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FFCP PHASE1:Mm9::chr9:106379610..106379683,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=27966
|EntrezGene=27966
|HGNC=
|HGNC=
|MCL_coexpression_id=155
|TSSclassifier=NA
|UniProt=Q91WM3
|UniProt=Q91WM3
|association_with_transcript=0bp_to_ENSMUST00000125630,ENSMUST00000127400,NM_145620,uc009rkb.1_5end
|association_with_transcript=0bp_to_ENSMUST00000125630,ENSMUST00000127400,NM_145620,uc009rkb.1_5end
|cluster_id=chr9:106379610..106379683,+
|description=CAGE_peak_1_at_Rrp9_5end
|description=CAGE_peak_1_at_Rrp9_5end
|id=chr9:106379610..106379683,+
|id=chr9:106379610..106379683,+
|ontology_enrichment_celltype=CL:0000548!3.43e-19!115;CL:0000004!3.43e-19!115;CL:0000255!3.43e-19!115;CL:0000144!1.83e-17!121;CL:0000012!1.83e-17!121;CL:0002371!7.35e-17!118;CL:0000034!7.76e-15!97;CL:0000219!1.94e-14!54;CL:0000988!5.55e-14!32;CL:0002032!5.55e-14!32;CL:0000037!5.55e-14!32;CL:0000566!5.55e-14!32;CL:0000837!5.55e-14!32;CL:0000723!1.12e-12!91;CL:0000048!1.12e-12!91;CL:0000063!7.39e-12!66;CL:0002320!1.12e-11!46;CL:0000134!1.12e-11!46;CL:0002031!2.76e-11!25;CL:0000838!9.33e-09!12;CL:0000542!1.32e-08!13;CL:0000051!1.32e-08!13;CL:0000084!3.41e-08!11;CL:0000827!3.41e-08!11;CL:0000738!1.63e-07!17;CL:0002087!1.63e-07!17;CL:0000221!3.46e-07!44;CL:0000133!3.46e-07!44;CL:0000791!3.53e-07!9;CL:0000789!3.53e-07!9;CL:0002420!3.53e-07!9;CL:0002419!3.53e-07!9;CL:0000790!3.53e-07!9;CL:0002319!4.65e-07!43;CL:0000049!6.91e-07!19;CL:0000117!9.79e-07!23;CL:0000337!9.79e-07!23
|ontology_enrichment_celltype=CL:0000548!3.43e-19!115;CL:0000004!3.43e-19!115;CL:0000255!3.43e-19!115;CL:0000144!1.83e-17!121;CL:0000012!1.83e-17!121;CL:0002371!7.35e-17!118;CL:0000034!7.76e-15!97;CL:0000219!1.94e-14!54;CL:0000988!5.55e-14!32;CL:0002032!5.55e-14!32;CL:0000037!5.55e-14!32;CL:0000566!5.55e-14!32;CL:0000837!5.55e-14!32;CL:0000723!1.12e-12!91;CL:0000048!1.12e-12!91;CL:0000063!7.39e-12!66;CL:0002320!1.12e-11!46;CL:0000134!1.12e-11!46;CL:0002031!2.76e-11!25;CL:0000838!9.33e-09!12;CL:0000542!1.32e-08!13;CL:0000051!1.32e-08!13;CL:0000084!3.41e-08!11;CL:0000827!3.41e-08!11;CL:0000738!1.63e-07!17;CL:0002087!1.63e-07!17;CL:0000221!3.46e-07!44;CL:0000133!3.46e-07!44;CL:0000791!3.53e-07!9;CL:0000789!3.53e-07!9;CL:0002420!3.53e-07!9;CL:0002419!3.53e-07!9;CL:0000790!3.53e-07!9;CL:0002319!4.65e-07!43;CL:0000049!6.91e-07!19;CL:0000117!9.79e-07!23;CL:0000337!9.79e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000034,7.76e-15,97;CL:0000219,1.94e-14,54;CL:0000988,5.55e-14,32;CL:0002032,5.55e-14,32;CL:0000037,5.55e-14,32;CL:0000837,5.55e-14,32;CL:0000723,1.12e-12,91;CL:0000048,1.12e-12,91;CL:0002320,1.12e-11,46;CL:0000134,1.12e-11,46;CL:0002031,2.76e-11,25;CL:0000838,9.33e-09,12;CL:0000542,1.32e-08,13;CL:0000051,1.32e-08,13;CL:0000084,3.41e-08,11;CL:0000827,3.41e-08,11;CL:0000738,1.63e-07,17;CL:0002087,1.63e-07,17;CL:0000221,3.46e-07,44;CL:0000133,3.46e-07,44;CL:0000791,3.53e-07,9;CL:0000789,3.53e-07,9;CL:0002420,3.53e-07,9;CL:0002419,3.53e-07,9;CL:0000790,3.53e-07,9;CL:0002319,4.65e-07,43;CL:0000049,6.91e-07,19;CL:0000117,9.79e-07,23;CL:0000337,9.79e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002384!1.12e-11!46;UBERON:0002390!4.22e-10!45;UBERON:0003061!4.22e-10!45;UBERON:0002193!1.84e-09!48;UBERON:0007811!5.11e-08!86;UBERON:0002020!5.59e-08!34;UBERON:0000064!1.73e-07!99;UBERON:0000072!3.28e-07!27;UBERON:0002791!6.71e-07!29;UBERON:0003528!6.71e-07!29;UBERON:0001893!6.71e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.12e-11,46;UBERON:0002390,4.22e-10,45;UBERON:0003061,4.22e-10,45;UBERON:0002193,1.84e-09,48;UBERON:0002405,1.84e-09,48;UBERON:0002020,5.59e-08,34;UBERON:0000072,3.28e-07,27;UBERON:0003528,6.71e-07,29;UBERON:0002791,6.71e-07,29;UBERON:0001893,6.71e-07,29
