FFCP PHASE1:Mm9::chr10:58893747..58893786,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18302 | |EntrezGene=18302 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2567 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_ENSMUST00000162493_5end | |association_with_transcript=47bp_to_ENSMUST00000162493_5end | ||
|cluster_id=chr10:58893747..58893786,- | |||
|description=CAGE_peak_2_at_Oit3_5end | |description=CAGE_peak_2_at_Oit3_5end | ||
|id=chr10:58893747..58893786,- | |id=chr10:58893747..58893786,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.75e-14,6;CL:0000187,3.75e-14,6;CL:0000056,3.75e-14,6;CL:0000222,4.82e-12,7;CL:0002092,2.18e-09,3;CL:0002540,2.18e-09,3;CL:0000355,3.16e-09,9;CL:0000557,3.33e-09,7;CL:0002494,2.38e-08,3;CL:0000737,2.38e-08,3;CL:0000746,2.38e-08,3;CL:0000513,2.38e-08,3;CL:0002453,7.40e-08,8;CL:0000219,9.16e-08,54;CL:0000049,1.25e-07,19;CL:0000192,1.99e-07,3;CL:0000359,1.99e-07,3;CL:0002539,1.99e-07,3;CL:0000514,1.99e-07,3;CL:0000128,6.36e-07,6;CL:0000126,6.36e-07,6;CL:0000127,6.36e-07,6;CL:0002194,8.42e-07,4;CL:0000766,8.42e-07,4;CL:0000234,8.42e-07,4;CL:0000576,8.42e-07,4;CL:0000235,8.42e-07,4;CL:0000864,8.42e-07,4;CL:0002009,8.42e-07,4;CL:0000040,8.42e-07,4;CL:0000559,8.42e-07,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.33e-09!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.85e-17,32;UBERON:0001474,2.76e-10,22;UBERON:0004765,2.76e-10,22;UBERON:0001434,2.76e-10,22;UBERON:0002371,1.10e-09,16;UBERON:0001134,3.16e-09,9;UBERON:0002036,3.16e-09,9;UBERON:0002385,3.16e-09,9;UBERON:0000486,3.16e-09,9;UBERON:0007503,3.16e-09,9;UBERON:0001015,3.16e-09,9;UBERON:0002329,3.16e-09,9;UBERON:0003082,3.16e-09,9;UBERON:0003059,3.16e-09,9;UBERON:0007282,3.16e-09,9;UBERON:0004290,3.16e-09,9;UBERON:0009618,3.16e-09,9;UBERON:0000383,3.06e-08,10;UBERON:0005631,3.99e-08,3;UBERON:0000478,3.99e-08,3;UBERON:0000158,3.99e-08,3;UBERON:0007524,1.96e-07,11;UBERON:0003077,1.96e-07,11;UBERON:0007285,1.96e-07,11;UBERON:0001135,1.99e-07,3;UBERON:0004237,1.99e-07,3;UBERON:0004695,1.99e-07,3;UBERON:0002111,1.99e-07,3;UBERON:0004178,1.99e-07,3;UBERON:0003081,2.51e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.281577444303333,0.468129052643987,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,1.25896817975577,1.62203089951223,1.28482726513177,0,1.74420125104357,3.29529274101708,2.13872888981712,0.839918529752175,2.87505128729943,0,0,0,2.05807548828758,3.43840127926508,2.57836046138721,0,0,0,0.338844532069132,0,7.64914759689189,11.8663963508037,3.5524005747305,3.29560121570245,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.302286240427142,0.289864488701678,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0.511290967734173,0.259786004602869,0,0,0,0,0,0,0.760079596425296,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0.304465478312141,0.922461989024234,0.301445281105245,0.705532242814229,0.628332956648377,2.47194967734374,0.144599356919912,0.884610551949874,1.7794353494215,0.883366073841574,2.42437626567611,0,0,0,0,4.07371423320129,4.19931911695385,1.65191295194984,0,0.915001205637253,0,0,0.255715457330331,0,0,0,2.36373244159177,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0.702213187313235,2.83082697826187,1.13665399758237,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,2.87536413054709,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0.345369963731791,0,4.52373851817817,3.26343410291226,0,0,0,0,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,2.3467170806371,2.33015277950202,0,0,0,0.180938774784468,0.119372344003136,0,0,0,0,0.412773735926445,0.740778109478847,0.188368457004691,0,0,4.41943917984024,5.87796099759364,4.42239916174156,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292373642219257,0,0,0,0,0.179427713218951,0.167884616364078,0.19318959403219,2.25218970541418,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,1.10306105070008,0.888986911206461,0.206035057238894,0.320919209591815,0,0.50695859978048,0.377252682772152,0.280924522409647,0.320125762024346,0.229741875822453,0,0.463537303779422,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.470546902076653,0.0846146078916765,0.365855945745545,0.526139422875686,0.407412341537585,0.561142271657738,0.474540072496697,0.0985044823755635,1.22769312950907,0.309873682371932,0.385813221962283,1.24905288968973,0.935726433781634,0.644613162144895,1.14772999241306,0.441182838239031,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0.281577444303333,0.468129052643987,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,1.25896817975577,1.62203089951223,1.28482726513177,0,1.74420125104357,3.29529274101708,2.13872888981712,0.839918529752175,2.87505128729943,0,0,0,2.05807548