FFCP PHASE1:Mm9::chr8:74249595..74249635,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=74015|HGNC=|MCL_coexpression_id=3233|UniProt=Q8K285,D3Z6N2|association_with_transcript=0bp_to_ENSMUST00000146100,ENSMUST00000153800_5end|description=CAGE_peak_3_at_Fcho1_5end|id=chr8:74249595..74249635,-|ontology_enrichment_celltype=CL:0000117!4.64e-12!23;CL:0000337!4.64e-12!23;CL:0000540!2.37e-09!33;CL:0000047!2.37e-09!33;CL:0000031!2.37e-09!33;CL:0000404!2.37e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.33e-14,23;CL:0000337,2.33e-14,23;CL:0000540,2.09e-10,33;CL:0000047,2.09e-10,33;CL:0000031,2.09e-10,33;CL:0000404,2.09e-10,33;CL:0000393,3.43e-07,39;CL:0000211,3.43e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!3.55e-20!86;UBERON:0001049!3.62e-20!52;UBERON:0005068!3.62e-20!52;UBERON:0006241!3.62e-20!52;UBERON:0007135!3.62e-20!52;UBERON:0001017!6.64e-20!73;UBERON:0005743!6.64e-20!73;UBERON:0000033!9.24e-20!63;UBERON:0000955!1.84e-19!50;UBERON:0006238!1.84e-19!50;UBERON:0002616!9.72e-19!49;UBERON:0000073!2.52e-18!75;UBERON:0001016!2.52e-18!75;UBERON:0003056!5.10e-18!49;UBERON:0002346!8.53e-18!71;UBERON:0003075!8.53e-18!71;UBERON:0007284!8.53e-18!71;UBERON:0002020!3.52e-17!34;UBERON:0000153!7.85e-17!94;UBERON:0003080!2.01e-16!40;UBERON:0002780!8.60e-16!39;UBERON:0001890!8.60e-16!39;UBERON:0006240!8.60e-16!39;UBERON:0002791!3.76e-15!29;UBERON:0003528!3.76e-15!29;UBERON:0001893!3.76e-15!29;UBERON:0004121!3.68e-14!102;UBERON:0000924!3.68e-14!102;UBERON:0006601!3.68e-14!102;UBERON:0000956!1.22e-10!21;UBERON:0001869!1.22e-10!21;UBERON:0000203!1.22e-10!21;UBERON:0002619!1.43e-08!17;UBERON:0002021!2.75e-07!10;UBERON:0000411!2.75e-07!10;UBERON:0001950!2.75e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.79e-25,54;UBERON:0002346,5.73e-25,64;UBERON:0003075,5.73e-25,64;UBERON:0007284,5.73e-25,64;UBERON:0001049,4.35e-24,52;UBERON:0005068,4.35e-24,52;UBERON:0006241,4.35e-24,52;UBERON:0007135,4.35e-24,52;UBERON:0001017,3.89e-23,73;UBERON:0001016,8.22e-22,75;UBERON:0000955,1.15e-21,47;UBERON:0006238,1.15e-21,47;UBERON:0002616,8.50e-21,46;UBERON:0003056,1.85e-20,49;UBERON:0010371,2.27e-20,73;UBERON:0002020,2.96e-20,34;UBERON:0003080,4.91e-19,40;UBERON:0004121,1.89e-18,95;UBERON:0000924,1.89e-18,95;UBERON:0006601,1.89e-18,95;UBERON:0002780,2.85e-18,39;UBERON:0001890,2.85e-18,39;UBERON:0006240,2.85e-18,39;UBERON:0003528,8.88e-18,29;UBERON:0002791,8.88e-18,29;UBERON:0001893,8.88e-18,29;UBERON:0000956,2.72e-12,21;UBERON:0001869,2.72e-12,21;UBERON:0000203,2.72e-12,21;UBERON:0010314,6.65e-11,92;UBERON:0002619,8.75e-10,17;UBERON:0002021,1.52e-08,10;UBERON:0000411,1.52e-08,10;UBERON:0001950,1.52e-08,10;UBERON:0002420,9.38e-07,8;UBERON:0007245,9.38e-07,8;UBERON:0010009,9.38e-07,8;UBERON:0010011,9.38e-07,8;UBERON:0000454,9.38e-07,8|phase1_expression=2.24208385946712,0.348975407639361,0,0,0,0,0.233612640595526,0.516493293766305,0,0,0.171217968225505,0,1.71200729931206,0.34968160967599,0.666219523631325,1.41732687172878,2.09868563438444,3.47008381894061,2.33094537129756,1.69755860719212,0.680346321208558,4.66667470644161,3.6567970479451,0,0.68822784320151,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,0,0.971020706062307,0,0,0.183546752161682,0,1.30815093828268,0.659058548203415,0.194429899074283,0.139986421625363,0,1.17447824240415,0.725362142011344,1.00828139742739,0,0,0,5.46254444320914,6.34789175126439,9.50747105259269,0.677689064138264,0,0.449949858640699