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FFCP PHASE1:Mm9::chr3:7366589..7366594,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18767
|EntrezGene=18767
|HGNC=
|HGNC=
|MCL_coexpression_id=295
|TSSclassifier=NA
|UniProt=P63248,Q3UTL0
|UniProt=P63248,Q3UTL0
|association_with_transcript=-9bp_to_ENSMUST00000028999,NM_008862,uc008oof.1_5end
|association_with_transcript=-9bp_to_ENSMUST00000028999,NM_008862,uc008oof.1_5end
|cluster_id=chr3:7366589..7366594,+
|description=CAGE_peak_4_at_Pkia_5end
|description=CAGE_peak_4_at_Pkia_5end
|id=chr3:7366589..7366594,+
|id=chr3:7366589..7366594,+
|ontology_enrichment_celltype=CL:0000117!1.60e-14!23;CL:0000337!1.60e-14!23;CL:0000540!6.52e-10!33;CL:0000047!6.52e-10!33;CL:0000031!6.52e-10!33;CL:0000404!6.52e-10!33;CL:0000393!2.12e-09!39;CL:0000211!2.12e-09!39
|ontology_enrichment_celltype=CL:0000117!1.60e-14!23;CL:0000337!1.60e-14!23;CL:0000540!6.52e-10!33;CL:0000047!6.52e-10!33;CL:0000031!6.52e-10!33;CL:0000404!6.52e-10!33;CL:0000393!2.12e-09!39;CL:0000211!2.12e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.01e-26,23;CL:0000337,1.01e-26,23;CL:0000540,5.55e-17,33;CL:0000047,5.55e-17,33;CL:0000031,5.55e-17,33;CL:0000404,5.55e-17,33;CL:0000393,1.47e-13,39;CL:0000211,1.47e-13,39;CL:0002319,8.12e-12,43;CL:0000221,1.97e-11,44;CL:0000133,1.97e-11,44;CL:0002609,5.63e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!8.43e-22!52;UBERON:0005068!8.43e-22!52;UBERON:0006241!8.43e-22!52;UBERON:0007135!8.43e-22!52;UBERON:0000033!3.18e-21!63;UBERON:0000955!8.26e-21!50;UBERON:0006238!8.26e-21!50;UBERON:0002616!3.96e-20!49;UBERON:0001017!6.32e-20!73;UBERON:0005743!6.32e-20!73;UBERON:0000073!6.94e-20!75;UBERON:0001016!6.94e-20!75;UBERON:0002020!4.90e-19!34;UBERON:0002346!6.33e-18!71;UBERON:0003075!6.33e-18!71;UBERON:0007284!6.33e-18!71;UBERON:0003056!1.21e-17!49;UBERON:0003080!6.84e-17!40;UBERON:0004121!9.44e-17!102;UBERON:0000924!9.44e-17!102;UBERON:0006601!9.44e-17!102;UBERON:0002780!2.93e-16!39;UBERON:0001890!2.93e-16!39;UBERON:0006240!2.93e-16!39;UBERON:0002791!4.82e-16!29;UBERON:0003528!4.82e-16!29;UBERON:0001893!4.82e-16!29;UBERON:0000956!2.33e-11!21;UBERON:0001869!2.33e-11!21;UBERON:0000203!2.33e-11!21;UBERON:0007811!1.59e-09!86;UBERON:0002619!8.70e-09!17;UBERON:0000025!9.09e-09!114;UBERON:0000153!1.65e-08!94;UBERON:0004111!5.07e-08!122;UBERON:0002021!6.46e-08!10;UBERON:0000411!6.46e-08!10;UBERON:0001950!6.46e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.88e-47,54;UBERON:0001049,2.34e-41,52;UBERON:0005068,2.34e-41,52;UBERON:0006241,2.34e-41,52;UBERON:0007135,2.34e-41,52;UBERON:0002020,8.45e-41,34;UBERON:0001017,2.20e-40,73;UBERON:0001016,5.01e-39,75;UBERON:0000955,1.19e-38,47;UBERON:0006238,1.19e-38,47;UBERON:0002616,4.98e-37,46;UBERON:0003528,9.25e-36,29;UBERON:0002791,9.25e-36,29;UBERON:0001893,9.25e-36,29;UBERON:0003080,4.03e-33,40;UBERON:0002346,8.53e-32,64;UBERON:0003075,8.53e-32,64;UBERON:0007284,8.53e-32,64;UBERON:0002780,1.37e-31,39;UBERON:0001890,1.37e-31,39;UBERON:0006240,1.37e-31,39;UBERON:0004121,1.39e-28,95;UBERON:0000924,1.39e-28,95;UBERON:0006601,1.39e-28,95;UBERON:0010371,1.09e-26,73;UBERON:0000956,2.33e-26,21;UBERON:0001869,2.33e-26,21;UBERON:0000203,2.33e-26,21;UBERON:0003056,1.46e-25,49;UBERON:0002619,7.95e-20,17;UBERON:0010314,3.33e-19,92;UBERON:0002021,1.11e-17,10;UBERON:0000411,1.11e-17,10;UBERON:0001950,1.11e-17,10;UBERON:0000025,1.31e-14,114;UBERON:0004111,5.04e-13,122;UBERON:0002420,3.09e-10,8;UBERON:0007245,3.09e-10,8;UBERON:0010009,3.09e-10,8;UBERON:0010011,3.09e-10,8;UBERON:0000454,3.09e-10,8;UBERON:0000369,8.10e-09,5;UBERON:0002435,8.10e-09,5;UBERON:0000204,8.10e-09,5;UBERON:0010082,8.10e-09,5;UBERON:0011216,1.42e-08,194;UBERON:0003076,2.55e-08,12;UBERON:0003057,2.55e-08,12
