FFCP PHASE1:Mm9::chr19:4711153..4711258,+: Difference between revisions
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{{FFCP|EntrezGene=20743|HGNC=|MCL_coexpression_id=2|UniProt=Q68FG2|association_with_transcript=0bp_to_ENSMUST00000008991,NM_021287,uc008gan.1_5end|description=CAGE_peak_1_at_Spnb3_5end|id=chr19:4711153..4711258,+|ontology_enrichment_celltype=CL:0000117!7.90e-16!23;CL:0000337!7.90e-16!23;CL:0000540!1.32e-13!33;CL:0000047!1.32e-13!33;CL:0000031!1.32e-13!33;CL:0000404!1.32e-13!33;CL:0002319!2.63e-10!43;CL:0000221!8.51e-10!44;CL:0000133!8.51e-10!44;CL:0000393!1.03e-09!39;CL:0000211!1.03e-09!39;CL:0000055!2.98e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.60e-20,23;CL:0000337,1.60e-20,23;CL:0000540,7.33e-12,33;CL:0000047,7.33e-12,33;CL:0000031,7.33e-12,33;CL:0000404,7.33e-12,33;CL:0000393,6.71e-09,39;CL:0000211,6.71e-09,39;CL:0002319,2.00e-07,43;CL:0000221,4.19e-07,44;CL:0000133,4.19e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.09e-30!71;UBERON:0003075!1.09e-30!71;UBERON:0007284!1.09e-30!71;UBERON:0000073!4.35e-29!75;UBERON:0001016!4.35e-29!75;UBERON:0001017!9.63e-29!73;UBERON:0005743!9.63e-29!73;UBERON:0000033!1.01e-27!63;UBERON:0004121!1.19e-27!102;UBERON:0000924!1.19e-27!102;UBERON:0006601!1.19e-27!102;UBERON:0001049!3.91e-27!52;UBERON:0005068!3.91e-27!52;UBERON:0006241!3.91e-27!52;UBERON:0007135!3.91e-27!52;UBERON:0000955!2.86e-26!50;UBERON:0006238!2.86e-26!50;UBERON:0002616!1.98e-25!49;UBERON:0003056!1.08e-23!49;UBERON:0002020!3.28e-22!34;UBERON:0003080!5.69e-21!40;UBERON:0002780!3.10e-20!39;UBERON:0001890!3.10e-20!39;UBERON:0006240!3.10e-20!39;UBERON:0002791!6.43e-19!29;UBERON:0003528!6.43e-19!29;UBERON:0001893!6.43e-19!29;UBERON:0007811!5.07e-15!86;UBERON:0000956!1.20e-13!21;UBERON:0001869!1.20e-13!21;UBERON:0000203!1.20e-13!21;UBERON:0000153!6.80e-12!94;UBERON:0002619!7.14e-11!17;UBERON:0002021!5.21e-10!10;UBERON:0000411!5.21e-10!10;UBERON:0001950!5.21e-10!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.56e-33,54;UBERON:0001049,3.38e-31,52;UBERON:0005068,3.38e-31,52;UBERON:0006241,3.38e-31,52;UBERON:0007135,3.38e-31,52;UBERON:0002020,1.36e-29,34;UBERON:0002346,1.38e-29,64;UBERON:0003075,1.38e-29,64;UBERON:0007284,1.38e-29,64;UBERON:0001017,1.91e-27,73;UBERON:0000955,5.78e-27,47;UBERON:0006238,5.78e-27,47;UBERON:0001016,3.10e-26,75;UBERON:0002616,6.50e-26,46;UBERON:0003528,3.36e-25,29;UBERON:0002791,3.36e-25,29;UBERON:0001893,3.36e-25,29;UBERON:0003056,1.79e-24,49;UBERON:0003080,5.77e-24,40;UBERON:0010371,7.96e-24,73;UBERON:0002780,5.14e-23,39;UBERON:0001890,5.14e-23,39;UBERON:0006240,5.14e-23,39;UBERON:0004121,2.07e-22,95;UBERON:0000924,2.07e-22,95;UBERON:0006601,2.07e-22,95;UBERON:0000956,3.63e-18,21;UBERON:0001869,3.63e-18,21;UBERON:0000203,3.63e-18,21;UBERON:0010314,1.63e-15,92;UBERON:0002619,1.82e-14,17;UBERON:0002021,8.72e-13,10;UBERON:0000411,8.72e-13,10;UBERON:0001950,8.72e-13,10;UBERON:0002420,4.21e-08,8;UBERON:0007245,4.21e-08,8;UBERON:0010009,4.21e-08,8;UBERON:0010011,4.21e-08,8;UBERON:0000454,4.21e-08,8;UBERON:0003076,1.45e-07,12;UBERON:0003057,1.45e-07,12|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