31,95;UBERON:0006601,1.10e-31,95;UBERON:0000073,1.91e-29,54;UBERON:0001049,2.41e-27,52;UBERON:0005068,2.41e-27,52;UBERON:0006241,2.41e-27,52;UBERON:0007135,2.41e-27,52;UBERON:0002346,1.54e-26,64;UBERON:0003075,1.54e-26,64;UBERON:0007284,1.54e-26,64;UBERON:0002020,5.56e-26,34;UBERON:0003080,8.12e-25,40;UBERON:0002780,6.04e-24,39;UBERON:0001890,6.04e-24,39;UBERON:0006240,6.04e-24,39;UBERON:0000955,8.01e-24,47;UBERON:0006238,8.01e-24,47;UBERON:0010371,4.25e-23,73;UBERON:0002616,7.28e-23,46;UBERON:0003528,2.89e-22,29;UBERON:0002791,2.89e-22,29;UBERON:0001893,2.89e-22,29;UBERON:0003056,5.38e-22,49;UBERON:0010314,6.78e-16,92;UBERON:0000956,2.75e-15,21;UBERON:0001869,2.75e-15,21;UBERON:0000203,2.75e-15,21;UBERON:0002619,1.73e-12,17;UBERON:0002021,7.21e-11,10;UBERON:0000411,7.21e-11,10;UBERON:0001950,7.21e-11,10;UBERON:0002420,3.66e-08,8;UBERON:0007245,3.66e-08,8;UBERON:0010009,3.66e-08,8;UBERON:0010011,3.66e-08,8;UBERON:0000454,3.66e-08,8;UBERON:0000025,5.81e-07,114;UBERON:0000010,9.15e-07,11
|phase1_expression=2.88267924788629,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.11514624341466,2.0190142737785,0,0.436050312760893,0,0.194429899074283,0.139986421625363,0,0,0,0,1.02903774414379,1.43266719969378,0,11.7343547298567,13.2247744818008,14.5781222806421,0,0,0,0.988866362566974,0,0.299600110518405,1.15265491596466,3.94020526772215,3.78016627328734,2.3135745748652,2.28520787523043,1.76694832761291,6.00204916153275,5.94241920313065,2.75765635983006,11.0115880999389,4.85211884723713,5.06901559745603,12.7929699098288,12.6252948171325,6.25096044668112,4.74611098302348,3.93933827022176,4.88954392885792,6.77645746589436,4.55589378557129,6.71038004971082,2.80186915332781,2.87171928405785,0.289864488701678,0,0,0,0,0,0.140444420131752,0.852151612890289,0.259786004602869,1.7666978725517,1.26759077799012,1.28326477414318,0,0,0,0,0.505524445014783,0.11418387971906,0.258937883647172,0,0.173485326766136,0.913396434936424,0.230615497256059,0.452167921657868,0.587943535678524,0,0,0.289198713839823,0,0.485300549842228,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,5.09288173976397,3.66000482254901,5.15182843662744,5.38855392596057,2.55715457330331,4.36354893575076,3.89379031362618,0.712875546952214,0,0,0.210441855886474,0.520481771850815,0.919608417733892,1.98068342785884,1.50704817835715,1.29269348387523,1.2811372028485,0.655912071918102,0.258703370739016,0,0.567318240503458,1.05570674498369,0.876782929710299,0.556094498451196,1.74126083261083,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.703578179943289,0,0.473489471170421,0.196764231747404,0,0,0,0.233530684734339,0.493679549740441,0,0,0,0,0,5.88811855979556,6.48299057989492,0.330418782983798,0,0.213288250535234,1.39342003116263,0.38660238396628,0.605050573870028,0.889512175379481,0,0,0.494096864172033,0.251335208800269,0,0,0,0,0,0.569003702859245,0.571242563048644,0,0.610953983535943,0.775809948670503,0.701358198903186,0.632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0,0,0,0.390267295715598,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,5.29816946959713,3.6335622843583,0.163934945376675,0,1.26203287766503,1.56175497718655,3.23135096599198,1.91175038362042,2.45078541490634,3.67999490025482,1.61924280669958,1.75353514746787,3.16230222357219,7.39039027770156,0,0.35613120733451,0.977321756121456,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,5.10659408630682,2.34079422240703,0.517434735131018,0.857348140126369,2.48276327099183,2.31879462882692,2.46823530903181,0.913394847343798,0,0.21183207086382,0,0.65954501176592,0.161464426695906,0.361877549568935,0.238744688006273