FFCP PHASE1:Mm9::chr11:76391174..76391197,-: Difference between revisions
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{{FFCP|EntrezGene=109934|HGNC=|MCL_coexpression_id=20|UniProt=E9PUE7,Q5SSL4|association_with_transcript=31bp_to_NM_198894,uc007kfu.1_5end|description=CAGE_peak_19_at_Abr_5end|id=chr11:76391174..76391197,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.56e-09,3;CL:0002614,3.59e-09,3;CL:0000117,3.44e-08,23;CL:0000337,3.44e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.21e-23!52;UBERON:0005068!6.21e-23!52;UBERON:0006241!6.21e-23!52;UBERON:0007135!6.21e-23!52;UBERON:0000955!1.06e-22!50;UBERON:0006238!1.06e-22!50;UBERON:0001017!1.13e-22!73;UBERON:0005743!1.13e-22!73;UBERON:0000073!8.23e-22!75;UBERON:0001016!8.23e-22!75;UBERON:0002616!1.66e-21!49;UBERON:0000033!5.78e-19!63;UBERON:0002020!2.71e-18!34;UBERON:0002346!3.67e-18!71;UBERON:0003075!3.67e-18!71;UBERON:0007284!3.67e-18!71;UBERON:0002021!4.15e-17!10;UBERON:0000411!4.15e-17!10;UBERON:0001950!4.15e-17!10;UBERON:0004121!1.71e-16!102;UBERON:0000924!1.71e-16!102;UBERON:0006601!1.71e-16!102;UBERON:0002791!2.64e-14!29;UBERON:0003528!2.64e-14!29;UBERON:0001893!2.64e-14!29;UBERON:0003080!1.08e-13!40;UBERON:0002619!5.77e-13!17;UBERON:0002780!1.79e-12!39;UBERON:0001890!1.79e-12!39;UBERON:0006240!1.79e-12!39;UBERON:0003056!2.02e-12!49;UBERON:0000956!6.43e-12!21;UBERON:0001869!6.43e-12!21;UBERON:0000203!6.43e-12!21;UBERON:0002298!8.05e-12!6;UBERON:0007811!1.08e-11!86;UBERON:0003076!9.12e-11!12;UBERON:0003057!9.12e-11!12;UBERON:0000153!5.06e-10!94;UBERON:0004111!1.54e-08!122;UBERON:0000025!3.20e-08!114;UBERON:0002950!3.38e-08!4;UBERON:0001891!3.38e-08!4;UBERON:0009616!3.38e-08!4;UBERON:0002240!3.89e-07!6;UBERON:0005174!3.89e-07!6;UBERON:0001137!3.89e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.55e-38,54;UBERON:0001049,1.05e-33,52;UBERON:0005068,1.05e-33,52;UBERON:0006241,1.05e-33,52;UBERON:0007135,1.05e-33,52;UBERON:0001017,3.82e-31,73;UBERON:0001016,3.70e-30,75;UBERON:0000955,3.09e-29,47;UBERON:0006238,3.09e-29,47;UBERON:0002616,1.85e-27,46;UBERON:0002346,2.39e-26,64;UBERON:0003075,2.39e-26,64;UBERON:0007284,2.39e-26,64;UBERON:0002021,8.20e-26,10;UBERON:0000411,8.20e-26,10;UBERON:0001950,8.20e-26,10;UBERON:0002020,1.03e-24,34;UBERON:0004121,1.43e-22,95;UBERON:0000924,1.43e-22,95;UBERON:0006601,1.43e-22,95;UBERON:0010371,2.05e-22,73;UBERON:0003080,3.62e-21,40;UBERON:0003528,5.90e-21,29;UBERON:0002791,5.90e-21,29;UBERON:0001893,5.90e-21,29;UBERON:0002780,3.09e-19,39;UBERON:0001890,3.09e-19,39;UBERON:0006240,3.09e-19,39;UBERON:0002619,1.97e-17,17;UBERON:0010314,1.25e-16,92;UBERON:0000956,1.52e-16,21;UBERON:0001869,1.52e-16,21;UBERON:0000203,1.52e-16,21;UBERON:0003056,1.68e-16,49;UBERON:0003076,2.25e-13,12;UBERON:0003057,2.25e-13,12;UBERON:0000025,2.48e-12,114;UBERON:0002950,6.61e-12,4;UBERON:0001891,6.61e-12,4;UBERON:0009616,6.61e-12,4;UBERON:0010286,6.61e-12,4;UBERON:0004111,3.75e-11,122;UBERON:0004684,1.56e-09,3;UBERON:0002275,1.56e-09,3;UBERON:0002038,3.59e-09,3;UBERON:0009663,3.59e-09,3;UBERON