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0.515672092277442,2.02316460859598,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,2.7996195323289,2.8351247049655,3.78584930432488,1.14260393761521,0.883474163806454,4.89963196859816,2.49198224647415,0.919218786610021,3.30347642998166,2.042997409363,1.22885226604995,1.97829431595291,1.82975287204819,1.56274011167028,0.837548997004143,3.37657566019008,1.98637722109853,3.83017161115768,3.41692033917847,2.42319279572891,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0.681721290312231,0.259786004602869,0.35333957451034,0.704217098883403,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0,0.441683036920787,0.484875253135222,0,2.92780797011547,3.97948742945565,0,0,0,0,2.69623150928681,2.28750301409313,13.0680526197379,2.9550134432687,4.09144731728529,1.24672826735736,2.92034273521964,0.509196819251581,0,1.0108910337347,0.420883711772948,0.130120442962704,0.229902104433473,0.360124259610698,0.30140963567143,0.204109497453984,0.768682321709099,0.655912071918102,0.776110112217047,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0.36012412292203,0,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0.729619285912702,0.146199987425332,0.219550115291051,0.402619256281115,6.30869845692382,8.84979666461846,0,0,0,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0.193952487167626,0.140271639780637,0.252946148497029,0.147610147979602,0.31399745568275,0.493588655687202,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0,0,0.238043640886014,0,0.788175720530955,0.221464689648775,0.159454768657487,0.655453258862952,0.172684981865896,0,0,0,0,0,1.28440471990234,1.05490517932983,0,0,0,0.390438744296638,0,0,0,0.566153061577665,0,0.292255857911312,0.395287777946524,2.89189184779626,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0.388076051348264,0.214337035031592,0,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0.49465875882444,0.161464426695906,0.180938774784468,0.238744688006273,0,0,0.927126510052548,0,0.412773735926445,0,0,0,0.228778173206523,0.169978429993855,0.419854356970974,0,0.954670618015114,0.158167996790568,0.406638934253697,0,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0.598066184175915,0,0.777804753376191,0.387479470433193,0.337912250981556,0.938857909166032,0.2604087696879,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0.221985953374065,0,0,0.19318959403219,0,0.183151624267265,0,0,6.21227026878773,1.84130094602871,5.15605962095457,2.92150409984269,4.11049511862385,5.2877572817279,2.02506750069542,2.70192721934532,3.17199686288943,1.55328093525546,0.207574695168353,1.19707462020309,0.341467211508268,0.486213434136588,1.04806581313991,1.10306105070008,0.888986911206461,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.754505365544305,0.468207537349412,0.576226371643824,0.459483751644906,0.476293691283074,0.579421629724277,0.578727661391115,1.23625770240992,0.588795680537589,1.37147700954166,0,0.476872379894642,0.436039249896986,0.658765662907314,0.761531471025089,0.365855945745545,0.789209134313529,0.950628796921032,0.561142271657738,0.830445126869219,0.788035859004508,1.22769312950907,0.619747364743864,0.578719832943424,0.999242311751784,0.467863216890817,0,0.382576664137687,0,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0.515672092277442,2.02316460859598,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,2.7996195323289,2.8351247049655,3.78584930432488,1.14260393761521,0.883474163806454,4.89963196859816,2.49198224647415,0.919218786610021,3.30347642998166,2.042997409363,1.22885226604995,1.97829431595291,1.82975287204819,1.56274011167028,0.837548997004143,3.37657566019008,1.98637722109853,3.83017161115768,3.41692033917847,2.42319279572891,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0.681721290312231,0.259786004602869,0.35333957451034,0.704217098883403,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0,0.441683036920787,0.484875253135222,0,2.92780797011547,3.97948742945565,0,0,0,0,2.69623150928681,2.28750301409313,13.0680526197379,2.9550134432687,4.09144731728529,1.24672826735736,2.92034273521964,0.509196819251581,0,1.0108910337347,0.420883711772948,0.130120442962704,0.229902104433473,0.360124259610698,0.30140963567143,0.204109497453984,0.768682321709099,0.655912071918102,0.776110112217047,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0.36012412292203,0,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0.729