,0,2.1314403448383,0.898800331555214,1.92109152660777,5.80661828927475,6.88530285491622,7.78202357000113,3.14216082844184,4.41737081903227,7.10446635446733,7.28425579738596,11.9498442259303,2.20231761998777,7.66124028511126,6.60508093001847,9.62769900430415,7.77644970620482,8.85552729946492,10.3297709630511,6.19038871034848,5.80633341551878,5.00868595305235,7.83044244395066,4.84638559145781,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0.432982082022428,0,0.505524445014783,0.11418387971906,1.03575153458869,0.742210695324124,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0.376999773989026,0,0.144599356919912,1.76922110389975,0.485300549842228,1.54589062922275,4.363877278217,0,6.44117753425404,6.91174132484402,0.510914110417183,3.95389910869537,3.59941638596045,5.20987930999565,9.13722900369418,8.23501085073528,10.6806199295935,11.1247564923057,13.8086346958378,8.72709787150152,11.6813709408785,0.509196819251581,2.36373244159177,1.0108910337347,0.841767423545896,1.04096354370163,2.29902104433473,1.98068342785884,2.86339153887859,3.19771546011241,2.43416068541215,2.71735001223214,3.88055056108524,0.215567992932842,0.567318240503458,0.175951124163949,0.43839146485515,0,0.348252166522167,0.205782136407943,0.995171334092466,1.40442637462647,4.37491442095016,5.11494298912067,0.414251545071004,0,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.700592054203017,0.493679549740441,0.164167464079095,0,0.438599962275997,0,0.402619256281115,8.83217783969334,12.3485534855141,0.330418782983798,0,0.213288250535234,1.39342003116263,0.902072229254653,0.403367049246685,0.444756087689741,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.58489226135736,0,0.864552199498777,0.995706366271836,0.569003702859245,1.02823661348756,1.1270773567308,0.203651327845314,0.193952487167626,0.420814919341911,0.505892296994058,0.147610147979602,0.156998727841375,0.123397163921801,0,0.667380422864376,0.982794975566015,0.674586337154561,1.01430060694251,1.92941727801933,0.763877555344259,1.43848068725405,1.45921704097532,1.37280706594041,0,0.744281895337007,1.24815069245824,0.252578877947112,0,0,0,0.189491411770485,0.325929952884052,1.01847051465113,0.704070744865506,0.335012514883631,0,0,0.472905432318573,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0.491764273019036,0,8.34863067936518,8.55645312123083,0,0.252470927204373,1.26203287766503,0,1.29254038639679,0.477937595905104,0.445597348164788,1.41538265394416,1.61924280669958,0.876767573733936,0.395287777946524,13.4954952897159,0.425820255624806,1.06839362200353,1.14020871547503,0.329940245945071,0,1.45668381692989,0.302323556964751,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,2.7235168460303,0.36012218806262,2.06973894052407,0.428674070063185,2.48276327099183,1.24858172321449,1.97458824722545,1.522324745573,0.23467170806371,0.42366414172764,0.220528398054962,1.15420377059036,0.322928853391811,0.663442174209714,0.596861720015682,0.164140899745061,0,6.86073617438886,0.854354403989263,1.23832120777933,0.925972636848558,1.88368457004691,2.1871076435364,2.74533807847827,3.73952545986482,4.61839792668071,4.69879910935041,0.954670618015114,0.949007980743406,0.813277868507395,0.540026704109006,0,0.655087691238533,0.539457385539283,0.743881101528023,0.785267825952089,0.648074866458964,0,0,1.19613236835183,1.82004339502807,2.33341426012857,1.16243841129958,0.844780627453891,0.821500670520278,0.39061315453185,2.30