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{{FFCP|EntrezGene=268859|HGNC=|MCL_coexpression_id=39|UniProt=|association_with_transcript=83bp_to_uc007yce.2_5end|description=CAGE_peak_3_at_Rbfox1_5end|id=chr16:6349212..6349238,+|ontology_enrichment_celltype=CL:0000117!9.94e-14!23;CL:0000337!9.94e-14!23;CL:0000540!7.25e-08!33;CL:0000047!7.25e-08!33;CL:0000031!7.25e-08!33;CL:0000404!7.25e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.22e-18,23;CL:0000337,2.22e-18,23;CL:0000540,3.02e-10,33;CL:0000047,3.02e-10,33;CL:0000031,3.02e-10,33;CL:0000404,3.02e-10,33;CL:0000393,1.67e-07,39;CL:0000211,1.67e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.25e-19!71;UBERON:0003075!1.25e-19!71;UBERON:0007284!1.25e-19!71;UBERON:0001049!1.35e-19!52;UBERON:0005068!1.35e-19!52;UBERON:0006241!1.35e-19!52;UBERON:0007135!1.35e-19!52;UBERON:0002020!6.55e-19!34;UBERON:0000955!2.32e-18!50;UBERON:0006238!2.32e-18!50;UBERON:0002616!7.85e-18!49;UBERON:0000033!3.96e-17!63;UBERON:0001017!2.06e-16!73;UBERON:0005743!2.06e-16!73;UBERON:0002791!6.85e-16!29;UBERON:0003528!6.85e-16!29;UBERON:0001893!6.85e-16!29;UBERON:0000073!1.27e-15!75;UBERON:0001016!1.27e-15!75;UBERON:0003056!1.36e-15!49;UBERON:0007811!3.76e-15!86;UBERON:0003080!5.58e-15!40;UBERON:0002780!2.49e-14!39;UBERON:0001890!2.49e-14!39;UBERON:0006240!2.49e-14!39;UBERON:0004121!5.41e-13!102;UBERON:0000924!5.41e-13!102;UBERON:0006601!5.41e-13!102;UBERON:0000153!8.24e-12!94;UBERON:0000025!1.09e-11!114;UBERON:0000956!2.77e-11!21;UBERON:0001869!2.77e-11!21;UBERON:0000203!2.77e-11!21;UBERON:0004111!8.41e-10!122;UBERON:0002619!8.08e-09!17;UBERON:0002021!1.13e-08!10;UBERON:0000411!1.13e-08!10;UBERON:0001950!1.13e-08!10;UBERON:0000477!2.89e-08!154;UBERON:0000483!5.71e-07!181|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.07e-26,34;UBERON:0000073,2.53e-26,54;UBERON:0001049,1.43e-24,52;UBERON:0005068,1.43e-24,52;UBERON:0006241,1.43e-24,52;UBERON:0007135,1.43e-24,52;UBERON:0002346,3.24e-23,64;UBERON:0003075,3.24e-23,64;UBERON:0007284,3.24e-23,64;UBERON:0003528,3.28e-22,29;UBERON:0002791,3.28e-22,29;UBERON:0001893,3.28e-22,29;UBERON:0001017,1.01e-20,73;UBERON:0000955,2.10e-20,47;UBERON:0006238,2.10e-20,47;UBERON:0002616,1.05e-19,46;UBERON:0001016,1.09e-19,75;UBERON:0010371,3.29e-18,73;UBERON:0003056,3.31e-18,49;UBERON:0003080,1.34e-17,40;UBERON:0002780,9.76e-17,39;UBERON:0001890,9.76e-17,39;UBERON:0006240,9.76e-17,39;UBERON:0004121,2.21e-16,95;UBERON:0000924,2.21e-16,95;UBERON:0006601,2.21e-16,95;UBERON:0000956,8.35e-16,21;UBERON:0001869,8.35e-16,21;UBERON:0000203,8.35e-16,21;UBERON:0010314,3.16e-14,92;UBERON:0002619,2.27e-12,17;UBERON:0002021,2.17e-11,10;UBERON:0000411,2.17e-11,10;UBERON:0001950,2.17e-11,10;UBERON:0000025,8.58e-08,114;UBERON:0003076,1.36e-07,12;UBERON:0003057,1.36e-07,12;UBERON:0002420,1.51e-07,8;UBERON:0007245,1.51e-07,8;UBERON:0010009,1.51e-07,8;UBERON:0010011,1.51e-07,8;UBERON:0000454,1.51e-07,8|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.0145887560134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85559506063035,5.28990979272033,1.90149421051854,0,0,0,0,0,0.599200221036809,0,9.02099627083756,5.94026128659439,9.88527318351495,6.28432165688368,6.84692476950002,4.28717797252339,4.02550978276593,2.75765635983006,7.70811166995721,8.42736431362239,8.90917892886212,8.17694983927202,10.3381037270723,4.16730696445408,6.70039197603314,6.75315132038016,5.50073691996516,8.54422897873636,10.1083893367363,5.40558392893372,0,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,2.05530983494308,0,0.742210695324124,0.867426633830679,0.913396434936424,1.15307748628029,0.60289056221049,1.76383060703557,0.376999773989026,0,2.31358971071859,0,0,0,0,0,92.2259510586373,104.723353406728,0,0,0,0,14.5296920222678,24.2475319493872,5.40313714085317