619285912702,0.146199987425332,0.219550115291051,0.402619256281115,6.30869845692382,8.84979666461846,0,0,0,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0.193952487167626,0.140271639780637,0.252946148497029,0.147610147979602,0.31399745568275,0.493588655687202,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0,0,0.238043640886014,0,0.788175720530955,0.221464689648775,0.159454768657487,0.655453258862952,0.172684981865896,0,0,0,0,0,1.28440471990234,1.05490517932983,0,0,0,0.390438744296638,0,0,0,0.566153061577665,0,0.292255857911312,0.395287777946524,2.89189184779626,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0.388076051348264,0.214337035031592,0,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0.49465875882444,0.161464426695906,0.180938774784468,0.238744688006273,0,0,0.927126510052548,0,0.412773735926445,0,0,0,0.228778173206523,0.169978429993855,0.419854356970974,0,0.954670618015114,0.158167996790568,0.406638934253697,0,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0.598066184175915,0,0.777804753376191,0.387479470433193,0.337912250981556,0.938857909166032,0.2604087696879,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0.221985953374065,0,0,0.19318959403219,0,0.183151624267265,0,0,6.21227026878773,1.84130094602871,5.15605962095457,2.92150409984269,4.11049511862385,5.2877572817279,2.02506750069542,2.70192721934532,3.17199686288943,1.55328093525546,0.207574695168353,1.19707462020309,0.341467211508268,0.486213434136588,1.04806581313991,1.10306105070008,0.888986911206461,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.754505365544305,0.468207537349412,0.576226371643824,0.459483751644906,0.476293691283074,0.579421629724277,0.578727661391115,1.23625770240992,0.588795680537589,1.37147700954166,0,0.476872379894642,0.436039249896986,0.658765662907314,0.761531471025089,0.365855945745545,0.789209134313529,0.950628796921032,0.561142271657738,0.830445126869219,0.788035859004508,1.22769312950907,0.619747364743864,0.578719832943424,0.999242311751784,0.467863216890817,0,0.382576664137687,0,0.695603506861264
|short_description=p4@Pkia
|short_description=p4@Pkia
}}
}}

Latest revision as of 16:46, 25 September 2015

Short description:p4@Pkia
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Pkia_5end
Coexpression cluster:MCL_coexpression_mm9:295
Association with transcript: -9bp_to_ENSMUST00000028999, NM_008862, uc008oof.1_5end
EntrezGene:Pkia
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Pkia

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F113.07
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G18.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.88e-4754
neural tube2.34e-4152
neural rod2.34e-4152
future spinal cord2.34e-4152
neural keel2.34e-4152
gray matter8.45e-4134
central nervous system2.20e-4073
nervous system5.01e-3975
brain1.19e-3847
future brain1.19e-3847
regional part of brain4.98e-3746
brain grey matter9.25e-3629
regional part of telencephalon9.25e-3629
telencephalon9.25e-3629
anterior neural tube4.03e-3340
neurectoderm8.53e-3264
neural plate8.53e-3264
presumptive neural plate8.53e-3264
regional part of forebrain1.37e-3139
forebrain1.37e-3139
future forebrain1.37e-3139
ectoderm-derived structure1.39e-2895
ectoderm1.39e-2895
presumptive ectoderm1.39e-2895
ecto-epithelium1.09e-2673
cerebral cortex2.33e-2621
cerebral hemisphere2.33e-2621
pallium2.33e-2621
pre-chordal neural plate1.46e-2549
regional part of cerebral cortex7.95e-2017
structure with developmental contribution from neural crest3.33e-1992
occipital lobe1.11e-1710
visual cortex1.11e-1710
neocortex1.11e-1710
tube1.31e-14114
anatomical conduit5.04e-13122
basal ganglion3.09e-108
nuclear complex of neuraxis3.09e-108
aggregate regional part of brain3.09e-108
collection of basal ganglia3.09e-108
cerebral subcortex3.09e-108
corpus striatum8.10e-095
striatum8.10e-095
ventral part of telencephalon8.10e-095
future corpus striatum8.10e-095
organ system subdivision1.42e-08194
posterior neural tube2.55e-0812
chordal neural plate2.55e-0812
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