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5827738,16.062237903021,15.8767851008048,16.0997987931141,18.1240927909327,14.0258920240214,10.9102561557443,7.85267825952089,10.7580427832188,11.8054469486516,20.856638731315,19.5866675317612,27.135192434964,25.6675568614143,28.4151611651008,22.3022085647827,18.7771581833206,23.9576068112868,30.9335066055847,26.5742532908607,19.5860404255349,14.8525226695244,28.9897057864935,34.9217254360413,35.0786222040047,21.3041767844303,18.8747287042202,25.3612398487134,23.1872557664086,22.6164847883851,20.72825141016,17.3421038435366,18.7119131020325,19.0499446447852,17.5315353272353,15.1909357022192,54.1645726232718,78.8584799597291,55.0661541674177,10.4322380777383,14.451550609741,13.1869169472431,12.0046292284277,14.5455910170255,19.2015626489803,28.0798394269378,25.2074025913335,27.1528028103026,23.9778881919725,23.4172108190807,31.0510350106631,25.6683085837806,24.9228324941313,23.2992140288319,29.371819366322,17.1580695562443,25.9515080746284,17.2605769118489,20.9613162627982,20.5904729464016,16.8907513129228,16.4828045791115,13.7995260124481,14.6564382823003,16.4761544928656,16.0332390178165,15.91905626988,12.6129550237592,13.8993834872584,10.9547548995107,15.0649623728312,14.4681915347779,21.0163809409686,16.0446822946493,19.5435473859687,16.1502983604997,19.5517675756803,16.4241450794531,15.0575008664529,17.0921507941187,18.47572526015,18.1518100892112,16.8397101168869,16.2731258780744,12.6939469392866,14.4801589092078,21.6892452879935,16.7331788480843,13.1176495467176,15.9878769880285,11.2287172053796,9.45432637812513,11.0947232599929,15.4413993383661,10.434052602919
|phase1_expression=19.0577128054705,7.32848356042658,5.0049916332849,3.62957053568196,3.50627010962443,28.2037176811975,23.3612640595526,40.8029702075381,274.256430751447,291.17627074456,284.050609286113,269.629897404237,43.4849854025263,44.2347236240127,25.9825614216217,34.6232707236602,20.9868563438444,34.0699138586897,29.0682599244166,30.1316652776601,21.2608225377674,36.1419062371222,41.5307664730907,19.1990907352088,19.7291981717766,9.18771142584032,13.7843838770904,20.6852383378453,13.1116159424898,12.6015064879965,21.2861290229093,134.626502773442,139.004641994113,63.3926724061755,43.0388913429399,48.0418125086043,45.5297664465083,1.67412652294763,6.2506827561904,3.14114246384279,1.17646297606203,0.683045484958446,2.42755176515577,15.2335149750449,15.2065396829272,12.114085642671,32.0780451182696,37.5003268974368,20.8701873597748,24.692597182434,25.1975558925653,33.0630898039435,42.9523471507805,47.1485392307374,61.8412590422134,17.2363822144084,16.3324060765091,18.0485232297105,26.3011399117477,28.5655128806898,29.1562445612842,45.4051672972637,30.2360230677787,40.9454371363037,35.5991890524111,40.4973665519277,28.16241038873,33.8112108682968,29.8626083448416,35.5065617812346,41.6443423475736,31.7072592688222,28.2711732418065,28.2953746186544,36.1337425738751,41.3648453974509,17.6185409599022,19.5361627270337,20.1224558565679,24.2670769423557,28.5441448039518,27.6084086395083,26.5223849051312,25.3243174514256,20.7805616976462,22.3917724959987,23.7760706934502,23.2999307281626,82.9201816998365,27.5836194389767,24.9283460283443,18.0689014166091,29.2387673494333,12.9528765993076,9.09686984426737,8.06448396775204,17.6959969366007,12.2709832256202,12.2099422163348,15.1936017039446,22.6757905840456,26.9485602570067,43.3168907501298,42.6640021891999,36.8034769719064,41.2976580724411,39.9364311561679,11.7609396110632,12.6879562987114,13.3597925158342,28.6250789164124,24.9661692215956,18.6798552777407,19.7446659123936,15.2865319276416,11.9383261763192,6.17987419335935,10.8449517689934,9.73071607144862,13.1031148457401,12.1462835153216,13.091631834651,20.5030937339934,12