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FFCP PHASE1:Mm9::chr19:40588323..40588370,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:40588323..40588370,-
|DHSsupport=NA
|short_description=p4@Sorbs1
|DPIdataset=NA
|description=CAGE_peak_4_at_Sorbs1_5end
|association_with_transcript=-21bp_to_NM_009166,uc008hkq.1,uc008hkr.1,uc008hks.1,uc008hkt.1_5end
|EntrezGene=20411
|EntrezGene=20411
|HGNC=
|HGNC=
|MCL_coexpression_id=482
|TSSclassifier=NA
|UniProt=Q62417
|UniProt=Q62417
|association_with_transcript=-21bp_to_NM_009166,uc008hkq.1,uc008hkr.1,uc008hks.1,uc008hkt.1_5end
|cluster_id=chr19:40588323..40588370,-
|description=CAGE_peak_4_at_Sorbs1_5end
|id=chr19:40588323..40588370,-
|ontology_enrichment_celltype=CL:0000117!3.80e-13!23;CL:0000337!3.80e-13!23;CL:0000540!9.93e-07!33;CL:0000047!9.93e-07!33;CL:0000031!9.93e-07!33;CL:0000404!9.93e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.90e-20,23;CL:0000337,2.90e-20,23;CL:0000540,7.33e-12,33;CL:0000047,7.33e-12,33;CL:0000031,7.33e-12,33;CL:0000404,7.33e-12,33;CL:0000393,5.62e-09,39;CL:0000211,5.62e-09,39;CL:0002609,1.04e-08,6;CL:0002319,1.55e-07,43;CL:0000221,3.20e-07,44;CL:0000133,3.20e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.31e-21!52;UBERON:0005068!2.31e-21!52;UBERON:0006241!2.31e-21!52;UBERON:0007135!2.31e-21!52;UBERON:0000955!6.62e-21!50;UBERON:0006238!6.62e-21!50;UBERON:0002616!3.29e-20!49;UBERON:0002020!2.76e-19!34;UBERON:0007811!9.49e-18!86;UBERON:0000033!2.29e-17!63;UBERON:0002791!2.45e-17!29;UBERON:0003528!2.45e-17!29;UBERON:0001893!2.45e-17!29;UBERON:0000153!5.93e-17!94;UBERON:0001017!2.09e-16!73;UBERON:0005743!2.09e-16!73;UBERON:0003080!2.11e-16!40;UBERON:0002780!7.41e-16!39;UBERON:0001890!7.41e-16!39;UBERON:0006240!7.41e-16!39;UBERON:0002346!9.91e-16!71;UBERON:0003075!9.91e-16!71;UBERON:0007284!9.91e-16!71;UBERON:0000073!1.40e-15!75;UBERON:0001016!1.40e-15!75;UBERON:0003056!2.41e-15!49;UBERON:0000956!9.36e-13!21;UBERON:0001869!9.36e-13!21;UBERON:0000203!9.36e-13!21;UBERON:0004121!2.02e-10!102;UBERON:0000924!2.02e-10!102;UBERON:0006601!2.02e-10!102;UBERON:0002619!5.38e-10!17;UBERON:0000477!9.55e-08!154;UBERON:0000064!1.05e-07!99;UBERON:0002021!2.99e-07!10;UBERON:0000411!2.99e-07!10;UBERON:0001950!2.99e-07!10;UBERON:0000025!4.78e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.38e-29,34;UBERON:0000073,5.85e-29,54;UBERON:0003528,1.94e-27,29;UBERON:0002791,1.94e-27,29;UBERON:0001893,1.94e-27,29;UBERON:0001049,2.90e-27,52;UBERON:0005068,2.90e-27,52;UBERON:0006241,2.90e-27,52;UBERON:0007135,2.90e-27,52;UBERON:0000955,6.26e-25,47;UBERON:0006238,6.26e-25,47;UBERON:0001017,2.48e-24,73;UBERON:0002616,7.95e-24,46;UBERON:0001016,2.91e-23,75;UBERON:0002346,8.78e-23,64;UBERON:0003075,8.78e-23,64;UBERON:0007284,8.78e-23,64;UBERON:0003080,3.10e-22,40;UBERON:0002780,2.50e-21,39;UBERON:0001890,2.50e-21,39;UBERON:0006240,2.50e-21,39;UBERON:0000956,1.83e-19,21;UBERON:0001869,1.83e-19,21;UBERON:0000203,1.83e-19,21;UBERON:0003056,2.05e-19,49;UBERON:0010371,3.19e-18,73;UBERON:0004121,1.50e-17,95;UBERON:0000924,1.50e-17,95;UBERON:0006601,1.50e-17,95;UBERON:0002619,1.02e-14,17;UBERON:0010314,1.12e-11,92;UBERON:0002021,1.72e-11,10;UBERON:0000411,1.72e-11,10;UBERON:0001950,1.72e-11,10;UBERON:0002420,5.35e-09,8;UBERON:0007245,5.35e-09,8;UBERON:0010009,5.35e-09,8;UBERON:0010011,5.35e-09,8;UBERON:0000454,5.35e-09,8
