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FFCP PHASE1:Mm9::chr2:12933299..12933313,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=227580
|EntrezGene=227580
|HGNC=
|HGNC=
|MCL_coexpression_id=235
|MCL_coexpression_id=235
|TSSclassifier=NA
|UniProt=Q9ESN4
|UniProt=Q9ESN4
|association_with_transcript=60bp_to_ENSMUST00000061545_5end
|association_with_transcript=60bp_to_ENSMUST00000061545_5end
|cluster_id=chr2:12933299..12933313,-
|description=CAGE_peak_1_at_C1ql3_5end
|description=CAGE_peak_1_at_C1ql3_5end
|id=chr2:12933299..12933313,-
|id=chr2:12933299..12933313,-
|ontology_enrichment_celltype=CL:0000221!1.32e-16!44;CL:0000133!1.32e-16!44;CL:0002319!1.90e-16!43;CL:0000117!5.32e-13!23;CL:0000337!5.32e-13!23;CL:0000540!8.95e-13!33;CL:0000047!8.95e-13!33;CL:0000031!8.95e-13!33;CL:0000404!8.95e-13!33;CL:0000055!7.58e-12!50;CL:0000393!6.15e-09!39;CL:0000211!6.15e-09!39
|ontology_enrichment_celltype=CL:0000221!1.32e-16!44;CL:0000133!1.32e-16!44;CL:0002319!1.90e-16!43;CL:0000117!5.32e-13!23;CL:0000337!5.32e-13!23;CL:0000540!8.95e-13!33;CL:0000047!8.95e-13!33;CL:0000031!8.95e-13!33;CL:0000404!8.95e-13!33;CL:0000055!7.58e-12!50;CL:0000393!6.15e-09!39;CL:0000211!6.15e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,7.30e-18,23;CL:0000337,7.30e-18,23;CL:0002319,7.90e-17,43;CL:0000221,3.31e-16,44;CL:0000133,3.31e-16,44;CL:0000540,2.20e-12,33;CL:0000047,2.20e-12,33;CL:0000031,2.20e-12,33;CL:0000404,2.20e-12,33;CL:0000393,2.43e-09,39;CL:0000211,2.43e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.49e-30!75;UBERON:0001016!3.49e-30!75;UBERON:0001017!2.44e-29!73;UBERON:0005743!2.44e-29!73;UBERON:0004121!7.27e-26!102;UBERON:0000924!7.27e-26!102;UBERON:0006601!7.27e-26!102;UBERON:0002020!1.68e-22!34;UBERON:0001049!6.58e-22!52;UBERON:0005068!6.58e-22!52;UBERON:0006241!6.58e-22!52;UBERON:0007135!6.58e-22!52;UBERON:0000033!8.33e-21!63;UBERON:0000955!1.05e-20!50;UBERON:0006238!1.05e-20!50;UBERON:0002616!5.86e-20!49;UBERON:0002791!4.24e-19!29;UBERON:0003528!4.24e-19!29;UBERON:0001893!4.24e-19!29;UBERON:0002346!4.53e-19!71;UBERON:0003075!4.53e-19!71;UBERON:0007284!4.53e-19!71;UBERON:0003056!1.12e-16!49;UBERON:0003080!1.36e-16!40;UBERON:0002780!3.00e-16!39;UBERON:0001890!3.00e-16!39;UBERON:0006240!3.00e-16!39;UBERON:0000956!5.27e-15!21;UBERON:0001869!5.27e-15!21;UBERON:0000203!5.27e-15!21;UBERON:0002619!1.83e-13!17;UBERON:0000153!1.32e-12!94;UBERON:0007811!3.49e-11!86;UBERON:0002021!2.58e-09!10;UBERON:0000411!2.58e-09!10;UBERON:0001950!2.58e-09!10
|ontology_enrichment_uberon=UBERON:0000073!3.49e-30!75;UBERON:0001016!3.49e-30!75;UBERON:0001017!2.44e-29!73;UBERON:0005743!2.44e-29!73;UBERON:0004121!7.27e-26!102;UBERON:0000924!7.27e-26!102;UBERON:0006601!7.27e-26!102;UBERON:0002020!1.68e-22!34;UBERON:0001049!6.58e-22!52;UBERON:0005068!6.58e-22!52;UBERON:0006241!6.58e-22!52;UBERON:0007135!6.58e-22!52;UBERON:0000033!8.33e-21!63;UBERON:0000955!1.05e-20!50;UBERON:0006238!1.05e-20!50;UBERON:0002616!5.86e-20!49;UBERON:0002791!4.24e-19!29;UBERON:0003528!4.24e-19!29;UBERON:0001893!4.24e-19!29;UBERON:0002346!4.53e-19!71;UBERON:0003075!4.53e-19!71;UBERON:0007284!4.53e-19!71;UBERON:0003056!1.12e-16!49;UBERON:0003080!1.36e-16!40;UBERON:0002780!3.00e-16!39;UBERON:0001890!3.00e-16!39;UBERON:0006240!3.00e-16!39;UBERON:0000956!5.27e-15!21;UBERON:0001869!5.27e-15!21;UBERON:0000203!5.27e-15!21;UBERON:0002619!1.83e-13!17;UBERON:0000153!1.32e-12!94;UBERON:0007811!3.49e-11!86;UBERON:0002021!2.58e-09!10;UBERON:0000411!2.58e-09