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FFCP PHASE1:Mm9::chr11:94335638..94335661,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:94335638..94335661,-
|DHSsupport=NA
|short_description=p6@Cacna1g
|DPIdataset=NA
|description=CAGE_peak_6_at_Cacna1g_5end
|association_with_transcript=-126bp_to_NM_001112813,NM_001177888,NM_001177890,NM_009783,uc007kyr.2,uc007kys.2,uc011ycv.1,uc011ycw.1_5end
|EntrezGene=12291
|EntrezGene=12291
|HGNC=
|HGNC=
|MCL_coexpression_id=2739
|TSSclassifier=NA
|UniProt=E9PWL1,Q27YN9,Q9WUT2,Q5SUF9,Q6PFV8,Q5SUG1,Q6ZPX4,Q5SUG4
|UniProt=E9PWL1,Q27YN9,Q9WUT2,Q5SUF9,Q6PFV8,Q5SUG1,Q6ZPX4,Q5SUG4
|association_with_transcript=-126bp_to_NM_001112813,NM_001177888,NM_001177890,NM_009783,uc007kyr.2,uc007kys.2,uc011ycv.1,uc011ycw.1_5end
|cluster_id=chr11:94335638..94335661,-
|description=CAGE_peak_6_at_Cacna1g_5end
|id=chr11:94335638..94335661,-
|ontology_enrichment_celltype=CL:0000117!4.40e-11!23;CL:0000337!4.40e-11!23;CL:0000540!9.20e-08!33;CL:0000047!9.20e-08!33;CL:0000031!9.20e-08!33;CL:0000404!9.20e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.15e-14,23;CL:0000337,2.15e-14,23;CL:0000540,1.75e-08,33;CL:0000047,1.75e-08,33;CL:0000031,1.75e-08,33;CL:0000404,1.75e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.39e-19!52;UBERON:0005068!6.39e-19!52;UBERON:0006241!6.39e-19!52;UBERON:0007135!6.39e-19!52;UBERON:0001017!1.04e-18!73;UBERON:0005743!1.04e-18!73;UBERON:0000033!1.91e-18!63;UBERON:0000955!3.40e-18!50;UBERON:0006238!3.40e-18!50;UBERON:0002616!1.48e-17!49;UBERON:0000073!2.61e-17!75;UBERON:0001016!2.61e-17!75;UBERON:0002346!1.73e-16!71;UBERON:0003075!1.73e-16!71;UBERON:0007284!1.73e-16!71;UBERON:0003056!2.88e-15!49;UBERON:0002020!5.35e-15!34;UBERON:0004121!1.18e-14!102;UBERON:0000924!1.18e-14!102;UBERON:0006601!1.18e-14!102;UBERON:0003080!2.21e-13!40;UBERON:0002780!8.56e-13!39;UBERON:0001890!8.56e-13!39;UBERON:0006240!8.56e-13!39;UBERON:0002791!4.39e-12!29;UBERON:0003528!4.39e-12!29;UBERON:0001893!4.39e-12!29;UBERON:0000153!1.32e-11!94;UBERON:0007811!8.59e-10!86;UBERON:0000468!3.00e-08!333;UBERON:0000956!4.99e-08!21;UBERON:0001869!4.99e-08!21;UBERON:0000203!4.99e-08!21;UBERON:0002021!1.09e-07!10;UBERON:0000411!1.09e-07!10;UBERON:0001950!1.09e-07!10;UBERON:0000025!2.23e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.11e-25,54;UBERON:0001049,2.29e-23,52;UBERON:0005068,2.29e-23,52;UBERON:0006241,2.29e-23,52;UBERON:0007135,2.29e-23,52;UBERON:0002346,3.78e-22,64;UBERON:0003075,3.78e-22,64;UBERON:0007284,3.78e-22,64;UBERON:0001017,4.44e-21,73;UBERON:0001016,5.15e-20,75;UBERON:0002020,2.04e-19,34;UBERON:0000955,2.05e-19,47;UBERON:0006238,2.05e-19,47;UBERON:0010371,5.77e-19,73;UBERON:0002616,1.41e-18,46;UBERON:0010314,1.01e-17,92;UBERON:0004121,2.16e-17,95;UBERON:0000924,2.16e-17,95;UBERON:0006601,2.16e-17,95;UBERON:0003056,3.52e-16,49;UBERON:0003080,2.14e-15,40;UBERON:0003528,2.30e-15,29;UBERON:0002791,2.30e-15,29;UBERON:0001893,2.30e-15,29;UBERON:0002780,1.30e-14,39;UBERON:0001890,1.30e-14,39;UBERON:0006240,1.30e-14,39;UBERON:0002021,3.43e-10,10;UBERON:0000411,3.43e-10,10;UBERON:0001950,3.43e-10,10;UBERON:0000956,9.39e-10,21;UBERON:0001869,9.39e-10,21;UBERON:0000203,9.39e-10,21;UBERON:0000025,6.72e-09,114;UBERON:0003076,6.72e-09,12;UBERON:0003057,6.72e-09,12;UBERON:0004111,1.07e-07,122;UBERON:0002619,1.65e-07,17;UBERON:0002420,3.98e-07,8;UBERON:0007245,3.98e-07,8;UBERON:0010009,3.98e-07,8;UBERON:0010011,3.98e-07,8;UBERON:0000454,3.98e-07,8