,42.9346070874923,55.2345387833514,12.4672826735736,16.8730913590468,2.85150218780886,0.373220911830279,0.758168275301024,1.68353484709179,0.130120442962704,0,0.180062129805349,1.20563854268572,2.72145996605311,1.2811372028485,1.40552586839593,4.9153640440413,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0.720248245844059,0.946978942340841,1.18058539048442,0.771335564436891,0.232533944750408,0.268273401399619,0.700592054203017,0.493679549740441,0.164167464079095,0.729619285912702,0.584799949701329,1.09775057645525,1.47627060636409,16.1923260394378,7.61494131606705,0,0,0,0,0,0,0.444756087689741,0.570676878337677,0,0.164698954724011,0,0,0,0,0,0,0,0.456994050438915,0,0.407302655690628,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0,0,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.972811360650212,0,1.43768206527355,0.744281895337007,0,0,0.179397413521912,0,0.184753190166605,0.757965647081939,0.977789858652155,0.339490171550376,0.938760993154008,0.502518772325447,0.476087281772027,0.975668239288994,4.57141917907954,3.98636441367795,3.50800491046472,0.163863314715738,0.172684981865896,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=268859
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=
|association_with_transcript=83bp_to_uc007yce.2_5end
|cluster_id=chr16:6349212..6349238,+
|description=CAGE_peak_3_at_Rbfox1_5end
|id=chr16:6349212..6349238,+
|ontology_enrichment_celltype=CL:0000117!9.94e-14!23;CL:0000337!9.94e-14!23;CL:0000540!7.25e-08!33;CL:0000047!7.25e-08!33;CL:0000031!7.25e-08!33;CL:0000404!7.25e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.22e-18,23;CL:0000337,2.22e-18,23;CL:0000540,3.02e-10,33;CL:0000047,3.02e-10,33;CL:0000031,3.02e-10,33;CL:0000404,3.02e-10,33;CL:0000393,1.67e-07,39;CL:0000211,1.67e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.25e-19!71;UBERON:0003075!1.25e-19!71;UBERON:0007284!1.25e-19!71;UBERON:0001049!1.35e-19!52;UBERON:0005068!1.35e-19!52;UBERON:0006241!1.35e-19!52;UBERON:0007135!1.35e-19!52;UBERON:0002020!6.55e-19!34;UBERON:0000955!2.32e-18!50;UBERON:0006238!2.32e-18!50;UBERON:0002616!7.85e-18!49;UBERON:0000033!3.96e-17!63;UBERON:0001017!2.06e-16!73;UBERON:0005743!2.06e-16!73;UBERON:0002791!6.85e-16!29;UBERON:0003528!6.85e-16!29;UBERON:0001893!6.85e-16!29;UBERON:0000073!1.27e-15!75;UBERON:0001016!1.27e-15!75;UBERON:0003056!1.36e-15!49;UBERON:0007811!3.76e-15!86;UBERON:0003080!5.58e-15!40;UBERON:0002780!2.49e-14!39;UBERON:0001890!2.49e-14!39;UBERON:0006240!2.49e-14!39;UBERON:0004121!5.41e-13!102;UBERON:0000924!5.41e-13!102;UBERON:0006601!5.41e-13!102;UBERON:0000153!8.24e-12!94;UBERON:0000025!1.09e-11!114;UBERON:0000956!2.77e-11!21;UBERON:0001869!2.77e-11!21;UBERON:0000203!2.77e-11!21;UBERON:0004111!8.41e-10!122;UBERON:0002619!8.08e-09!17;UBERON:0002021!1.13e-08!10;UBERON:0000411!1.13e-08!10;UBERON:0001950!1.13e-08!10;UBERON:0000477!2.89e-08!154;UBERON:0000483!5.71e-07!181
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.07e-26,34;UBERON:0000073,2.53e-26,54;UBERON:0001049,1.43e-24,52;UBERON:0005068,1.43e-24,52;UBERON:0006241,1.43e-24,52;UBERON:0007135,1.43e-24,52;UBERON:0002346,3.24e-23,64;UBERON:0003075,3.24e-23,64;UBERON:0007284,3.24e-23,64;UBERON:0003528,3.28e-22,29;UBERON:0002791,3.28e-22,29;UBERON:0001893,3.28e-22,29;UBERON:0001017,1.01e-20,73;UBERON:0000955,2.10e-20,47;UBERON:0006238,2.10e-20,47;UBERON:0002616,1.05e-19,46;UBERON:0001016,1.09e-19,75;UBERON:0010371,3.29e-18,73;UBERON:0003056,3.31e-18,49;UBERON:0003080,1.34e-17,40;UBERON:0002780,9.76e-17,39;UBERON:0001890,9.76e-17,39;UBERON:0006240,9.76e-17,39;UBERON:0004121,2.21e-16,95;UBERON:0000924,2.21e-16,95;UBERON:0006601,2.21e-16,95;UBERON:0000956,8.35e-16,21;UBERON:0001869,8.35e-16,21;UBERON:0000203,8.35e-16,21;UBERON:0010314,3.16e-14,92;UBERON:0002619,2.27e-12,17;UBERON:0002021,2.17e-11,10;UBERON:0000411,2.17e-11,10;UBERON:0001950,2.17e-11,10;UBERON:0000025,8.58e-08,114;UBERON:0003076,1.36e-07,12;UBERON:0003057,1.36e-07,12;UBERON:0002420,1.51e-07,8;UBERON:0007245,1.51e-07,8;UBERON:0010009,1.51e-07,8;UBERON:0010011,1.51e-07,8;UBERON:0000454,1.51e-07,8
