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FFCP PHASE1:Mm9::chr5:22251835..22251901,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=269629
|EntrezGene=269629
|HGNC=
|HGNC=
|MCL_coexpression_id=428
|TSSclassifier=NA
|UniProt=D3Z3S3,E9QN56,Q9CTN8
|UniProt=D3Z3S3,E9QN56,Q9CTN8
|association_with_transcript=-109bp_to_ENSMUST00000073678,ENSMUST00000115141,NM_001081231,NM_029990,uc008wpv.2,uc012dst.1_5end
|association_with_transcript=-109bp_to_ENSMUST00000073678,ENSMUST00000115141,NM_001081231,NM_029990,uc008wpv.2,uc012dst.1_5end
|cluster_id=chr5:22251835..22251901,+
|description=CAGE_peak_3_at_Lhfpl3_5end
|description=CAGE_peak_3_at_Lhfpl3_5end
|id=chr5:22251835..22251901,+
|id=chr5:22251835..22251901,+
|ontology_enrichment_celltype=CL:0000540!1.09e-14!33;CL:0000047!1.09e-14!33;CL:0000031!1.09e-14!33;CL:0000404!1.09e-14!33;CL:0000221!3.55e-13!44;CL:0000133!3.55e-13!44;CL:0002319!6.32e-13!43;CL:0000117!1.95e-12!23;CL:0000337!1.95e-12!23;CL:0000393!7.10e-11!39;CL:0000211!7.10e-11!39;CL:0000055!1.63e-09!50
|ontology_enrichment_celltype=CL:0000540!1.09e-14!33;CL:0000047!1.09e-14!33;CL:0000031!1.09e-14!33;CL:0000404!1.09e-14!33;CL:0000221!3.55e-13!44;CL:0000133!3.55e-13!44;CL:0002319!6.32e-13!43;CL:0000117!1.95e-12!23;CL:0000337!1.95e-12!23;CL:0000393!7.10e-11!39;CL:0000211!7.10e-11!39;CL:0000055!1.63e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.97e-16,23;CL:0000337,1.97e-16,23;CL:0000540,1.77e-15,33;CL:0000047,1.77e-15,33;CL:0000031,1.77e-15,33;CL:0000404,1.77e-15,33;CL:0002319,8.02e-13,43;CL:0000221,2.34e-12,44;CL:0000133,2.34e-12,44;CL:0000393,5.28e-12,39;CL:0000211,5.28e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.44e-32!102;UBERON:0000924!1.44e-32!102;UBERON:0006601!1.44e-32!102;UBERON:0001017!1.75e-31!73;UBERON:0005743!1.75e-31!73;UBERON:0000073!2.49e-31!75;UBERON:0001016!2.49e-31!75;UBERON:0002346!1.37e-28!71;UBERON:0003075!1.37e-28!71;UBERON:0007284!1.37e-28!71;UBERON:0000033!1.83e-23!63;UBERON:0001049!2.13e-22!52;UBERON:0005068!2.13e-22!52;UBERON:0006241!2.13e-22!52;UBERON:0007135!2.13e-22!52;UBERON:0000955!9.40e-21!50;UBERON:0006238!9.40e-21!50;UBERON:0003056!1.65e-20!49;UBERON:0002616!6.19e-20!49;UBERON:0002020!7.31e-17!34;UBERON:0003080!1.36e-16!40;UBERON:0002780!7.39e-16!39;UBERON:0001890!7.39e-16!39;UBERON:0006240!7.39e-16!39;UBERON:0002791!4.98e-13!29;UBERON:0003528!4.98e-13!29;UBERON:0001893!4.98e-13!29;UBERON:0000153!7.51e-13!94;UBERON:0007811!3.81e-12!86;UBERON:0000956!2.09e-08!21;UBERON:0001869!2.09e-08!21;UBERON:0000203!2.09e-08!21;UBERON:0002021!1.46e-07!10;UBERON:0000411!1.46e-07!10;UBERON:0001950!1.46e-07!10;UBERON:0002619!2.38e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.17e-39,73;UBERON:0001016,3.61e-38,75;UBERON:0004121,2.55e-35,95;UBERON:0000924,2.55e-35,95;UBERON:0006601,2.55e-35,95;UBERON:0002346,1.24e-33,64;UBERON:0003075,1.24e-33,64;UBERON:0007284,1.24e-33,64;UBERON:0000073,1.93e-33,54;UBERON:0001049,6.50e-31,52;UBERON:0005068,6.50e-31,52;UBERON:0006241,6.50e-31,52;UBERON:0007135,6.50e-31,52;UBERON:0010371,1.07e-27,73;UBERON:0000955,1.29e-24,47;UBERON:0006238,1.29e-24,47;UBERON:0003056,8.74e-24,49;UBERON:0002020,1.79e-23,34;UBERON:0002616,2.29e-23,46;UBERON:0003080,1.20e-20,40;UBERON:0010314,3.67e-20,92;UBERON:0002780,1.64e-19,39;UBERON:0001890,1.64e-19,39;UBERON:0006240,1.64e-19,39;UBERON:0003528,2.59e-17,29;UBERON:0002791,2.59e-17,29;UBERON:0001893,2.59e-17,29;UBERON:0002021,1.23e-11,10;UBERON:0000411,1.23e-11,10;UBERON:0001950,1.23e-11,10;UBERON:0002619,2.33e-11,17;UBERON:0003076,7.88e-11,12;UBERON:0003057,7.88e-11,12;UBERON:0000956,5.62e-10,21;UBERON:0001869,5.62e-10,21;UBERON:0000203,5.62e-10,21;UBERON:0002240,2.57e-09,6;UBERON:0005174,2.57e-09,6;UBERON:0001137,2.57e-09,6;UBERON:0002420,3.06e-09,8;UBERON:0007245,3.06e-09,8;UBERON:0010009,3.06e-09,8;UBERON:0010011,3.06e-09,8;UBERON:0000454,3.06e-09,8;UBERON:0001948,5.49e-08,5;UBERON:0002315,5.49e-08,5;UBERON:0000025,1.15e-07,114