690557736564,0.483168241652012,0.864090018773596,3.16011120628178,2.22997736819181,3.69759445793378,4.93699127315621,8.95133478337407,6.15912199821921,8.05309511783791,5.75989155980851,6.86571859647404,8.83998957197998,7.86444244067356,4.87289403698762,6.73482891482306,7.12949103307571,0.680191150845634,0.443971906748129,0.179427713218951,0,0.386379188064381,0.375364950902364,0.183151624267265,1.2862102744744,0.501572104035363,9.03602948187307,7.36520378411483,9.73922372846974,8.248952752497,6.16574267793578,10.5755145634558,12.8254275044043,10.8077088773813,7.70342095273148,11.39072685854,0.93408612825759,0.798049746802062,1.87806966329548,2.91728060481953,1.25767897576789,1.83843508450014,1.55572709461131,0.412070114477788,0.962757628775446,1.76888048234658,1.2673964994512,1.69763707247469,1.03005658216871,2.17685518176556,2.06767688240208,2.38146845641537,2.20180219295225,2.50781986602817,2.47251540481984,2.06078488188156,1.37147700954166,1.06485483695602,1.43061713968393,0.872078499793971,1.78807822789128,1.69229215783353,0.914639864363863,2.63069711437843,1.08643291076689,1.68342681497322,0.949080144993393,1.97008964751127,2.45538625901814,2.47898945897546,1.54325288784913,3.2475375131933,1.16965804222704,2.14871054048298,0.956441660344217,0.882365676478062,2.31867835620421|short_description=p3@Fcho1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74015 | |||
|HGNC= | |||
|MCL_coexpression_id=3233 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K285,D3Z6N2 | |||
|association_with_transcript=0bp_to_ENSMUST00000146100,ENSMUST00000153800_5end | |||
|cluster_id=chr8:74249595..74249635,- | |||
|description=CAGE_peak_3_at_Fcho1_5end | |||
|id=chr8:74249595..74249635,- | |||
|ontology_enrichment_celltype=CL:0000117!4.64e-12!23;CL:0000337!4.64e-12!23;CL:0000540!2.37e-09!33;CL:0000047!2.37e-09!33;CL:0000031!2.37e-09!33;CL:0000404!2.37e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.33e-14,23;CL:0000337,2.33e-14,23;CL:0000540,2.09e-10,33;CL:0000047,2.09e-10,33;CL:0000031,2.09e-10,33;CL:0000404,2.09e-10,33;CL:0000393,3.43e-07,39;CL:0000211,3.43e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!3.55e-20!86;UBERON:0001049!3.62e-20!52;UBERON:0005068!3.62e-20!52;UBERON:0006241!3.62e-20!52;UBERON:0007135!3.62e-20!52;UBERON:0001017!6.64e-20!73;UBERON:0005743!6.64e-20!73;UBERON:0000033!9.24e-20!63;UBERON:0000955!1.84e-19!50;UBERON:0006238!1.84e-19!50;UBERON:0002616!9.72e-19!49;UBERON:0000073!2.52e-18!75;UBERON:0001016!2.52e-18!75;UBERON:0003056!5.10e-18!49;UBERON:0002346!8.53e-18!71;UBERON:0003075!8.53e-18!71;UBERON:0007284!8.53e-18!71;UBERON:0002020!3.52e-17!34;UBERON:0000153!7.85e-17!94;UBERON:0003080!2.01e-16!40;UBERON:0002780!8.60e-16!39;UBERON:0001890!8.60e-16!39;UBERON:0006240!8.60e-16!39;UBERON:0002791!3.76e-15!29;UBERON:0003528!3.76e-15!29;UBERON:0001893!3.76e-15!29;UBERON:0004121!3.68e-14!102;UBERON:0000924!3.68e-14!102;UBERON:0006601!3.68e-14!102;UBERON:0000956!1.22e-10!21;UBERON:0001869!1.22e-10!21;UBERON:0000203!1.22e-10!21;UBERON:0002619!1.43e-08!17;UBERON:0002021!2.75e-07!10;UBERON:0000411!2.75e-07!10;UBERON:0001950!2.75e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.79e-25,54;UBERON:0002346,5.73e-25,64;UBERON:0003075,5.73e-25,64;UBERON:0007284,5.73e-25,64;UBERON:0001049,4.35e-24,52;UBERON:0005068,4.35e-24,52;UBERON:0006241,4.35e-24,52;UBERON:0007135,4.35e-24,52;UBERON:0001017,3.89e-23,73;UBERON:0001016,8.22e-22,75;UBERON:0000