FFCP PHASE1:Mm9::chr9:104472084..104472123,+: Difference between revisions
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{{FFCP|EntrezGene=74020|HGNC=|MCL_coexpression_id=93|UniProt=Q9D6C8,Q8BLR2|association_with_transcript=0bp_to_ENSMUST00000077190,NM_028719,uc009rhr.1,uc012gzm.1_5end|description=CAGE_peak_1_at_Cpne4_5end|id=chr9:104472084..104472123,+|ontology_enrichment_celltype=CL:0000117!8.47e-13!23;CL:0000337!8.47e-13!23;CL:0000540!4.17e-07!33;CL:0000047!4.17e-07!33;CL:0000031!4.17e-07!33;CL:0000404!4.17e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.80e-16,23;CL:0000337,6.80e-16,23;CL:0000540,1.25e-09,33;CL:0000047,1.25e-09,33;CL:0000031,1.25e-09,33;CL:0000404,1.25e-09,33;CL:0000393,4.62e-07,39;CL:0000211,4.62e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.98e-20!63;UBERON:0002346!8.33e-20!71;UBERON:0003075!8.33e-20!71;UBERON:0007284!8.33e-20!71;UBERON:0001049!1.17e-19!52;UBERON:0005068!1.17e-19!52;UBERON:0006241!1.17e-19!52;UBERON:0007135!1.17e-19!52;UBERON:0000955!7.49e-19!50;UBERON:0006238!7.49e-19!50;UBERON:0003056!1.02e-18!49;UBERON:0002616!4.63e-18!49;UBERON:0002020!6.95e-18!34;UBERON:0004121!1.27e-17!102;UBERON:0000924!1.27e-17!102;UBERON:0006601!1.27e-17!102;UBERON:0003080!2.60e-17!40;UBERON:0001017!4.83e-17!73;UBERON:0005743!4.83e-17!73;UBERON:0000073!5.33e-17!75;UBERON:0001016!5.33e-17!75;UBERON:0002780!1.38e-16!39;UBERON:0001890!1.38e-16!39;UBERON:0006240!1.38e-16!39;UBERON:0002791!6.97e-15!29;UBERON:0003528!6.97e-15!29;UBERON:0001893!6.97e-15!29;UBERON:0007811!9.31e-11!86;UBERON:0000956!1.68e-10!21;UBERON:0001869!1.68e-10!21;UBERON:0000203!1.68e-10!21;UBERON:0002619!2.25e-09!17;UBERON:0002021!5.60e-09!10;UBERON:0000411!5.60e-09!10;UBERON:0001950!5.60e-09!10;UBERON:0000153!8.04e-09!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.50e-27,54;UBERON:0001049,3.43e-25,52;UBERON:0005068,3.43e-25,52;UBERON:0006241,3.43e-25,52;UBERON:0007135,3.43e-25,52;UBERON:0002346,5.40e-25,64;UBERON:0003075,5.40e-25,64;UBERON:0007284,5.40e-25,64;UBERON:0002020,1.58e-23,34;UBERON:0003056,2.36e-23,49;UBERON:0001017,3.08e-23,73;UBERON:0001016,3.96e-22,75;UBERON:0003080,9.21e-22,40;UBERON:0000955,2.46e-21,47;UBERON:0006238,2.46e-21,47;UBERON:0002780,8.72e-21,39;UBERON:0001890,8.72e-21,39;UBERON:0006240,8.72e-21,39;UBERON:0010371,1.12e-20,73;UBERON:0002616,2.65e-20,46;UBERON:0004121,3.49e-20,95;UBERON:0000924,3.49e-20,95;UBERON:0006601,3.49e-20,95;UBERON:0003528,1.96e-19,29;UBERON:0002791,1.96e-19,29;UBERON:0001893,1.96e-19,29;UBERON:0010314,9.93e-16,92;UBERON:0000956,1.82e-13,21;UBERON:0001869,1.82e-13,21;UBERON:0000203,1.82e-13,21;UBERON:0002619,6.56e-13,17;UBERON:0002021,1.11e-11,10;UBERON:0000411,1.11e-11,10;UBERON:0001950,1.11e-11,10;UBERON:0002420,3.36e-07,8;UBERON:0007245,3.36e-07,8;UBERON:0010009,3.36e-07,8;UBERON:0010011,3.36e-07,8;UBERON:0000454,3.36e-07,8|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0.42438965179803,4.76242424845991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68802551266472,12.6957835025288,11.4089652631112,0,0,0,0,0,0.299600110518405,0,1.97010263386108,1.08004750665353,0.420649922702764,3.99911378165325,7.95126747425809,3.79721477566358,3.83381884072945,4.5960939330501,18.7196997698961,14.1732945274558,19.6616362567992