!10;UBERON:0001950!2.58e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.80e-33,75;UBERON:0001017,1.64e-32,73;UBERON:0002020,1.94e-31,34;UBERON:0000073,7.29e-30,54;UBERON:0001049,8.23e-28,52;UBERON:0005068,8.23e-28,52;UBERON:0006241,8.23e-28,52;UBERON:0007135,8.23e-28,52;UBERON:0003528,1.42e-26,29;UBERON:0002791,1.42e-26,29;UBERON:0001893,1.42e-26,29;UBERON:0004121,4.49e-25,95;UBERON:0000924,4.49e-25,95;UBERON:0006601,4.49e-25,95;UBERON:0000955,2.34e-23,47;UBERON:0006238,2.34e-23,47;UBERON:0002346,2.45e-23,64;UBERON:0003075,2.45e-23,64;UBERON:0007284,2.45e-23,64;UBERON:0002616,2.37e-22,46;UBERON:0003080,4.42e-21,40;UBERON:0000956,1.01e-20,21;UBERON:0001869,1.01e-20,21;UBERON:0000203,1.01e-20,21;UBERON:0002780,1.37e-20,39;UBERON:0001890,1.37e-20,39;UBERON:0006240,1.37e-20,39;UBERON:0010371,1.32e-18,73;UBERON:0003056,1.46e-18,49;UBERON:0002619,1.59e-18,17;UBERON:0002021,1.30e-12,10;UBERON:0000411,1.30e-12,10;UBERON:0001950,1.30e-12,10;UBERON:0010314,8.00e-12,92;UBERON:0001954,2.16e-07,7;UBERON:0003022,2.16e-07,7;UBERON:0002421,2.16e-07,7;UBERON:0000349,2.16e-07,7;UBERON:0002600,2.16e-07,7;UBERON:0003076,3.45e-07,12;UBERON:0003057,3.45e-07,12;UBERON:0002420,5.40e-07,8;UBERON:0007245,5.40e-07,8;UBERON:0010009,5.40e-07,8;UBERON:0010011,5.40e-07,8;UBERON:0000454,5.40e-07,8
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,10.2902381082794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,1.75748946187577,9.72149495371417,1.53985063787899,5.75010257459886,0,0,0,0,0,0,1.82084814773638,4.23192783417626,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,2.69640099466564,6.14749288514487,1.76272340924412,1.21505344498522,1.05162480675691,6.28432165688368,7.28866185140325,3.06226998037385,2.97120960156533,4.5960939330501,2.20231761998777,26.8143409978894,11.0596703944495,2.1101806036831,1.28082701043374,1.04182674111352,2.51264699101243,12.380777420697,27.1980881042722,7.66034322231536,4.8406371471695,2.60959224155421,3.18050011999373,0.377857800533928,0,0,0,0,0,0,3.5111105032938,0,0,0,0.563373679106722,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0,0.173485326766136,0.608930956624282,0.230615497256059,0.150722640552623,0,0,0,0,0,1.94120219936891,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,1.49790639404823,21.5025283324754,2.01046963380583,100.296632750944,84.8975318336697,14.1295870300501,41.2092808192104,0,0.124406970610093,0,1.47309299120532,0,0.229902104433473,0.360124259610698,0.30140963567143,0.816437989815934,1.7935920839879,1.96773621575431,0,0.215567992932842,0.189106080167819,0.351902248327898,0.876782929710299,0.556094498451196,1.0447564995665,0.823128545631774,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,177.905296485252,4.11618449517138,0,0,0,0.232236671860439,0.38660238396628,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,3.69266356971921,2.81308047821288,0,0.757412781613119,0,0,0.430846795465598,0.716906393857656,2.00518806674155,1.41538265394416,0.404810701674894,0.876767573733936,0.395287777946524,19.2792789853084,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0,0.0603129249281559,0.358117032009409,0.328281799490123,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.314578033277133,0,0,0,0.202725215290164,0.410843828659309,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0,0,0,0,0,31.6261031865557,26.6988637174163,31.5092532391668,36.2610214745181,52.7513540223395,59.6761178937863,66.152205022717,73.8526773287722,61.1742252128676,52.