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|short_description=p3@Rbfox1
}}

Latest revision as of 17:06, 25 September 2015

Short description:p3@Rbfox1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rbfox1_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 83bp_to_uc007yce.2_5end
EntrezGene:Rbfox1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Rbfox1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.02
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.34
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.11
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B292.23
cerebellum, neonate N30.CNhs11135.1395-42I2104.72
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A414.53
corpus striatum, adult.CNhs10487.19-21D824.25
corpus striatum, neonate N00.CNhs11226.630-43F15.40
cortex, adult.CNhs10473.12-14D542.93
cortex, neonate N30.CNhs11107.1392-42F255.23
diencephalon, adult.CNhs10482.20-12F212.47
diencephalon, neonate N30.CNhs11201.1388-42B216.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E816.19
hippocampus, neonate N00.CNhs11228.627-43G17.61
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E54.57
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.03
medulla oblongata, neonate N30.CNhs11200.1396-42A38.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.79
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A140.10
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A247.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A348.12
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A454.12
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A552.12
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A646.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A739.63
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A852.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A936.76
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.22e-1823
neuroblast (sensu Vertebrata)2.22e-1823
neuron3.02e-1033
neuronal stem cell3.02e-1033
neuroblast3.02e-1033
electrically signaling cell3.02e-1033
electrically responsive cell1.67e-0739
electrically active cell1.67e-0739

Uber anatomy
Ontology termp-valuen
gray matter2.07e-2634
regional part of nervous system2.53e-2654
neural tube1.43e-2452
neural rod1.43e-2452
future spinal cord1.43e-2452
neural keel1.43e-2452
neurectoderm3.24e-2364
neural plate3.24e-2364
presumptive neural plate3.24e-2364
brain grey matter3.28e-2229
regional part of telencephalon3.28e-2229
telencephalon3.28e-2229
central nervous system1.01e-2073
brain2.10e-2047
future brain2.10e-2047
regional part of brain1.05e-1946
nervous system1.09e-1975
ecto-epithelium3.29e-1873
pre-chordal neural plate3.31e-1849
anterior neural tube1.34e-1740
regional part of forebrain9.76e-1739
forebrain9.76e-1739
future forebrain9.76e-1739
ectoderm-derived structure2.21e-1695
ectoderm2.21e-1695
presumptive ectoderm2.21e-1695
cerebral cortex8.35e-1621
cerebral hemisphere8.35e-1621
pallium8.35e-1621
structure with developmental contribution from neural crest3.16e-1492
regional part of cerebral cortex2.27e-1217
occipital lobe2.17e-1110
visual cortex2.17e-1110
neocortex2.17e-1110
tube8.58e-08114
posterior neural tube1.36e-0712
chordal neural plate1.36e-0712
basal ganglion1.51e-078
nuclear complex of neuraxis1.51e-078
aggregate regional part of brain1.51e-078
collection of basal ganglia1.51e-078
cerebral subcortex1.51e-078
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