,4.48413378282659,9.69769022185542,1.56274011167028,5.02529398202486,8.4414391504752,9.77908785771585,13.258286346315,8.82704420954438,6.15118171223492,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0.776813650941515,0.29688427812965,1.38788261412909,0.913396434936424,0.922461989024234,2.26083960828934,1.17588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0.766371165625774,0,0,0,29.5087559627501,14.640019290196,11.3088916901578,46.0634448509533,37.5901722275586,19.1165000994795,26.4453258800445,0.611036183101898,0,0,1.05220927943237,0,0,0.720248519221397,6.63101198477146,5.57899293040888,4.99643509110914,3.27956035959051,5.95017752699736,0,0.189106080167819,0,0,0,0,0,1.59227413454795,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,25.6553737248235,18.7286394530298,0,0.264450566663544,1.06644125267617,0.232236671860439,0.257734922644187,0.201683524623343,1.11189021922435,1.14135375667535,0,1.97638745668813,1.00534083520108,1.98956472041151,1.36474860983384,0,0.432276099749388,0.796565093017469,0,0.685491075658373,0,0,0.193952487167626,0,0.126473074248515,0.147610147979602,0.470996183524124,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0,0,0,0.630540576424764,0.44292937929755,0.318909537314974,0,0,0,0,0,0,0,12.0412942490844,11.7211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,243.240236531308,0.141940085208269,1.24645922567079,0.162886959353576,0,0,0.728341908464944,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0.727067458955011,0,0.316036757935816,0,0,1.02131881726136,0,0.129358683782755,3.64372959553707,2.48276327099183,1.42695054081656,2.30368628842969,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0.241251699712623,0.358117032009409,0.164140899745061,0.582961673259701,9.08583979851498,0.341741761595705,5.57244543500701,1.29636169158798,0,0.27338845544205,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.518459893167171,0,0,0,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,1.36038230169127,0,0,0,0,0,0,0,0,32.7556068717899,30.8417908459809,35.5195218332426,37.4639937509239,36.309373547844,40.7912704590438,27.0009000092722,35.5753750547134,38.9702471726416,36.7609821343792,0.415149390336707,0.399024873401031,1.36586884603307,2.43106717068294,1.25767897576789,1.2869045591501,2.889207461421,3.91466608753899,2.88827288632634,1.76888048234658,3.54871019846336,2.26351609663291,2.62196220915671,2.88113185821912,2.52716063404698,0.476293691283074,2.89710814862139,3.27945674788299,1.64834360321323,2.06078488188156,2.40008476669791,2.66213709239006,2.86123427936785,2.0348498328526,2.82328141245992,2.79228206042532,2.74391959309159,2.10455769150274,2.03706170768793,3.36685362994643,2.37270036248348,1.87158516513571,2.45538625901814,1.54936841185966,2.3148793317737,2.99772693525535,1.63752125911786,2.57845264857958,1.53030665655075,0.441182838239031,0.695603506861264|short_description=p1@Cpne4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74020 | |||
|HGNC= | |||
|MCL_coexpression_id=93 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D6C8,Q8BLR2 | |||
|association_with_transcript=0bp_to_ENSMUST00000077190,NM_028719,uc009rhr.1,uc012gzm.1_5end | |||
|cluster_id=chr9:104472084..104472123,+ | |||
|description=CAGE_peak_1_at_Cpne4_5end | |||