:0009661,3.59e-09,3;UBERON:0000125,3.59e-09,3;UBERON:0002308,3.59e-09,3;UBERON:0011216,6.09e-08,194;UBERON:0004733,1.09e-07,6;UBERON:0004732,1.09e-07,6;UBERON:0002028,1.09e-07,6;UBERON:0007277,1.09e-07,6;UBERON:0001896,2.81e-07,2;UBERON:0002298,2.81e-07,2;UBERON:0005290,2.81e-07,2;UBERON:0010096,2.81e-07,2;UBERON:0002240,3.33e-07,6;UBERON:0005174,3.33e-07,6;UBERON:0001137,3.33e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,0.384218305321555,0,0,0,1.14260393761521,1.32521124570968,0,0,0,3.30347642998166,6.63974158042976,8.75557239560588,0,0,0,7.53794097303729,2.8138130501584,3.51435969886663,1.47314292736834,0.284743361598206,0,0,0,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.34224637609238,1.25668024088073,0,0,0,0,7.33974133083631,1.37250180845588,0,4.34560800480691,3.83573185995496,6.85700547046548,3.89379031362618,0,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6834966090356,7.61875962849321,0.163934945376675,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,17.2445530869774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,3.95326289831947,3.22227665555024,3.43737308063638,3.09335728218638,2.74033007908257,3.7769694869485,4.72515750162264,1.35096360967266,4.07828168085784,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p19@Abr}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109934 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=E9PUE7,Q5SSL4 | |||
|association_with_transcript=31bp_to_NM_198894,uc007kfu.1_5end | |||
|cluster_id=chr11:76391174..76391197,- | |||
|description=CAGE_peak_19_at_Abr_5end | |||
|id=chr11:76391174..76391197,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.56e-09,3;CL:0002614,3.59e-09,3;CL:0000117,3.44e-08,23;CL:0000337,3.44e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.21e-23!52;UBERON:0005068!6.21e-23!52;UBERON:0006241!6.21e-23!52;UBERON:0007135!6.21e-23!52;UBERON:0000955!1.06e-22!50;UBERON:0006238!1.06e-22!50;UBERON:0001017!1.13e-22!73;UBERON:0005743!1.13e-22!73;UBERON:0000073!8.23e-22!75;UBERON:0001016!8.23e-22!75;UBERON:0002616!1.66e-21!49;UBERON:0000033!5.78e-19!63;UBERON:0002020!2.71e-18!34;UBERON:0002346!3.67e-18!71;UBERON:0003075!3.67e-18!71;UBERON:0007284!3.67e-18!71;UBERON:0002021!4.15e-17!10;UBERON:0000411!4.15e-17!10;UBERON:0001950!4.15e-17!10;UBERON:0004121!1.71e-16!102;UBERON:0000924!1.71e-16!102;UBERON:0006601!1.71e-16!102;UBERON:0002791!2.64e-14!29;UBERON:0003528!2.64e-14!29;UBERON:0001893!2.64e-14!29;UBERON:0003080!1.08e-13!40;UBERON:0002619!5.77e-13!17;UBERON:0002780!1.79e-12!39;UBERON:0001890!1.79e-12!39;UBERON:0006240!1.79e-12!39;UBERON:0003056!2.02e-12!49;UBERON:0000956!6.43e-12!21;UBERON:0001869!6.43e-12!21;UBERON:0000203!6.43e-12!21;UBERON:0002298!8.05e-12!6;UBERON:0007811!1.08e-11!86;UBERON:0003076!9.12e-11!12;UBERON:0003057!9.12e-11!12;UBERON:0000153!5.06e-10!94;UBERON:0004111!1.54e-08!122;UBERON:0000025!3.20e-08!114;UBERON:0002950!3.38e-08!4;UBERON:0001891!3.38e-08!4;UBERON:0009616!3.38e-08!4;UBERON:0002240!3.89e-07!6;UBERON:0005174!3.89e-07!6;UBERON:0001137!3.89e