.3369697392193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,17.3992156339254,46.0222151966669,27.8885817542719,0,0,0,0,0,0.299600110518405,0,34.3212616741061,46.5770487244333,41.4340173862223,29.9933533623994,29.8172530284678,28.0503930202245,28.4661048924162,44.122501757281,89.1938636095048,80.0599609794127,75.8816274285843,23.0801003527839,27.5377807243253,25.5247551572812,34.6186918761712,36.5795696520592,56.3825534296429,38.3017161115768,42.2843891973336,26.0959224155421,0.227178579999552,0.453429360640713,0,0,0,0.539703191637817,0,0,4.63466586434781,0,0,0,0,0,0,0,0,0,0,5.25245846707676,0,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.452167921657868,0.587943535678524,0.125666591329675,0,0,0,0,0,0,0,97.7887862018568,99.6966324432046,0,0,0,0,50.3296548400204,195.352757403554,55.0366062254346,284.376587834564,336.521541846715,73.3491797295247,133.362318241697,0,0.124406970610093,0,2.73574412652416,0.260240885925407,0.459804208866946,0.900310649026746,1.50704817835715,3.19771546011241,5.76511741281824,3.74806898238915,10.8655415710387,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,263.493305550851,87.7776343595296,0,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0,0,0,0,0,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,27.775252067888,28.5996515284976,0,0,0.631016438832513,0.780877488593277,0,0,0,0.566153061577665,0.404810701674894,0.292255857911312,0.395287777946524,130.456454467254,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,2.04263763452273,0.18006109403131,0.129358683782755,0,0.354680467284547,1.24858172321449,0.822745103010605,2.13125464380219,0,0,0,0,0,0,0,0,0,26.8866687915239,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0.387479470433193,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0.538283139656854,0,0.19318959403219,0,0,0,1.00314420807073,603.154967915027,631.566224487847,672.579332777852,604.751348667437,460.375453285872,514.423244122386,421.889062644879,435.010282314597,446.798415258426,383.142630696347,0.103787347584177,1.99512436700516,1.36586884603307,4.37592090722929,4.61148957781561,4.22840069435032,5.33392146723877,5.56294654545014,4.49286893428541,5.30664144703975,8.36481689637791,6.41329560712659,5.43120743325318,6.40251524048693,5.16919220600519,6.19181798667996,6.2577536010222,2.31491064556446,5.76920261124629,5.15196220470391,6.51451579532289,6.03417740941747,6.43777712857767,6.24989591519013,6.30532848782715,6.26148098398406,4.93905526756486,3.15683653725411,6.51859746460137,6.73370725989286,4.38949567059444,4.92522411877817,4.09231043169689,4.49316839439301,4.62975866354739,17.2369298777183,5.84829021113521,4.94203424311086,1.91288332068843,0.882365676478062,0.463735671240843|short_description=p1@Spnb3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20743 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q68FG2 | |||
|association_with_transcript=0bp_to_ENSMUST00000008991,NM_021287,uc008gan.1_5end | |||
|cluster_id=chr19:4711153..4711258,+ | |||
|description=CAGE_peak_1_at_Spnb3_5end | |||