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0,0,0,2.21112554392781,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,2.22548106945558,3.70293685490423,2.53532561402472,0,0,0,0,0,8.68840320503374,8.06858441175265,0.414758449233911,0.810035629990144,0.420649922702764,18.852964970651,25.1790136684839,1.34739879136449,1.82106394934649,0,8.8092704799511,12.7687338085188,14.1318010595744,1.97829431595291,2.19570344645783,1.04182674111352,12.5632349550621,10.6924895906019,12.6822545654752,17.3830865429464,18.7930618654816,4.65998614563251,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.68510327831436,0,2.52351636410202,0.693941307064543,0.608930956624282,0,0.753613202763113,0.470354828542819,0.251333182659351,0,0,0,0,0,0,0,2.34224637609238,5.65506108396329,0,0,0,0,11.9832511523858,8.6925114535539,4.52355667606312,5.9100268865374,7.67146371990992,9.76603809429932,11.5191296778108,0.305518091550949,0,0,2.73574412652416,0.260240885925407,0.689706313300419,1.62055916824814,0.753524089178575,3.33378845841506,4.09963904911519,2.24884138943349,7.24369438069244,0.431135985865684,0.378212160335639,0.879755620819744,0.43839146485515,0,1.39300866608867,0.61734640922383,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,4.41608891984667,2.46971069710283,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.210407459670956,0.316182685621286,0.147610147979602,0.31399745568275,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,12.0412942490844,13.4793439581034,0,0,0.631016438832513,0.780877488593277,1.93881057959519,4.30143836314594,11.3627323782021,12.4553673547086,0,0.584511715822624,0.790575555893047,16.708708453934,0,0.178065603667255,1.30309567482861,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,5.7874732978144,0.540183282093931,0,0.428674070063185,0.354680467284547,1.42695054081656,1.64549020602121,1.522324745573,0,0,0,0,0.484393280087717,0.180938774784468,0.119372344003136,0,0.582961673259701,14.4631735568198,0,0.412773735926445,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,7.90652579663893,5.52390283808612,8.02053718815155,4.98374228796694,6.16574267793578,6.0431511791176,6.75022500231806,4.95353323546643,5.89085131679466,3.10656187051092,0.103787347584177,0.399024873401031,0.170733605754134,0.972426868273176,0.838452650511929,0.551530525350042,0.666740183404846,1.03017528619447,0,1.26348605881899,0.760437899670719,1.69763707247469,1.40462261204824,0.960377286073039,0.976402972245426,1.42888107384922,1.15884325944855,0.77163688185482,0.412085900803307,1.91358596174717,0,0.887379030796687,0.953744759789284,0.726732083161643,0.376437521661322,0.761531471025089,1.82927972872773,0.263069711437843,0.950628796921032,1.12228454331548,1.66089025373844,0.788035859004508,1.63692417267876,0.929621047115796,0.192906610981141,0.999242311751784,1.16965804222704,1.07435527024149,0.382576664137687,0.661774257358546,1.39120701372253
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0,0,0,2.21112554392781,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,2.22548106945558,3.70293685490423,2.53532561402472,0,0,0,0,0,8.68840320503374,8.06858441175265,0.414758449233911,0.810035629990144,0.420649922702764,18.852964970651,25.1790136684839,1.34739879136449,1.82106394934649,0,8.8092704799511,12.7687338085188,14.1318010595744,1.97829431595291,2.19570344645783,1.04182674111352,12.5632349550621,10.6924895906019,12.6822545654752,17.3830865429464,18.7930618654816,4.65998614563251,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.68510327831436,0,2.52351636410202,0.693941307064543,0.608930956624282,0,0.753613202763113,0.470354828542819,0.251333182659351,0,0,0,0,0,0,0,2.34224637609238,5.65506108396329,0,0,0,0,11.9832511523858,8.6925114535539,4.52355667606312,5.9100268865374,7.67146371990992,9.76603809429932,11.5191296778108,0.305518091550949,0,0,2.73574412652416,0.260240885925407,0.689706313300419,1.62055916824814,0.753524089178575,3.33378845841506,4.09963904911519,2.24884138943349,7.24369438069244,0.431135985865684,0.378212160335639,0.879755620819744,0.43839146485515,0,1.39300866608867,0.61734640922383,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,4.41608891984667,2.46971069710283,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.210407459670956,0.316182685621286,0.147610147979602,0.31399745568275,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,12.0412942490844,13.4793439581034,0,0,0.631016438832513,0.780877488593277,1.93881057959519,4.30143836314594,11.3627323782021,12.4553673547086,0,0.584511715822624,0.790575555893047,16.708708453934,0,0.178065603667255,1.30309567482