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0.387369970324729,0.281577444303333,0.468129052643987,0.171217968225505,0.398860794976682,0.342401459862411,0.699363219351979,0.333109761815663,0.404950534779652,0,0.315462165358238,0,0,1.7008658030214,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0.504060259519861,0.221730510655305,0,1.23012957516914,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0.782391344348039,0.65407546914134,0.219686182734472,0.777719596297134,0,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0,0.515672092277442,4.04632921719196,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0.384218305321555,12.9612015385597,11.340498819862,9.46462326081219,1.71390590642282,0.883474163806454,12.2490799214954,12.8432931164437,9.19218786610021,3.30347642998166,2.29837208553338,2.91852413186863,3.16527090552465,2.10421580285542,3.12548022334056,3.07101298901519,2.8138130501584,3.0559649555362,2.06240009831567,2.42031857358475,3.35519002485541,0.075726193333184,0.151143120213571,0.579728977403356,0,0,0,0.649776417447669,0,0.280888840263504,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0.494389935468748,0.289198713839823,0,0.485300549842228,0,0,0,2.63502717310392,1.46612694769419,0,0,0,0,2.99581278809645,15.0975198930147,13.1937069718508,7.30062144807561,4.60287823194595,3.53239675751252,5.19172041816825,1.32391173005411,0.373220911830279,0.252722758433675,0.420883711772948,0.390361328888111,0,0,0.452114453507145,1.56483948048054,0.896796041993948,1.12442069471675,1.29351685369508,0,0.567318240503458,0.351902248327898,0.876782929710299,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0.23674473558521,0.393528463494808,0.308534225774757,0.465067889500816,0,0.583826711835847,0.329119699826961,0.492502392237286,0.56748166682099,0.438599962275997,0.439100230582101,0.402619256281115,6.9395683026162,9.05560588937703,0,0,0,0,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0.754005626400808,0.795825888164603,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0.114248512609729,1.1270773567308,0,0.387904974335251,0.350679099451593,0.379419222745544,0.147610147979602,0,0.616985819609003,0,0.166845105716094,0,0.674586337154561,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0.179397413521912,0,0.369506380333209,0.37898282354097,0.488894929326078,0.169745085775188,0,0,0,0,0.788175720530955,0.221464689648775,0.159454768657487,0.655453258862952,0,0.144649058581512,0,0,0,0,2.72936002979246,3.39913891117389,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,6.42642632843614,0.141940085208269,0.534196811001766,0.488660878060728,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0,0.354680467284547,0.178368817602071,0.987294123612726,0.913394847343798,0.23467170806371,0.42366414172764,0.441056796109924,0.16488625294148,0.161464426695906,0.784068024066026,0.238744688006273,0.164140899745061,0.291480836629851,4.45020724825223,0.170870880797853,0.82554747185289,0.370389054739423,0.376736914009382,0.27338845544205,0.457556346413045,0,0.139951452323658,0,0.954670618015114,0.316335993581135,0.203319467126849,0.324016022465404,0,0.655087691238533,0.269728692769641,0.495920734352016,0.523511883968059,0,0,0,0.149516546043979,0.330916980914195,0,0.387479470433193,0,0.234714477291508,0.2604087696879,0.419437377702843,0.483168241652012,0.576060012515731,2.21207784439725,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0.79472541912506,2.16351809135944,2.51072196196781,2.92802704849628,2.89585865288999,2.72230699869469,2.82627854145282,2.21287235772758,2.10378423926824,0,0.221985953374065,0.0897138566094757,0,0.579568782096571,0,0.549454872801795,0.643105137237198,0,2.25900737046827,3.22227665555024,5.15605962095457,4.98374228796694,4.11049511862385,3.7769694869485,4.72515750162264,5.40385443869065,4.53142408984205,4.65984280576638,0,1.19707462020309,0.853668028770671,2.18796045361465,0.628839487883947,1.2869045591501,1.33348036680969,0.824140228955577,1.92551525755089,0.252697211763798,1.52087579934144,1.88626341386076,1.49826411951812,1.6646539625266,2.01024141344646,0.952587382566147,1.27472758539341,1.54327376370964,1.23625770240992,0.883193520806384,0.342869252385415,1.59728225543404,2.14592570952589,1.59881058295561,2.07040636913727,1.69229215783353,1.46342378298218,1.05227884575137,1.62964936615034,1.68342681497322,1.89816028998679,0.985044823755635,2.45538625901814,2.47898945897546,0.771626443924566,2.74791635731741,1.16965804222704,1.50409737833809,0.765153328275374,0,0.463735671240843