|id=chr19:4711153..4711258,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.90e-16!23;CL:0000337!7.90e-16!23;CL:0000540!1.32e-13!33;CL:0000047!1.32e-13!33;CL:0000031!1.32e-13!33;CL:0000404!1.32e-13!33;CL:0002319!2.63e-10!43;CL:0000221!8.51e-10!44;CL:0000133!8.51e-10!44;CL:0000393!1.03e-09!39;CL:0000211!1.03e-09!39;CL:0000055!2.98e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.60e-20,23;CL:0000337,1.60e-20,23;CL:0000540,7.33e-12,33;CL:0000047,7.33e-12,33;CL:0000031,7.33e-12,33;CL:0000404,7.33e-12,33;CL:0000393,6.71e-09,39;CL:0000211,6.71e-09,39;CL:0002319,2.00e-07,43;CL:0000221,4.19e-07,44;CL:0000133,4.19e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.09e-30!71;UBERON:0003075!1.09e-30!71;UBERON:0007284!1.09e-30!71;UBERON:0000073!4.35e-29!75;UBERON:0001016!4.35e-29!75;UBERON:0001017!9.63e-29!73;UBERON:0005743!9.63e-29!73;UBERON:0000033!1.01e-27!63;UBERON:0004121!1.19e-27!102;UBERON:0000924!1.19e-27!102;UBERON:0006601!1.19e-27!102;UBERON:0001049!3.91e-27!52;UBERON:0005068!3.91e-27!52;UBERON:0006241!3.91e-27!52;UBERON:0007135!3.91e-27!52;UBERON:0000955!2.86e-26!50;UBERON:0006238!2.86e-26!50;UBERON:0002616!1.98e-25!49;UBERON:0003056!1.08e-23!49;UBERON:0002020!3.28e-22!34;UBERON:0003080!5.69e-21!40;UBERON:0002780!3.10e-20!39;UBERON:0001890!3.10e-20!39;UBERON:0006240!3.10e-20!39;UBERON:0002791!6.43e-19!29;UBERON:0003528!6.43e-19!29;UBERON:0001893!6.43e-19!29;UBERON:0007811!5.07e-15!86;UBERON:0000956!1.20e-13!21;UBERON:0001869!1.20e-13!21;UBERON:0000203!1.20e-13!21;UBERON:0000153!6.80e-12!94;UBERON:0002619!7.14e-11!17;UBERON:0002021!5.21e-10!10;UBERON:0000411!5.21e-10!10;UBERON:0001950!5.21e-10!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.56e-33,54;UBERON:0001049,3.38e-31,52;UBERON:0005068,3.38e-31,52;UBERON:0006241,3.38e-31,52;UBERON:0007135,3.38e-31,52;UBERON:0002020,1.36e-29,34;UBERON:0002346,1.38e-29,64;UBERON:0003075,1.38e-29,64;UBERON:0007284,1.38e-29,64;UBERON:0001017,1.91e-27,73;UBERON:0000955,5.78e-27,47;UBERON:0006238,5.78e-27,47;UBERON:0001016,3.10e-26,75;UBERON:0002616,6.50e-26,46;UBERON:0003528,3.36e-25,29;UBERON:0002791,3.36e-25,29;UBERON:0001893,3.36e-25,29;UBERON:0003056,1.79e-24,49;UBERON:0003080,5.77e-24,40;UBERON:0010371,7.96e-24,73;UBERON:0002780,5.14e-23,39;UBERON:0001890,5.14e-23,39;UBERON:0006240,5.14e-23,39;UBERON:0004121,2.07e-22,95;UBERON:0000924,2.07e-22,95;UBERON:0006601,2.07e-22,95;UBERON:0000956,3.63e-18,21;UBERON:0001869,3.63e-18,21;UBERON:0000203,3.63e-18,21;UBERON:0010314,1.63e-15,92;UBERON:0002619,1.82e-14,17;UBERON:0002021,8.72e-13,10;UBERON:0000411,8.72e-13,10;UBERON:0001950,8.72e-13,10;UBERON:0002420,4.21e-08,8;UBERON:0007245,4.21e-08,8;UBERON:0010009,4.21e-08,8;UBERON:0010011,4.21e-08,8;UBERON:0000454,4.21e-08,8;UBERON:0003076,1.45e-07,12;UBERON:0003057,1.45e-07,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.3369697392193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,17.3992156339254,46.0222151966669,27.8885817542719,0,0,0,0,0,0.299600110518405,0,34.3212616741061,46.5770487244333,41.4340173862223,29.9933533623994,29.8172530284678,28.0503930202245,28.4661048924162,44.122501757281,89.1938636095048,80.0599609794127,75.8816274285843,23.0801