,0,0,2.78137953015765,0.512612642393558,0,0.370389054739423,0,0,0.457556346413045,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0.448549638131936,0,0,0.258319646955462,0,0.234714477291508,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,11.2950368523413,10.1271552031579,10.3121192419091,7.56154002312225,9.59115527678899,8.3093328712867,6.07520250208625,4.95353323546643,5.89085131679466,8.28416498802912,1.45302286617847,4.38927360741134,2.04880326904961,1.21553358534147,1.25767897576789,1.2869045591501,2.22246727801615,1.64828045791115,1.28367683836726,3.03236654116557,2.28131369901216,2.64076877940507,0.749132059759059,1.85672941974121,1.37845125493472,0.952587382566147,2.20180219295225,2.31491064556446,4.12085900803307,1.61918812147837,2.40008476669791,1.59728225543404,0.953744759789284,2.32554266611726,1.97629698872194,1.4384483341585,3.10977553883713,1.8414879800649,2.17286582153379,2.24456908663095,1.89816028998679,1.28055827088233,0,2.16911577660352,1.54325288784913,1.74867404556562,0.467863216890817,1.07435527024149,0.382576664137687,0.220591419119515,1.15933917810211
|phase1_expression=2.88267924788629,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.11514624341466,2.0190142737785,0,0.436050312760893,0,0.194429899074283,0.139986421625363,0,0,0,0,1.02903774414379,1.43266719969378,0,11.7343547298567,13.2247744818008,14.5781222806421,0,0,0,0.988866362566974,0,0.299600110518405,1.15265491596466,3.94020526772215,3.78016627328734,2.3135745748652,2.28520787523043,1.76694832761291,6.00204916153275,5.94241920313065,2.75765635983006,11.0115880999389,4.85211884723713,5.06901559745603,12.7929699098288,12.6252948171325,6.25096044668112,4.74611098302348,3.93933827022176,4.88954392885792,6.77645746589436,4.55589378557129,6.71038004971082,2.80186915332781,2.87171928405785,0.289864488701678,0,0,0,0,0,0.140444420131752,0.852151612890289,0.259786004602869,1.7666978725517,1.26759077799012,1.28326477414318,0,0,0,0,0.505524445014783,0.11418387971906,0.258937883647172,0,0.173485326766136,0.913396434936424,0.230615497256059,0.452167921657868,0.587943535678524,0,0,0.289198713839823,0,0.485300549842228,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,5.09288173976397,3.66000482254901,5.15182843662744,5.38855392596057,2.55715457330331,4.36354893575076,3.89379031362618,0.712875546952214,0,0,0.210441855886474,0.520481771850815,0.919608417733892,1.98068342785884,1.50704817835715,1.29269348387523,1.2811372028485,0.655912071918102,0.258703370739016,0,0.567318240503458,1.05570674498369,0.876782929710299,0.556094498451196,1.74126083261083,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.703578179943289,0,0.473489471170421,0.196764231747404,0,0,0,0.233530684734339,0.493679549740441,0,0,0,0,0,5.88811855979556,6.48299057989492,0.330418782983798,0,0.213288250535234,1.39342003116263,0.38660238396628,0.605050573870028,0.889512175379481,0,0,0.494096864172033,0.251335208800269,0,0,0,0,0,0.569003702859245,0.571242563048644,0,0.610953983535943,0.775809948670503,0.701358198903186,0.632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0,0,0,0.390267295715598,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,5.29816946959713,3.6335622843583,0.163934945376675,0,1.26203287766503,1.56175497718655,3.23135096599198,1.91175038362042,2.45078541490634,3.67999490025482,1.61924280669958,1.75353514746787,3.16230222357219,7.39039027770156,0,0.35613120733451,0.977321756121456,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,5.10659408630682,2.34079422240703,0.517434735131018,0.857348140126369,2.48276327099183,2.31879462882692,2.46823530903181,0.913394