2937914869338,0.31136204275253,0.798049746802062,0.512200817262403,2.43106717068294,0.838452650511929,1.2869045591501,2.44471400581777,1.64828045791115,2.24643446714271,1.51618327058278,1.77435509923168,0.943131706930381,2.43467919421694,1.34452820050225,1.66562859971278,1.42888107384922,2.31768651889711,0.964546102318525,1.64834360321323,1.03039244094078,1.71434626192708,3.01708870470874,1.66905332963125,3.19762116591123,3.29382831453657,1.69229215783353,2.19513567447327,2.10455769150274,1.7654534799962,1.68342681497322,0.949080144993393,1.87158516513571,1.22769312950907,1.54936841185966,2.3148793317737,3.2475375131933,0.701794825336225,2.14871054048298,3.06061331310149,1.10295709559758,0.695603506861264
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,10.2902381082794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,1.75748946187577,9.72149495371417,1.53985063787899,5.75010257459886,0,0,0,0,0,0,1.82084814773638,4.23192783417626,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,2.69640099466564,6.14749288514487,1.76272340924412,1.21505344498522,1.05162480675691,6.28432165688368,7.28866185140325,3.06226998037385,2.97120960156533,4.5960939330501,2.20231761998777,26.8143409978894,11.0596703944495,2.1101806036831,1.28082701043374,1.04182674111352,2.51264699101243,12.380777420697,27.1980881042722,7.66034322231536,4.8406371471695,2.60959224155421,3.18050011999373,0.377857800533928,0,0,0,0,0,0,3.5111105032938,0,0,0,0.563373679106722,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0,0.173485326766136,0.608930956624282,0.230615497256059,0.150722640552623,0,0,0,0,0,1.94120219936891,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,1.49790639404823,21.5025283324754,2.01046963380583,100.296632750944,84.8975318336697,14.1295870300501,41.2092808192104,0,0.124406970610093,0,1.47309299120532,0,0.229902104433473,0.360124259610698,0.30140963567143,0.816437989815934,1.7935920839879,1.96773621575431,0,0.215567992932842,0.189106080167819,0.351902248327898,0.876782929710299,0.556094498451196,1.0447564995665,0.823128545631774,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,177.905296485252,4.11618449517138,0,0,0,0.232236671860439,0.38660238396628,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,3.69266356971921,2.81308047821288,0,0.757412781613119,0,0,0.430846795465598,0.716906393857656,2.00518806674155,1.41538265394416,0.404810701674894,0.876767573733936,0.395287777946524,19.2792789853084,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0,0.0603129249281559,0.358117032009409,0.328281799490123,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.314578033277133,0,0,0,0.202725215290164,0.410843828659309,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0,0,0,0,0,31.6261031865557,26.6988637174163,31.5092532391668,36.2610214745181,52.7513540223395,59.6761178937863,66.152205022717,73.8526773287722,61.1742252128676,52.2937914869338,0.31136204275253,0.798049746802062,0.512200817262403,2.43106717068294,0.838452650511929,1.2869045591501,2.44471400581777,1.64828045791115,2.24643446714271,1.51618327058278,1.77435509923168,0.943131706930381,2.43467919421694,1.34452820050225,1.66562859971278,1.42888107384922,2.31768651889711,0.964546102318525,1.64834360321323,1.03039244094078,1.71434626192708,3.01708870470874,1.66905332963125,3.19762116591123,3.29382831453657,1.69229215783353,2.19513567447327,2.10455769150274,1.7654534799962,1.68342681497322,0.949080144993393,1.87158516513571,1.22769312950907,1.54936841185966,2.3148793317737,3.2475375131933,0.701794825336225,2.14871054048298,3.06061331310149,1.10295709559758,0.695603506861264