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0.333109761815663,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.405507724878058,0.367093504323363,2.34717403304412,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,2.53532561402472,0,0,0,0,0,0.299600110518405,0.384218305321555,1.97010263386108,2.29510095163874,1.47227472945967,5.71301968807607,3.53389665522582,1.22490799214954,0.958454710182364,0,13.2139057199266,18.2592893461818,14.5926206593431,5.53922408466814,4.48289453651807,4.68822033501084,3.07101298901519,5.6276261003168,3.20876320331301,7.66034322231536,3.84403538157578,2.98239113320481,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0,1.28326477414318,10.1922095882658,14.2213340630666,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0.647067399789637,0.883366073841574,0,0,6.14839673724249,11.9384622883669,0.255457055208591,0,0,0,5.99162557619291,1.83000241127451,2.1361239859187,6.08385120672968,6.13717097592793,8.93488591606108,6.97637431191358,2.13862664085664,0,0,0.841767423545896,1.69156575851515,0.459804208866946,1.26043490863744,0.753524089178575,1.97305847538851,1.5373646434182,2.15513966487376,1.29351685369508,1.72454394346274,4.9167580843633,2.81521798662318,3.06874025398605,1.39023624612799,1.0447564995665,1.23469281844766,0.796137067273973,0,0,0,0.414251545071004,0,0,0.946978942340841,0.983821158737019,1.07986979021165,1.62773761325285,0.536546802799238,1.28441876603886,3.12663714835613,1.97000956894914,2.51313309592153,1.31579988682799,1.97595103761946,1.20785776884335,1.47202963994889,3.08713837137853,0,0,1.06644125267617,1.39342003116263,0.644337306610467,0.403367049246685,1.33426826306922,0.190225626112559,0.474529061544512,0,0.754005626400808,0.397912944082302,0.19496408711912,0.898819408654221,0,0,1.13800740571849,0.571242563048644,1.1270773567308,0.203651327845314,0.775809948670503,0.98190147846446,0.69560190836683,0,0.31399745568275,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0.568474235311454,0.325929952884052,1.35796068620151,0.234690248288502,0.670025029767263,0.238043640886014,1.17080188714679,0.157635144106191,0.8858587585951,0.956728611944923,0.327726629431476,0,0,0,0,0,0,3.53211297973142,3.16471553798949,0.655739781506702,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.790575555893047,6.10510501201433,0.141940085208269,2.13678724400706,1.95464351224291,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.388076051348264,0.214337035031592,1.41872186913819,1.96205699362278,1.48094118541909,0.304464949114599,0,0,0.220528398054962,0.8244312647074,1.45317984026315,0.844380948994182,0.477489376012546,0.492422699235184,0.291480836629851,2.78137953015765,0,1.857481811669,1.48155621895769,0,0,0,0,0,0,0,0.474503990371703,1.21991680276109,0.432021363287205,1.04544148007234,0.655087691238533,0.269728692769641,0.330613822901344,0.26175594198403,0.388844919875379,0,0,1.64468200648377,0.330916980914195,0.972255941720238,0.645799117388655,0.675824501963113,0.704143431874524,0.651021924219751,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0.19318959403219,0.187682475451182,1.28206136987086,0.428736758158132,0,10.7302850097243,7.36520378411483,9.16632821503035,12.2015759464018,2.74033007908257,9.06472676867641,2.02506750069542,9.45674526770863,7.25027854374727,9.31968561153276,0.62272408550506,2.39414924040619,2.21953687480374,1.21553358534147,0.628839487883947,0.367687016900028,1.55572709461131,0.824140228955577,1.28367683836726,2.27427