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.55e-38,54;UBERON:0001049,1.05e-33,52;UBERON:0005068,1.05e-33,52;UBERON:0006241,1.05e-33,52;UBERON:0007135,1.05e-33,52;UBERON:0001017,3.82e-31,73;UBERON:0001016,3.70e-30,75;UBERON:0000955,3.09e-29,47;UBERON:0006238,3.09e-29,47;UBERON:0002616,1.85e-27,46;UBERON:0002346,2.39e-26,64;UBERON:0003075,2.39e-26,64;UBERON:0007284,2.39e-26,64;UBERON:0002021,8.20e-26,10;UBERON:0000411,8.20e-26,10;UBERON:0001950,8.20e-26,10;UBERON:0002020,1.03e-24,34;UBERON:0004121,1.43e-22,95;UBERON:0000924,1.43e-22,95;UBERON:0006601,1.43e-22,95;UBERON:0010371,2.05e-22,73;UBERON:0003080,3.62e-21,40;UBERON:0003528,5.90e-21,29;UBERON:0002791,5.90e-21,29;UBERON:0001893,5.90e-21,29;UBERON:0002780,3.09e-19,39;UBERON:0001890,3.09e-19,39;UBERON:0006240,3.09e-19,39;UBERON:0002619,1.97e-17,17;UBERON:0010314,1.25e-16,92;UBERON:0000956,1.52e-16,21;UBERON:0001869,1.52e-16,21;UBERON:0000203,1.52e-16,21;UBERON:0003056,1.68e-16,49;UBERON:0003076,2.25e-13,12;UBERON:0003057,2.25e-13,12;UBERON:0000025,2.48e-12,114;UBERON:0002950,6.61e-12,4;UBERON:0001891,6.61e-12,4;UBERON:0009616,6.61e-12,4;UBERON:0010286,6.61e-12,4;UBERON:0004111,3.75e-11,122;UBERON:0004684,1.56e-09,3;UBERON:0002275,1.56e-09,3;UBERON:0002038,3.59e-09,3;UBERON:0009663,3.59e-09,3;UBERON:0009661,3.59e-09,3;UBERON:0000125,3.59e-09,3;UBERON:0002308,3.59e-09,3;UBERON:0011216,6.09e-08,194;UBERON:0004733,1.09e-07,6;UBERON:0004732,1.09e-07,6;UBERON:0002028,1.09e-07,6;UBERON:0007277,1.09e-07,6;UBERON:0001896,2.81e-07,2;UBERON:0002298,2.81e-07,2;UBERON:0005290,2.81e-07,2;UBERON:0010096,2.81e-07,2;UBERON:0002240,3.33e-07,6;UBERON:0005174,3.33e-07,6;UBERON:0001137,3.33e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,0.384218305321555,0,0,0,1.14260393761521,1.32521124570968,0,0,0,3.30347642998166,6.63974158042976,8.75557239560588,0,0,0,7.53794097303729,2.8138130501584,3.51435969886663,1.47314292736834,0.284743361598206,0,0,0,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.34224637609238,1.25668024088073,0,0,0,0,7.33974133083631,1.37250180845588,0,4.34560800480691,3.83573185995496,6.85700547046548,3.89379031362618,0,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6834966090356,7.61875962849321,0.163934945376675,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,17.2445530869774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,3.95326289831947,3.22227665555024,3.43737308063638,3.09335728218638,2.74033007908257,3.7769694869485,4.72515750162264,1.35096360967266,4.07828168085784,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p19@Abr | |||
}} |
Latest revision as of 17:03, 25 September 2015
Short description: | p19@Abr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_Abr_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 31bp_to_NM_198894, uc007kfu.1_5end |
EntrezGene: | Abr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.56e-09 | 3 |
neuron of the substantia nigra | 3.59e-09 | 3 |
CNS neuron (sensu Vertebrata) | 3.44e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.44e-08 | 23 |