FFCP PHASE1:Mm9::chr11:83390639..83390649,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:83390639..83390649,- to FFCP PHASE1:Mm9::chr11:83390639..83390649,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20308 | |EntrezGene=20308 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1997 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000136131_5end | |||
|cluster_id=chr11:83390639..83390649,- | |||
|description=CAGE_peak_2_at_Ccl9_5end | |||
|id=chr11:83390639..83390649,- | |||
|ontology_enrichment_celltype=CL:0000355!2.52e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.20e-15,9;CL:0000557,3.45e-11,7;CL:0000034,5.77e-11,97;CL:0000049,1.11e-09,19;CL:0000192,3.31e-09,3;CL:0000359,3.31e-09,3;CL:0002539,3.31e-09,3;CL:0000514,3.31e-09,3;CL:0000723,3.81e-08,91;CL:0000048,3.81e-08,91;CL:0000680,1.08e-07,6;CL:0000187,1.08e-07,6;CL:0000056,1.08e-07,6;CL:0002476,1.54e-07,2;CL:0002320,2.52e-07,46;CL:0000134,2.52e-07,46;CL:0000473,4.40e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.46e-10,3;DOID:4045,3.46e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!2.39e-10!32;UBERON:0001134!2.52e-08!9;UBERON:0002036!2.52e-08!9;UBERON:0002385!2.52e-08!9;UBERON:0000486!2.52e-08!9;UBERON:0001015!2.52e-08!9;UBERON:0004290!2.52e-08!9;UBERON:0003082!2.52e-08!9;UBERON:0000383!2.83e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.20e-15,9;UBERON:0002036,2.20e-15,9;UBERON:0002385,2.20e-15,9;UBERON:0000486,2.20e-15,9;UBERON:0007503,2.20e-15,9;UBERON:0001015,2.20e-15,9;UBERON:0002329,2.20e-15,9;UBERON:0003082,2.20e-15,9;UBERON:0003059,2.20e-15,9;UBERON:0007282,2.20e-15,9;UBERON:0004290,2.20e-15,9;UBERON:0009618,2.20e-15,9;UBERON:0000383,9.36e-14,10;UBERON:0002204,1.93e-13,32;UBERON:0007524,2.01e-12,11;UBERON:0003077,2.01e-12,11;UBERON:0007285,2.01e-12,11;UBERON:0001135,3.31e-09,3;UBERON:0004237,3.31e-09,3;UBERON:0004695,3.31e-09,3;UBERON:0002111,3.31e-09,3;UBERON:0004178,3.31e-09,3;UBERON:0002384,2.52e-07,46;UBERON:0000947,5.18e-07,4;UBERON:0001637,5.18e-07,4;UBERON:0004573,5.18e-07,4;UBERON:0003509,5.18e-07,4;UBERON:0004571,5.18e-07,4;UBERON:0010191,5.18e-07,4;UBERON:0004572,5.18e-07,4 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0.84877930359606,0,0.397163804803541,1.56719873483361,0.159992422793407,0.68822784320151,1.14846392823004,0,1.07735616342945,0,0,0.886922042621219,0,0,0,0,0,0,3.76678467663217,6.2506827561904,2.61761871986899,5.88231488031014,3.41522742479223,1.94204141212461,1.88845226963366,1.92616169317078,1.10128051297009,0,0,0,0,0,0,0,0,0,1.02903774414379,0,0.515672092277442,0,0,0,0,0,1.3498495759221,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,1.53387290320252,0.519572009205738,1.06001872353102,0,0,2.54805239706646,0,0,0,0,0,1.03575153458869,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0,8.50687383992034,2.99951365496704,7.62421362438388,0,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,2.1066395619397,2.57347907114715,3.9782889915383,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.289298117163023,7.53956419696361,3.80733978673097,0,0.827810238914197,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0,0,0.412773735926445,0.370389054739423,0,0.136694227721025,0,7.30907248973578,8.25713568709582,6.21899882119907,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.375364950902364,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0.697950815278722,0.454999239389536,