490587418,0.760437899670719,1.50901073108861,2.06011316433741,1.40855335290712,1.14870937911227,1.90517476513229,1.39061191133827,1.54327376370964,0.412085900803307,1.32479028120958,0.342869252385415,1.4198064492747,1.66905332963125,0.872078499793971,1.03520318456864,1.01537529470012,0.365855945745545,0.789209134313529,1.62964936615034,0.561142271657738,0.949080144993393,2.06859412988683,1.22769312950907,0.929621047115796,2.12197272079256,1.49886346762768,0.935726433781634,1.71896843238639,1.72159498861959,0.220591419119515,0.927471342481686
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0.333109761815663,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.405507724878058,0.367093504323363,2.34717403304412,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,2.53532561402472,0,0,0,0,0,0.299600110518405,0.384218305321555,1.97010263386108,2.29510095163874,1.47227472945967,5.71301968807607,3.53389665522582,1.22490799214954,0.958454710182364,0,13.2139057199266,18.2592893461818,14.5926206593431,5.53922408466814,4.48289453651807,4.68822033501084,3.07101298901519,5.6276261003168,3.20876320331301,7.66034322231536,3.84403538157578,2.98239113320481,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0,1.28326477414318,10.1922095882658,14.2213340630666,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0.647067399789637,0.883366073841574,0,0,6.14839673724249,11.9384622883669,0.255457055208591,0,0,0,5.99162557619291,1.83000241127451,2.1361239859187,6.08385120672968,6.13717097592793,8.93488591606108,6.97637431191358,2.13862664085664,0,0,0.841767423545896,1.69156575851515,0.459804208866946,1.26043490863744,0.753524089178575,1.97305847538851,1.5373646434182,2.15513966487376,1.29351685369508,1.72454394346274,4.9167580843633,2.81521798662318,3.06874025398605,1.39023624612799,1.0447564995665,1.23469281844766,0.796137067273973,0,0,0,0.414251545071004,0,0,0.946978942340841,0.983821158737019,1.07986979021165,1.62773761325285,0.536546802799238,1.28441876603886,3.12663714835613,1.97000956894914,2.51313309592153,1.31579988682799,1.97595103761946,1.20785776884335,1.47202963994889,3.08713837137853,0,0,1.06644125267617,1.39342003116263,0.644337306610467,0.403367049246685,1.33426826306922,0.190225626112559,0.474529061544512,0,0.754005626400808,0.397912944082302,0.19496408711912,0.898819408654221,0,0,1.13800740571849,0.571242563048644,1.1270773567308,0.203651327845314,0.775809948670503,0.98190147846446,0.69560190836683,0,0.31399745568275,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0.568474235311454,0.325929952884052,1.35796068620151,0.234690248288502,0.670025029767263,0.238043640886014,1.17080188714679,0.157635144106191,0.8858587585951,0.956728611944923,0.327726629431476,0,0,0,0,0,0,3.53211297973142,3.16471553798949,0.655739781506702,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.790575555893047,6.10510501201433,0.141940085208269,2.13678724400706,1.95464351224291,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.388076051348264,0.214337035031592,1.41872186913819,1.96205699362278,1.48094118541909,0.304464949114599,0,0,0.220528398054962,0.8244312647074,1.45317984026315,0.844380948994182,0.477489376012546,0.492422699235184,0.291480836629851,2.78137953015765,0,1.857481811669,1.48155621895769,0,0,0,0,0,0,0,0.474503990371703,1.21991680276109,0.432021363287205,1.04544148007234,0.655087691238533,0.269728692769641,0.330613822901344,0.26175594198403,0.388844919875379,0,0,1.64468200648377,0.330916