861,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,5.7874732978144,0.540183282093931,0,0.428674070063185,0.354680467284547,1.42695054081656,1.64549020602121,1.522324745573,0,0,0,0,0.484393280087717,0.180938774784468,0.119372344003136,0,0.582961673259701,14.4631735568198,0,0.412773735926445,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,7.90652579663893,5.52390283808612,8.02053718815155,4.98374228796694,6.16574267793578,6.0431511791176,6.75022500231806,4.95353323546643,5.89085131679466,3.10656187051092,0.103787347584177,0.399024873401031,0.170733605754134,0.972426868273176,0.838452650511929,0.551530525350042,0.666740183404846,1.03017528619447,0,1.26348605881899,0.760437899670719,1.69763707247469,1.40462261204824,0.960377286073039,0.976402972245426,1.42888107384922,1.15884325944855,0.77163688185482,0.412085900803307,1.91358596174717,0,0.887379030796687,0.953744759789284,0.726732083161643,0.376437521661322,0.761531471025089,1.82927972872773,0.263069711437843,0.950628796921032,1.12228454331548,1.66089025373844,0.788035859004508,1.63692417267876,0.929621047115796,0.192906610981141,0.999242311751784,1.16965804222704,1.07435527024149,0.382576664137687,0.661774257358546,1.39120701372253
|short_description=p3@Lhfpl3
|short_description=p3@Lhfpl3
}}
}}

Latest revision as of 20:08, 25 September 2015

Short description:p3@Lhfpl3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Lhfpl3_5end
Coexpression cluster:MCL_coexpression_mm9:428
Association with transcript: -109bp_to_ENSMUST00000073678, ENSMUST00000115141, NM_001081231, NM_029990, uc008wpv.2, uc012dst.1_5end
EntrezGene:Lhfpl3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Lhfpl3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C88.69
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D525.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.38
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.79
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.98
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F14.52
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F29.77
diencephalon, neonate N30.CNhs11201.1388-42B211.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C63.33
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C212.04
medulla oblongata, neonate N30.CNhs11200.1396-42A313.48
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I916.71
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C914.46
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.97e-1623
neuroblast (sensu Vertebrata)1.97e-1623
neuron1.77e-1533
neuronal stem cell1.77e-1533
neuroblast1.77e-1533
electrically signaling cell1.77e-1533
neural cell8.02e-1343
ectodermal cell2.34e-1244
neurectodermal cell2.34e-1244
electrically responsive cell5.28e-1239
electrically active cell5.28e-1239

Uber anatomy
Ontology termp-valuen
central nervous system1.17e-3973
nervous system3.61e-3875
ectoderm-derived structure2.55e-3595
ectoderm2.55e-3595
presumptive ectoderm2.55e-3595
neurectoderm1.24e-3364
neural plate1.24e-3364
presumptive neural plate1.24e-3364
regional part of nervous system1.93e-3354
neural tube6.50e-3152
neural rod6.50e-3152
future spinal cord6.50e-3152
neural keel6.50e-3152
ecto-epithelium1.07e-2773
brain1.29e-2447
future brain1.29e-2447
pre-chordal neural plate8.74e-2449
gray matter1.79e-2334
regional part of brain2.29e-2346
anterior neural tube1.20e-2040
structure with developmental contribution from neural crest3.67e-2092
regional part of forebrain1.64e-1939
forebrain1.64e-1939
future forebrain1.64e-1939
brain grey matter2.59e-1729
regional part of telencephalon2.59e-1729
telencephalon2.59e-1729
occipital lobe1.23e-1110
visual cortex1.23e-1110
neocortex1.23e-1110
regional part of cerebral cortex2.33e-1117
posterior neural tube7.88e-1112
chordal neural plate7.88e-1112
cerebral cortex5.62e-1021
cerebral hemisphere5.62e-1021
pallium5.62e-1021
spinal cord2.57e-096
dorsal region element2.57e-096
dorsum2.57e-096
basal ganglion3.06e-098
nuclear complex of neuraxis3.06e-098
aggregate regional part of brain3.06e-098
collection of basal ganglia3.06e-098
cerebral subcortex3.06e-098
regional part of spinal cord5.49e-085
gray matter of spinal cord5.49e-085
tube1.15e-07114
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