828758,3.43840127926508,2.57836046138721,0,0,0,0.338844532069132,0,7.64914759689189,11.8663963508037,3.5524005747305,3.29560121570245,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.302286240427142,0.289864488701678,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0.511290967734173,0.259786004602869,0,0,0,0,0,0,0.760079596425296,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0.304465478312141,0.922461989024234,0.301445281105245,0.705532242814229,0.628332956648377,2.47194967734374,0.144599356919912,0.884610551949874,1.7794353494215,0.883366073841574,2.42437626567611,0,0,0,0,4.07371423320129,4.19931911695385,1.65191295194984,0,0.915001205637253,0,0,0.255715457330331,0,0,0,2.36373244159177,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0.702213187313235,2.83082697826187,1.13665399758237,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,2.87536413054709,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0.345369963731791,0,4.52373851817817,3.26343410291226,0,0,0,0,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,2.3467170806371,2.33015277950202,0,0,0,0.180938774784468,0.119372344003136,0,0,0,0,0.412773735926445,0.740778109478847,0.188368457004691,0,0,4.41943917984024,5.87796099759364,4.42239916174156,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292373642219257,0,0,0,0,0.179427713218951,0.167884616364078,0.19318959403219,2.25218970541418,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,1.10306105070008,0.888986911206461,0.206035057238894,0.320919209591815,0,0.50695859978048,0.377252682772152,0.280924522409647,0.320125762024346,0.229741875822453,0,0.463537303779422,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.470546902076653,0.0846146078916765,0.365855945745545,0.526139422875686,0.407412341537585,0.561142271657738,0.474540072496697,0.0985044823755635,1.22769312950907,0.309873682371932,0.385813221962283,1.24905288968973,0.935726433781634,0.644613162144895,1.14772999241306,0.441182838239031,0.463735671240843 | ||
|short_description=p2@Oit3 | |short_description=p2@Oit3 | ||
}} | }} |
Latest revision as of 02:51, 26 September 2015
Short description: | p2@Oit3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Oit3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2567 |
Association with transcript: | 47bp_to_ENSMUST00000162493_5end |
EntrezGene: | Oit3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.75e-14 | 6 |
muscle cell | 3.75e-14 | 6 |
myoblast | 3.75e-14 | 6 |
mesodermal cell | 4.82e-12 | 7 |
bone marrow cell | 2.18e-09 | 3 |
mesenchymal stem cell of the bone marrow | 2.18e-09 | 3 |
multi-potent skeletal muscle stem cell | 3.16e-09 | 9 |
granulocyte monocyte progenitor cell | 3.33e-09 | 7 |
cardiocyte | 2.38e-08 | 3 |
striated muscle cell | 2.38e-08 | 3 |
cardiac muscle cell | 2.38e-08 | 3 |
cardiac muscle myoblast | 2.38e-08 | 3 |
oligodendrocyte precursor cell | 7.40e-08 | 8 |
motile cell | 9.16e-08 | 54 |
common myeloid progenitor | 1.25e-07 | 19 |
smooth muscle cell | 1.99e-07 | 3 |
vascular associated smooth muscle cell | 1.99e-07 | 3 |
aortic smooth muscle cell | 1.99e-07 | 3 |
smooth muscle myoblast | 1.99e-07 | 3 |
oligodendrocyte | 6.36e-07 | 6 |
macroglial cell | 6.36e-07 | 6 |
astrocyte | 6.36e-07 | 6 |
monopoietic cell | 8.42e-07 | 4 |
myeloid leukocyte | 8.42e-07 | 4 |
phagocyte | 8.42e-07 | 4 |
monocyte | 8.42e-07 | 4 |
macrophage | 8.42e-07 | 4 |
tissue-resident macrophage | 8.42e-07 | 4 |
macrophage dendritic cell progenitor | 8.42e-07 | 4 |
monoblast | 8.42e-07 | 4 |
promonocyte | 8.42e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.85e-17 | 32 |
bone element | 2.76e-10 | 22 |
skeletal element | 2.76e-10 | 22 |
skeletal system | 2.76e-10 | 22 |
bone marrow | 1.10e-09 | 16 |
skeletal muscle tissue | 3.16e-09 | 9 |
striated muscle tissue | 3.16e-09 | 9 |
muscle tissue | 3.16e-09 | 9 |
multilaminar epithelium | 3.16e-09 | 9 |
epithelial vesicle | 3.16e-09 | 9 |
musculature | 3.16e-09 | 9 |
somite | 3.16e-09 | 9 |
myotome | 3.16e-09 | 9 |
presomitic mesoderm | 3.16e-09 | 9 |
presumptive segmental plate | 3.16e-09 | 9 |
dermomyotome | 3.16e-09 | 9 |
trunk paraxial mesoderm | 3.16e-09 | 9 |
musculature of body | 3.06e-08 | 10 |
extraembryonic membrane | 3.99e-08 | 3 |
extraembryonic structure | 3.99e-08 | 3 |
membranous layer | 3.99e-08 | 3 |
dense mesenchyme tissue | 1.96e-07 | 11 |
paraxial mesoderm | 1.96e-07 | 11 |
presumptive paraxial mesoderm | 1.96e-07 | 11 |
smooth muscle tissue | 1.99e-07 | 3 |
blood vessel smooth muscle | 1.99e-07 | 3 |
arterial system smooth muscle | 1.99e-07 | 3 |
artery smooth muscle tissue | 1.99e-07 | 3 |
aorta smooth muscle tissue | 1.99e-07 | 3 |
lateral plate mesoderm | 2.51e-07 | 87 |