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0.84877930359606,0,0.397163804803541,1.56719873483361,0.159992422793407,0.68822784320151,1.14846392823004,0,1.07735616342945,0,0,0.886922042621219,0,0,0,0,0,0,3.76678467663217,6.2506827561904,2.61761871986899,5.88231488031014,3.41522742479223,1.94204141212461,1.88845226963366,1.92616169317078,1.10128051297009,0,0,0,0,0,0,0,0,0,1.02903774414379,0,0.515672092277442,0,0,0,0,0,1.3498495759221,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,1.53387290320252,0.519572009205738,1.06001872353102,0,0,2.54805239706646,0,0,0,0,0,1.03575153458869,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0,8.50687383992034,2.99951365496704,7.62421362438388,0,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,2.1066395619397,2.57347907114715,3.9782889915383,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.289298117163023,7.53956419696361,3.80733978673097,0,0.827810238914197,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0,0,0.412773735926445,0.370389054739423,0,0.136694227721025,0,7.30907248973578,8.25713568709582,6.21899882119907,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.375364950902364,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p2@Ccl9 | |||
}} | }} |
Latest revision as of 20:16, 25 September 2015
Short description: | p2@Ccl9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ccl9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1997 |
Association with transcript: | 0bp_to_ENSMUST00000136131_5end |
EntrezGene: | Ccl9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.20e-15 | 9 |
granulocyte monocyte progenitor cell | 3.45e-11 | 7 |
stem cell | 5.77e-11 | 97 |
common myeloid progenitor | 1.11e-09 | 19 |
smooth muscle cell | 3.31e-09 | 3 |
vascular associated smooth muscle cell | 3.31e-09 | 3 |
aortic smooth muscle cell | 3.31e-09 | 3 |
smooth muscle myoblast | 3.31e-09 | 3 |
somatic stem cell | 3.81e-08 | 91 |
multi fate stem cell | 3.81e-08 | 91 |
muscle precursor cell | 1.08e-07 | 6 |
muscle cell | 1.08e-07 | 6 |
myoblast | 1.08e-07 | 6 |
bone marrow macrophage | 1.54e-07 | 2 |
connective tissue cell | 2.52e-07 | 46 |
mesenchymal cell | 2.52e-07 | 46 |
defensive cell | 4.40e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.20e-15 | 9 |
striated muscle tissue | 2.20e-15 | 9 |
muscle tissue | 2.20e-15 | 9 |
multilaminar epithelium | 2.20e-15 | 9 |
epithelial vesicle | 2.20e-15 | 9 |
musculature | 2.20e-15 | 9 |
somite | 2.20e-15 | 9 |
myotome | 2.20e-15 | 9 |
presomitic mesoderm | 2.20e-15 | 9 |
presumptive segmental plate | 2.20e-15 | 9 |
dermomyotome | 2.20e-15 | 9 |
trunk paraxial mesoderm | 2.20e-15 | 9 |
musculature of body | 9.36e-14 | 10 |
musculoskeletal system | 1.93e-13 | 32 |
dense mesenchyme tissue | 2.01e-12 | 11 |
paraxial mesoderm | 2.01e-12 | 11 |
presumptive paraxial mesoderm | 2.01e-12 | 11 |
smooth muscle tissue | 3.31e-09 | 3 |
blood vessel smooth muscle | 3.31e-09 | 3 |
arterial system smooth muscle | 3.31e-09 | 3 |
artery smooth muscle tissue | 3.31e-09 | 3 |
aorta smooth muscle tissue | 3.31e-09 | 3 |
connective tissue | 2.52e-07 | 46 |
aorta | 5.18e-07 | 4 |
artery | 5.18e-07 | 4 |
systemic artery | 5.18e-07 | 4 |
arterial blood vessel | 5.18e-07 | 4 |
systemic arterial system | 5.18e-07 | 4 |
aortic system | 5.18e-07 | 4 |
arterial system | 5.18e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.46e-10 | 3 |
muscle cancer | 3.46e-10 | 3 |