847343798,0,0.21183207086382,0,0.65954501176592,0.161464426695906,0.361877549568935,0.238744688006273,0,0,2.78137953015765,0.512612642393558,0,0.370389054739423,0,0,0.457556346413045,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0.448549638131936,0,0,0.258319646955462,0,0.234714477291508,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,11.2950368523413,10.1271552031579,10.3121192419091,7.56154002312225,9.59115527678899,8.3093328712867,6.07520250208625,4.95353323546643,5.89085131679466,8.28416498802912,1.45302286617847,4.38927360741134,2.04880326904961,1.21553358534147,1.25767897576789,1.2869045591501,2.22246727801615,1.64828045791115,1.28367683836726,3.03236654116557,2.28131369901216,2.64076877940507,0.749132059759059,1.85672941974121,1.37845125493472,0.952587382566147,2.20180219295225,2.31491064556446,4.12085900803307,1.61918812147837,2.40008476669791,1.59728225543404,0.953744759789284,2.32554266611726,1.97629698872194,1.4384483341585,3.10977553883713,1.8414879800649,2.17286582153379,2.24456908663095,1.89816028998679,1.28055827088233,0,2.16911577660352,1.54325288784913,1.74867404556562,0.467863216890817,1.07435527024149,0.382576664137687,0.220591419119515,1.15933917810211
|short_description=p6@Dclk1
}}
}}

Latest revision as of 14:32, 25 September 2015

Short description:p6@Dclk1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Dclk1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 47bp_to_ENSMUST00000107963_5end
EntrezGene:Dclk1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Dclk1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C311.73
Mouse Granule cells, donor2.CNhs12357.11731-123E313.22
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D92.80
Mouse Schwann, donor2.CNhs12573.11746-123F92.87
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F15.15
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.89
hippocampus, neonate N00.CNhs11228.627-43G16.48
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell1.98e-2539
electrically active cell1.98e-2539
neuron5.09e-2533
neuronal stem cell5.09e-2533
neuroblast5.09e-2533
electrically signaling cell5.09e-2533
ectodermal cell2.98e-2044
neurectodermal cell2.98e-2044
CNS neuron (sensu Vertebrata)4.07e-2023
neuroblast (sensu Vertebrata)4.07e-2023
neural cell5.61e-2043
embryonic cell7.60e-1270

Uber anatomy
Ontology termp-valuen
nervous system4.84e-4075
central nervous system1.86e-3873
ectoderm-derived structure1.10e-3195
ectoderm1.10e-3195
presumptive ectoderm1.10e-3195
regional part of nervous system1.91e-2954
neural tube2.41e-2752
neural rod2.41e-2752
future spinal cord2.41e-2752
neural keel2.41e-2752
neurectoderm1.54e-2664
neural plate1.54e-2664
presumptive neural plate1.54e-2664
gray matter5.56e-2634
anterior neural tube8.12e-2540
regional part of forebrain6.04e-2439
forebrain6.04e-2439
future forebrain6.04e-2439
brain8.01e-2447
future brain8.01e-2447
ecto-epithelium4.25e-2373
regional part of brain7.28e-2346
brain grey matter2.89e-2229
regional part of telencephalon2.89e-2229
telencephalon2.89e-2229
pre-chordal neural plate5.38e-2249
structure with developmental contribution from neural crest6.78e-1692
cerebral cortex2.75e-1521
cerebral hemisphere2.75e-1521
pallium2.75e-1521
regional part of cerebral cortex1.73e-1217
occipital lobe7.21e-1110
visual cortex7.21e-1110
neocortex7.21e-1110
basal ganglion3.66e-088
nuclear complex of neuraxis3.66e-088
aggregate regional part of brain3.66e-088
collection of basal ganglia3.66e-088
cerebral subcortex3.66e-088
tube5.81e-07114
peripheral nervous system9.15e-0711
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