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0.387369970324729,0.281577444303333,0.468129052643987,0.171217968225505,0.398860794976682,0.342401459862411,0.699363219351979,0.333109761815663,0.404950534779652,0,0.315462165358238,0,0,1.7008658030214,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0.504060259519861,0.221730510655305,0,1.23012957516914,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0.782391344348039,0.65407546914134,0.219686182734472,0.777719596297134,0,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0,0.515672092277442,4.04632921719196,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0.384218305321555,12.9612015385597,11.340498819862,9.46462326081219,1.71390590642282,0.883474163806454,12.2490799214954,12.8432931164437,9.19218786610021,3.30347642998166,2.29837208553338,2.91852413186863,3.16527090552465,2.10421580285542,3.12548022334056,3.07101298901519,2.8138130501584,3.0559649555362,2.06240009831567,2.42031857358475,3.35519002485541,0.075726193333184,0.151143120213571,0.579728977403356,0,0,0,0.649776417447669,0,0.280888840263504,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0.494389935468748,0.289198713839823,0,0.485300549842228,0,0,0,2.63502717310392,1.46612694769419,0,0,0,0,2.99581278809645,15.0975198930147,13.1937069718508,7.30062144807561,4.60287823194595,3.53239675751252,5.19172041816825,1.32391173005411,0.373220911830279,0.252722758433675,0.420883711772948,0.390361328888111,0,0,0.452114453507145,1.56483948048054,0.896796041993948,1.12442069471675,1.29351685369508,0,0.567318240503458,0.351902248327898,0.876782929710299,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0.23674473558521,0.393528463494808,0.308534225774757,0.465067889500816,0,0.583826711835847,0.329119699826961,0.492502392237286,0.56748166682099,0.438599962275997,0.439100230582101,0.402619256281115,6.9395683026162,9.05560588937703,0,0,0,0,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0.754005626400808,0.795825888164603,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0.114248512609729,1.1270773567308,0,0.387904974335251,0.350679099451593,0.379419222745544,0.147610147979602,0,0.616985819609003,0,0.166845105716094,0,0.674586337154561,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0.179397413521912,0,0.369506380333209,0.37898282354097,0.488894929326078,0.169745085775188,0,0,0,0,0.788175720530955,0.221464689648775,0.159454768657487,0.655453258862952,0,0.144649058581512,0,0,0,0,2.72936002979246,3.39913891117389,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,6.42642632843614,0.141940085208269,0.534196811001766,0.488660878060728,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0,0.354680467284547,0.178368817602071,0.987294123612726,0.913394847343798,0.23467170806371,0.42366414172764,0.441056796109924,0.16488625294148,0.161464426695906,0.784068024066026,0.238744688006273,0.164140899745061,0.291480836629851,4.45020724825223,0.170870880797853,0.82554747185289,0.370389054739423,0.376736914009382,0.27338845544205,0.457556346413045,0,0.139951452323658,0,0.954670618015114,0.316335993581135,0.203319467126849,0.324016022465404