|id=chr9:104472084..104472123,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.47e-13!23;CL:0000337!8.47e-13!23;CL:0000540!4.17e-07!33;CL:0000047!4.17e-07!33;CL:0000031!4.17e-07!33;CL:0000404!4.17e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.80e-16,23;CL:0000337,6.80e-16,23;CL:0000540,1.25e-09,33;CL:0000047,1.25e-09,33;CL:0000031,1.25e-09,33;CL:0000404,1.25e-09,33;CL:0000393,4.62e-07,39;CL:0000211,4.62e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.98e-20!63;UBERON:0002346!8.33e-20!71;UBERON:0003075!8.33e-20!71;UBERON:0007284!8.33e-20!71;UBERON:0001049!1.17e-19!52;UBERON:0005068!1.17e-19!52;UBERON:0006241!1.17e-19!52;UBERON:0007135!1.17e-19!52;UBERON:0000955!7.49e-19!50;UBERON:0006238!7.49e-19!50;UBERON:0003056!1.02e-18!49;UBERON:0002616!4.63e-18!49;UBERON:0002020!6.95e-18!34;UBERON:0004121!1.27e-17!102;UBERON:0000924!1.27e-17!102;UBERON:0006601!1.27e-17!102;UBERON:0003080!2.60e-17!40;UBERON:0001017!4.83e-17!73;UBERON:0005743!4.83e-17!73;UBERON:0000073!5.33e-17!75;UBERON:0001016!5.33e-17!75;UBERON:0002780!1.38e-16!39;UBERON:0001890!1.38e-16!39;UBERON:0006240!1.38e-16!39;UBERON:0002791!6.97e-15!29;UBERON:0003528!6.97e-15!29;UBERON:0001893!6.97e-15!29;UBERON:0007811!9.31e-11!86;UBERON:0000956!1.68e-10!21;UBERON:0001869!1.68e-10!21;UBERON:0000203!1.68e-10!21;UBERON:0002619!2.25e-09!17;UBERON:0002021!5.60e-09!10;UBERON:0000411!5.60e-09!10;UBERON:0001950!5.60e-09!10;UBERON:0000153!8.04e-09!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.50e-27,54;UBERON:0001049,3.43e-25,52;UBERON:0005068,3.43e-25,52;UBERON:0006241,3.43e-25,52;UBERON:0007135,3.43e-25,52;UBERON:0002346,5.40e-25,64;UBERON:0003075,5.40e-25,64;UBERON:0007284,5.40e-25,64;UBERON:0002020,1.58e-23,34;UBERON:0003056,2.36e-23,49;UBERON:0001017,3.08e-23,73;UBERON:0001016,3.96e-22,75;UBERON:0003080,9.21e-22,40;UBERON:0000955,2.46e-21,47;UBERON:0006238,2.46e-21,47;UBERON:0002780,8.72e-21,39;UBERON:0001890,8.72e-21,39;UBERON:0006240,8.72e-21,39;UBERON:0010371,1.12e-20,73;UBERON:0002616,2.65e-20,46;UBERON:0004121,3.49e-20,95;UBERON:0000924,3.49e-20,95;UBERON:0006601,3.49e-20,95;UBERON:0003528,1.96e-19,29;UBERON:0002791,1.96e-19,29;UBERON:0001893,1.96e-19,29;UBERON:0010314,9.93e-16,92;UBERON:0000956,1.82e-13,21;UBERON:0001869,1.82e-13,21;UBERON:0000203,1.82e-13,21;UBERON:0002619,6.56e-13,17;UBERON:0002021,1.11e-11,10;UBERON:0000411,1.11e-11,10;UBERON:0001950,1.11e-11,10;UBERON:0002420,3.36e-07,8;UBERON:0007245,3.36e-07,8;UBERON:0010009,3.36e-07,8;UBERON:0010011,3.36e-07,8;UBERON:0000454,3.36e-07,8 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0.42438965179803,4.76242424845991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68802551266472,12.6957835025288,11.4089652631112,0,0,0,0,0,0.299600110518405,0,1.97010263386108,1.08004750665353,0.420649922702764,3.99911378165325,7.95126747425809,3.79721477566358,3.83381884072945,4.5960939330501,18.7196997698961,14.1732945274558,19.6616362567992,4.48413378282659,9.69769022185542,1.56274011167028,5.02529398202486,8.4414391504752,9.77908785771585,13.258286346315,8.82704420954438,6.15118171223492,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0.776813650941515,0.29688427812965,1.38788261412909,0.913396434936424,0.922461989024234,2.26083960828