955,1.15e-21,47;UBERON:0006238,1.15e-21,47;UBERON:0002616,8.50e-21,46;UBERON:0003056,1.85e-20,49;UBERON:0010371,2.27e-20,73;UBERON:0002020,2.96e-20,34;UBERON:0003080,4.91e-19,40;UBERON:0004121,1.89e-18,95;UBERON:0000924,1.89e-18,95;UBERON:0006601,1.89e-18,95;UBERON:0002780,2.85e-18,39;UBERON:0001890,2.85e-18,39;UBERON:0006240,2.85e-18,39;UBERON:0003528,8.88e-18,29;UBERON:0002791,8.88e-18,29;UBERON:0001893,8.88e-18,29;UBERON:0000956,2.72e-12,21;UBERON:0001869,2.72e-12,21;UBERON:0000203,2.72e-12,21;UBERON:0010314,6.65e-11,92;UBERON:0002619,8.75e-10,17;UBERON:0002021,1.52e-08,10;UBERON:0000411,1.52e-08,10;UBERON:0001950,1.52e-08,10;UBERON:0002420,9.38e-07,8;UBERON:0007245,9.38e-07,8;UBERON:0010009,9.38e-07,8;UBERON:0010011,9.38e-07,8;UBERON:0000454,9.38e-07,8 | |||
|phase1_expression=2.24208385946712,0.348975407639361,0,0,0,0,0.233612640595526,0.516493293766305,0,0,0.171217968225505,0,1.71200729931206,0.34968160967599,0.666219523631325,1.41732687172878,2.09868563438444,3.47008381894061,2.33094537129756,1.69755860719212,0.680346321208558,4.66667470644161,3.6567970479451,0,0.68822784320151,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,0,0.971020706062307,0,0,0.183546752161682,0,1.30815093828268,0.659058548203415,0.194429899074283,0.139986421625363,0,1.17447824240415,0.725362142011344,1.00828139742739,0,0,0,5.46254444320914,6.34789175126439,9.50747105259269,0.677689064138264,0,0.449949858640699,0,2.1314403448383,0.898800331555214,1.92109152660777,5.80661828927475,6.88530285491622,7.78202357000113,3.14216082844184,4.41737081903227,7.10446635446733,7.28425579738596,11.9498442259303,2.20231761998777,7.66124028511126,6.60508093001847,9.62769900430415,7.77644970620482,8.85552729946492,10.3297709630511,6.19038871034848,5.80633341551878,5.00868595305235,7.83044244395066,4.84638559145781,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0.432982082022428,0,0.505524445014783,0.11418387971906,1.03575153458869,0.742210695324124,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0.376999773989026,0,0.144599356919912,1.76922110389975,0.485300549842228,1.54589062922275,4.363877278217,0,6.44117753425404,6.91174132484402,0.510914110417183,3.95389910869537,3.59941638596045,5.20987930999565,9.13722900369418,8.23501085073528,10.6806199295935,11.1247564923057,13.8086346958378,8.72709787150152,11.6813709408785,0.509196819251581,2.36373244159177,1.0108910337347,0.841767423545896,1.04096354370163,2.29902104433473,1.98068342785884,2.86339153887859,3.19771546011241,2.43416068541215,2.71735001223214,3.88055056108524,0.215567992932842,0.567318240503458,0.175951124163949,0.43839146485515,0,0.348252166522167,0.205782136407943,0.995171334092466,1.40442637462647,4.37491442095016,5.11494298912067,0.414251545071004,0,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.700592054203017,0.493679549740441,0.164167464079095,0,0.438599962275997,0,0.402619256281115,8.83217783969334,12.3485534855141,0.330418782983798,0,0.213288250535234,1.39342003116263,0.902072229254653,0.403367049246685,0.444756087689741,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.58489226135736,0,0.864552199498777,0.995706366271836,0.569003702859245,1.02823661348756,1.1270773567308,0.203651327845314,0.193952487167626,0.420814919341911,0.505892296994058,0.147610147979602,0.156998727841375,0.123397163921801,0,0.667380422864376,0.982794975566015,0.674586337154561,1.01430060694251,1.92941727801933,0.763877