,0,0.655087691238533,0.269728692769641,0.495920734352016,0.523511883968059,0,0,0,0.149516546043979,0.330916980914195,0,0.387479470433193,0,0.234714477291508,0.2604087696879,0.419437377702843,0.483168241652012,0.576060012515731,2.21207784439725,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0.79472541912506,2.16351809135944,2.51072196196781,2.92802704849628,2.89585865288999,2.72230699869469,2.82627854145282,2.21287235772758,2.10378423926824,0,0.221985953374065,0.0897138566094757,0,0.579568782096571,0,0.549454872801795,0.643105137237198,0,2.25900737046827,3.22227665555024,5.15605962095457,4.98374228796694,4.11049511862385,3.7769694869485,4.72515750162264,5.40385443869065,4.53142408984205,4.65984280576638,0,1.19707462020309,0.853668028770671,2.18796045361465,0.628839487883947,1.2869045591501,1.33348036680969,0.824140228955577,1.92551525755089,0.252697211763798,1.52087579934144,1.88626341386076,1.49826411951812,1.6646539625266,2.01024141344646,0.952587382566147,1.27472758539341,1.54327376370964,1.23625770240992,0.883193520806384,0.342869252385415,1.59728225543404,2.14592570952589,1.59881058295561,2.07040636913727,1.69229215783353,1.46342378298218,1.05227884575137,1.62964936615034,1.68342681497322,1.89816028998679,0.985044823755635,2.45538625901814,2.47898945897546,0.771626443924566,2.74791635731741,1.16965804222704,1.50409737833809,0.765153328275374,0,0.463735671240843
|short_description=p4@Sorbs1
}}
}}

Latest revision as of 17:53, 25 September 2015

Short description:p4@Sorbs1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sorbs1_5end
Coexpression cluster:MCL_coexpression_mm9:482
Association with transcript: -21bp_to_NM_009166, uc008hkq.1, uc008hkr.1, uc008hks.1, uc008hkt.1_5end
EntrezGene:Sorbs1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Sorbs1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.96
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.34
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.84
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D815.10
corpus striatum, neonate N00.CNhs11226.630-43F113.19
cortex, adult.CNhs10473.12-14D57.30
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G19.06
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D32.90
thymus, neonate N10.CNhs11194.748-24E42.72
thymus, neonate N20.CNhs11186.820-7A22.83
thymus, neonate N25.CNhs11125.1362-25G72.21
thymus, neonate N30.CNhs11132.1393-42G22.10
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter2.38e-2934
regional part of nervous system5.85e-2954
brain grey matter1.94e-2729
regional part of telencephalon1.94e-2729
telencephalon1.94e-2729
neural tube2.90e-2752
neural rod2.90e-2752
future spinal cord2.90e-2752
neural keel2.90e-2752
brain6.26e-2547
future brain6.26e-2547
central nervous system2.48e-2473
regional part of brain7.95e-2446
nervous system2.91e-2375
neurectoderm8.78e-2364
neural plate8.78e-2364
presumptive neural plate8.78e-2364
anterior neural tube3.10e-2240
regional part of forebrain2.50e-2139
forebrain2.50e-2139
future forebrain2.50e-2139
cerebral cortex1.83e-1921
cerebral hemisphere1.83e-1921
pallium1.83e-1921
pre-chordal neural plate2.05e-1949
ecto-epithelium3.19e-1873
ectoderm-derived structure1.50e-1795
ectoderm1.50e-1795
presumptive ectoderm1.50e-1795
regional part of cerebral cortex1.02e-1417
structure with developmental contribution from neural crest1.12e-1192
occipital lobe1.72e-1110
visual cortex1.72e-1110
neocortex1.72e-1110
basal ganglion5.35e-098
nuclear complex of neuraxis5.35e-098
aggregate regional part of brain5.35e-098
collection of basal ganglia5.35e-098
cerebral subcortex5.35e-098
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