980914195,0.972255941720238,0.645799117388655,0.675824501963113,0.704143431874524,0.651021924219751,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0.19318959403219,0.187682475451182,1.28206136987086,0.428736758158132,0,10.7302850097243,7.36520378411483,9.16632821503035,12.2015759464018,2.74033007908257,9.06472676867641,2.02506750069542,9.45674526770863,7.25027854374727,9.31968561153276,0.62272408550506,2.39414924040619,2.21953687480374,1.21553358534147,0.628839487883947,0.367687016900028,1.55572709461131,0.824140228955577,1.28367683836726,2.27427490587418,0.760437899670719,1.50901073108861,2.06011316433741,1.40855335290712,1.14870937911227,1.90517476513229,1.39061191133827,1.54327376370964,0.412085900803307,1.32479028120958,0.342869252385415,1.4198064492747,1.66905332963125,0.872078499793971,1.03520318456864,1.01537529470012,0.365855945745545,0.789209134313529,1.62964936615034,0.561142271657738,0.949080144993393,2.06859412988683,1.22769312950907,0.929621047115796,2.12197272079256,1.49886346762768,0.935726433781634,1.71896843238639,1.72159498861959,0.220591419119515,0.927471342481686
|short_description=p6@Cacna1g
}}
}}

Latest revision as of 23:50, 25 September 2015

Short description:p6@Cacna1g
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Cacna1g_5end
Coexpression cluster:MCL_coexpression_mm9:2739
Association with transcript: -126bp_to_NM_001112813, NM_001177888, NM_001177890, NM_009783, uc007kyr.2, uc007kys.2, uc011ycv.1, uc011ycw.1_5end
EntrezGene:Cacna1g
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Cacna1g

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.54
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I211.94
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D56.08
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H24.92
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I23.13
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G12.51
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.15e-1423
neuroblast (sensu Vertebrata)2.15e-1423
neuron1.75e-0833
neuronal stem cell1.75e-0833
neuroblast1.75e-0833
electrically signaling cell1.75e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.11e-2554
neural tube2.29e-2352
neural rod2.29e-2352
future spinal cord2.29e-2352
neural keel2.29e-2352
neurectoderm3.78e-2264
neural plate3.78e-2264
presumptive neural plate3.78e-2264
central nervous system4.44e-2173
nervous system5.15e-2075
gray matter2.04e-1934
brain2.05e-1947
future brain2.05e-1947
ecto-epithelium5.77e-1973
regional part of brain1.41e-1846
structure with developmental contribution from neural crest1.01e-1792
ectoderm-derived structure2.16e-1795
ectoderm2.16e-1795
presumptive ectoderm2.16e-1795
pre-chordal neural plate3.52e-1649
anterior neural tube2.14e-1540
brain grey matter2.30e-1529
regional part of telencephalon2.30e-1529
telencephalon2.30e-1529
regional part of forebrain1.30e-1439
forebrain1.30e-1439
future forebrain1.30e-1439
occipital lobe3.43e-1010
visual cortex3.43e-1010
neocortex3.43e-1010
cerebral cortex9.39e-1021
cerebral hemisphere9.39e-1021
pallium9.39e-1021
tube6.72e-09114
posterior neural tube6.72e-0912
chordal neural plate6.72e-0912
anatomical conduit1.07e-07122
regional part of cerebral cortex1.65e-0717
basal ganglion3.98e-078
nuclear complex of neuraxis3.98e-078
aggregate regional part of brain3.98e-078
collection of basal ganglia3.98e-078
cerebral subcortex3.98e-078
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