003527839,27.5377807243253,25.5247551572812,34.6186918761712,36.5795696520592,56.3825534296429,38.3017161115768,42.2843891973336,26.0959224155421,0.227178579999552,0.453429360640713,0,0,0,0.539703191637817,0,0,4.63466586434781,0,0,0,0,0,0,0,0,0,0,5.25245846707676,0,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.452167921657868,0.587943535678524,0.125666591329675,0,0,0,0,0,0,0,97.7887862018568,99.6966324432046,0,0,0,0,50.3296548400204,195.352757403554,55.0366062254346,284.376587834564,336.521541846715,73.3491797295247,133.362318241697,0,0.124406970610093,0,2.73574412652416,0.260240885925407,0.459804208866946,0.900310649026746,1.50704817835715,3.19771546011241,5.76511741281824,3.74806898238915,10.8655415710387,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,263.493305550851,87.7776343595296,0,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0,0,0,0,0,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,27.775252067888,28.5996515284976,0,0,0.631016438832513,0.780877488593277,0,0,0,0.566153061577665,0.404810701674894,0.292255857911312,0.395287777946524,130.456454467254,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,2.04263763452273,0.18006109403131,0.129358683782755,0,0.354680467284547,1.24858172321449,0.822745103010605,2.13125464380219,0,0,0,0,0,0,0,0,0,26.8866687915239,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0.387479470433193,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0.538283139656854,0,0.19318959403219,0,0,0,1.00314420807073,603.154967915027,631.566224487847,672.579332777852,604.751348667437,460.375453285872,514.423244122386,421.889062644879,435.010282314597,446.798415258426,383.142630696347,0.103787347584177,1.99512436700516,1.36586884603307,4.37592090722929,4.61148957781561,4.22840069435032,5.33392146723877,5.56294654545014,4.49286893428541,5.30664144703975,8.36481689637791,6.41329560712659,5.43120743325318,6.40251524048693,5.16919220600519,6.19181798667996,6.2577536010222,2.31491064556446,5.76920261124629,5.15196220470391,6.51451579532289,6.03417740941747,6.43777712857767,6.24989591519013,6.30532848782715,6.26148098398406,4.93905526756486,3.15683653725411,6.51859746460137,6.73370725989286,4.38949567059444,4.92522411877817,4.09231043169689,4.49316839439301,4.62975866354739,17.2369298777183,5.84829021113521,4.94203424311086,1.91288332068843,0.882365676478062,0.463735671240843 | |||
|short_description=p1@Spnb3 | |||
}} |
Latest revision as of 21:42, 25 September 2015
Short description: | p1@Spnb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Spnb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000008991, NM_021287, uc008gan.1_5end |
EntrezGene: | Spnb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.60e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.60e-20 | 23 |
neuron | 7.33e-12 | 33 |
neuronal stem cell | 7.33e-12 | 33 |
neuroblast | 7.33e-12 | 33 |
electrically signaling cell | 7.33e-12 | 33 |
electrically responsive cell | 6.71e-09 | 39 |
electrically active cell | 6.71e-09 | 39 |
neural cell | 2.00e-07 | 43 |
ectodermal cell | 4.19e-07 | 44 |
neurectodermal cell | 4.19e-07 | 44 |