934,1.17588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0.766371165625774,0,0,0,29.5087559627501,14.640019290196,11.3088916901578,46.0634448509533,37.5901722275586,19.1165000994795,26.4453258800445,0.611036183101898,0,0,1.05220927943237,0,0,0.720248519221397,6.63101198477146,5.57899293040888,4.99643509110914,3.27956035959051,5.95017752699736,0,0.189106080167819,0,0,0,0,0,1.59227413454795,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,25.6553737248235,18.7286394530298,0,0.264450566663544,1.06644125267617,0.232236671860439,0.257734922644187,0.201683524623343,1.11189021922435,1.14135375667535,0,1.97638745668813,1.00534083520108,1.98956472041151,1.36474860983384,0,0.432276099749388,0.796565093017469,0,0.685491075658373,0,0,0.193952487167626,0,0.126473074248515,0.147610147979602,0.470996183524124,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0,0,0,0.630540576424764,0.44292937929755,0.318909537314974,0,0,0,0,0,0,0,12.0412942490844,11.7211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,243.240236531308,0.141940085208269,1.24645922567079,0.162886959353576,0,0,0.728341908464944,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0.727067458955011,0,0.316036757935816,0,0,1.02131881726136,0,0.129358683782755,3.64372959553707,2.48276327099183,1.42695054081656,2.30368628842969,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0.241251699712623,0.358117032009409,0.164140899745061,0.582961673259701,9.08583979851498,0.341741761595705,5.57244543500701,1.29636169158798,0,0.27338845544205,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.518459893167171,0,0,0,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,1.36038230169127,0,0,0,0,0,0,0,0,32.7556068717899,30.8417908459809,35.5195218332426,37.4639937509239,36.309373547844,40.7912704590438,27.0009000092722,35.5753750547134,38.9702471726416,36.7609821343792,0.415149390336707,0.399024873401031,1.36586884603307,2.43106717068294,1.25767897576789,1.2869045591501,2.889207461421,3.91466608753899,2.88827288632634,1.76888048234658,3.54871019846336,2.26351609663291,2.62196220915671,2.88113185821912,2.52716063404698,0.476293691283074,2.89710814862139,3.27945674788299,1.64834360321323,2.06078488188156,2.40008476669791,2.66213709239006,2.86123427936785,2.0348498328526,2.82328141245992,2.79228206042532,2.74391959309159,2.10455769150274,2.03706170768793,3.36685362994643,2.37270036248348,1.87158516513571,2.45538625901814,1.54936841185966,2.3148793317737,2.99772693525535,1.63752125911786,2.57845264857958,1.53030665655075,0.441182838239031,0.695603506861264 | |||
|short_description=p1@Cpne4 | |||
}} |
Latest revision as of 02:26, 26 September 2015
Short description: | p1@Cpne4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cpne4_5end |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | 0bp_to_ENSMUST00000077190, NM_028719, uc009rhr.1, uc012gzm.1_5end |
EntrezGene: | Cpne4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.80e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.80e-16 | 23 |
neuron | 1.25e-09 | 33 |
neuronal stem cell | 1.25e-09 | 33 |
neuroblast | 1.25e-09 | 33 |
electrically signaling cell | 1.25e-09 | 33 |
electrically responsive cell | 4.62e-07 | 39 |
electrically active cell | 4.62e-07 | 39 |