555344259,1.43848068725405,1.45921704097532,1.37280706594041,0,0.744281895337007,1.24815069245824,0.252578877947112,0,0,0,0.189491411770485,0.325929952884052,1.01847051465113,0.704070744865506,0.335012514883631,0,0,0.472905432318573,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0.491764273019036,0,8.34863067936518,8.55645312123083,0,0.252470927204373,1.26203287766503,0,1.29254038639679,0.477937595905104,0.445597348164788,1.41538265394416,1.61924280669958,0.876767573733936,0.395287777946524,13.4954952897159,0.425820255624806,1.06839362200353,1.14020871547503,0.329940245945071,0,1.45668381692989,0.302323556964751,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,2.7235168460303,0.36012218806262,2.06973894052407,0.428674070063185,2.48276327099183,1.24858172321449,1.97458824722545,1.522324745573,0.23467170806371,0.42366414172764,0.220528398054962,1.15420377059036,0.322928853391811,0.663442174209714,0.596861720015682,0.164140899745061,0,6.86073617438886,0.854354403989263,1.23832120777933,0.925972636848558,1.88368457004691,2.1871076435364,2.74533807847827,3.73952545986482,4.61839792668071,4.69879910935041,0.954670618015114,0.949007980743406,0.813277868507395,0.540026704109006,0,0.655087691238533,0.539457385539283,0.743881101528023,0.785267825952089,0.648074866458964,0,0,1.19613236835183,1.82004339502807,2.33341426012857,1.16243841129958,0.844780627453891,0.821500670520278,0.39061315453185,2.30690557736564,0.483168241652012,0.864090018773596,3.16011120628178,2.22997736819181,3.69759445793378,4.93699127315621,8.95133478337407,6.15912199821921,8.05309511783791,5.75989155980851,6.86571859647404,8.83998957197998,7.86444244067356,4.87289403698762,6.73482891482306,7.12949103307571,0.680191150845634,0.443971906748129,0.179427713218951,0,0.386379188064381,0.375364950902364,0.183151624267265,1.2862102744744,0.501572104035363,9.03602948187307,7.36520378411483,9.73922372846974,8.248952752497,6.16574267793578,10.5755145634558,12.8254275044043,10.8077088773813,7.70342095273148,11.39072685854,0.93408612825759,0.798049746802062,1.87806966329548,2.91728060481953,1.25767897576789,1.83843508450014,1.55572709461131,0.412070114477788,0.962757628775446,1.76888048234658,1.2673964994512,1.69763707247469,1.03005658216871,2.17685518176556,2.06767688240208,2.38146845641537,2.20180219295225,2.50781986602817,2.47251540481984,2.06078488188156,1.37147700954166,1.06485483695602,1.43061713968393,0.872078499793971,1.78807822789128,1.69229215783353,0.914639864363863,2.63069711437843,1.08643291076689,1.68342681497322,0.949080144993393,1.97008964751127,2.45538625901814,2.47898945897546,1.54325288784913,3.2475375131933,1.16965804222704,2.14871054048298,0.956441660344217,0.882365676478062,2.31867835620421 | |||
|short_description=p3@Fcho1 | |||
}} |
Latest revision as of 18:38, 25 September 2015
Short description: | p3@Fcho1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fcho1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3233 |
Association with transcript: | 0bp_to_ENSMUST00000146100, ENSMUST00000153800_5end |
EntrezGene: | Fcho1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.33e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.33e-14 | 23 |
neuron | 2.09e-10 | 33 |
neuronal stem cell | 2.09e-10 | 33 |
neuroblast | 2.09e-10 | 33 |
electrically signaling cell | 2.09e-10 | 33 |
electrically responsive cell | 3.43e-07 | 39 |
electrically active cell | 3.43e-07 | 39 |