|short_description=p1@C1ql3
|short_description=p1@C1ql3
}}
}}

Latest revision as of 17:20, 25 September 2015

Short description:p1@C1ql3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_C1ql3_5end
Coexpression cluster:MCL_coexpression_mm9:235
Association with transcript: 60bp_to_ENSMUST00000061545_5end
EntrezGene:C1ql3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@C1ql3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I627.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D93.18
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D821.50
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D5100.30
cortex, neonate N30.CNhs11107.1392-42F284.90
diencephalon, adult.CNhs10482.20-12F214.13
diencephalon, neonate N30.CNhs11201.1388-42B241.21
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8177.91
hippocampus, neonate N00.CNhs11228.627-43G14.12
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I919.28
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A131.63
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A226.70
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A331.51
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D736.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A452.75
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A559.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A666.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A773.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A861.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A952.29
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.30e-1823
neuroblast (sensu Vertebrata)7.30e-1823
neural cell7.90e-1743
ectodermal cell3.31e-1644
neurectodermal cell3.31e-1644
neuron2.20e-1233
neuronal stem cell2.20e-1233
neuroblast2.20e-1233
electrically signaling cell2.20e-1233
electrically responsive cell2.43e-0939
electrically active cell2.43e-0939

Uber anatomy
Ontology termp-valuen
nervous system9.80e-3375
central nervous system1.64e-3273
gray matter1.94e-3134
regional part of nervous system7.29e-3054
neural tube8.23e-2852
neural rod8.23e-2852
future spinal cord8.23e-2852
neural keel8.23e-2852
brain grey matter1.42e-2629
regional part of telencephalon1.42e-2629
telencephalon1.42e-2629
ectoderm-derived structure4.49e-2595
ectoderm4.49e-2595
presumptive ectoderm4.49e-2595
brain2.34e-2347
future brain2.34e-2347
neurectoderm2.45e-2364
neural plate2.45e-2364
presumptive neural plate2.45e-2364
regional part of brain2.37e-2246
anterior neural tube4.42e-2140
cerebral cortex1.01e-2021
cerebral hemisphere1.01e-2021
pallium1.01e-2021
regional part of forebrain1.37e-2039
forebrain1.37e-2039
future forebrain1.37e-2039
ecto-epithelium1.32e-1873
pre-chordal neural plate1.46e-1849
regional part of cerebral cortex1.59e-1817
occipital lobe1.30e-1210
visual cortex1.30e-1210
neocortex1.30e-1210
structure with developmental contribution from neural crest8.00e-1292
Ammon's horn2.16e-077
lobe parts of cerebral cortex2.16e-077
hippocampal formation2.16e-077
limbic system2.16e-077
limbic lobe2.16e-077
posterior neural tube3.45e-0712
chordal neural plate3.45e-0712
basal ganglion5.40e-078
nuclear complex of neuraxis5.40e-078
aggregate regional part of brain5.40e-078
collection of basal ganglia5.40e-078
cerebral subcortex5.40e-078
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