.8823550685081,16.546289838263,16.0937944781413,28.8754450059268,33.5945529356308,27.7013095019281,18.2744580073884,23.7900313465686,27.2669944084916,15.2965401769203,20.4572365864264,18.4931359658008,17.6842976743856,12.6280811174392,13.1871388846699,12.8888606801174,10.5220927943237,24.8530046058764,24.1397209655147,22.147641966058,17.1803492332715,14.5598108183842,17.5515796790244,17.7096259417887,17.3331258395141,25.0058871802097,16.6413350547681,14.4279921814438,22.1387689751851,15.2925987074079,10.447564995665,10.2891068203972,27.6657630877706,50.5593494865529,40.1462735098956,31.5421484329108,15.9486844852336,17.5894544985822,16.9258337773354,11.8372367792605,14.3637889175605,15.1181770629631,15.5797742982773,15.0233104783787,12.6106569756543,14.1521470925593,14.1184019108022,12.5656654796076,16.5205985790626,15.8076083009556,16.7758023450465,16.1923260394378,23.4622516224768,2.31293148088659,16.3959351331397,21.3288250535234,23.6881405297647,19.4589866596361,16.1346819698674,16.9007313322101,12.5548913234289,14.2358718463353,11.8583247401288,15.5827829456167,12.1363447945102,12.2827374885046,12.5834717211591,11.8875927431082,10.7536287557358,27.5018456381968,24.6776787237014,11.270773567308,18.9395734896142,17.6496763322539,14.0271639780637,11.6355228308633,10.4803205065518,8.94892748695836,8.76119863844784,17.4907049981418,28.1968228660199,27.125141325622,26.084005036643,18.2574109249653,18.3294641411837,17.0599320693551,11.2201493605816,17.5106044917038,14.2771934857802,14.3768206527355,8.93138274404408,9.98520553966594,10.6083128737787,11.4814344654024,12.5435315554475,11.8242041706627,27.0972718831793,18.740972290833,19.0114496068211,16.6630076284836,12.3954630506944,9.52174563544055,10.3420833364633,11.0344600874334,12.6234873099802,10.8429242687091,14.0922450655535,13.4694285855399,9.9807850421243,15.0791283939272,13.053736411649,25.0799779239708,11.8652800911035,17.5000143086693,12.7760738385501,16.8852993737976,10.6037789425837,17.3529520678941,15.6175497718655,14.2179442503647,17.6836910484888,17.6010952525091,15.286132662597,13.7635638569464,17.2430956167674,14.6256477840214,17.6726724031994,11.639086987078,18.5188227813945,14.4969393824683,13.857490329693,5.30980553359851,29.1336763385978,32.9532677091579,23.3870298897314,25.986566573508,16.2940628410282,21.7079766261306,14.9048829085777,21.3898427030833,28.4433082142234,20.0295356292498,21.6584640821192,11.234506989875,21.4272701897259,21.7322588755028,20.5763553630329,11.5271151867478,13.7343989553594,14.6448628335888,15.22324745573,16.192347856396,8.26145076368899,17.201215048287,15.9939665353236,9.36493674836252,13.0879047094098,19.8158091045207,15.9216672752709,15.7399651780119,12.7943458387252,18.4540551261681,17.3364969089107,21.1121761201471,19.9670564424972,17.6335553760122,20.132479242174,21.4172821792258,24.7714070612875,22.5265957301211,13.3653886522116,20.5618395827738,16.062237903021,15.8767851008048,16.0997987931141,18.1240927909327,14.0258920240214,10.9102561557443,7.85267825952089,10.7580427832188,11.8054469486516,20.856638731315,19.5866675317612,27.135192434964,25.6675568614143,28.4151611651008,22.3022085647827,18.7771581833206,23.9576068112868,30.9335066055847,26.5742532908607,19.5860404255349,14.8525226695244,28.9897057864935,34.9217254360413,35.0786222040047,21.3041767844303,18.8747287042202,25.3612398487134,23.1872557664086,22.6164847883851,20.72825141016,17.3421038435366,18.7119131020325,19.0499446447852,17.5315353272353,15.1909357022192,54.1645726232718,78.8584799597291,55.0661541674177,10.4322380777383,14.451550609741,13.1869169472431,12.0046292284277,14.5455910170255,19.2015626489803,28.0798394269378,25.2074025913335,27.1528028103026,23.9778881919725,23.4172108190807,31.0510350106631,25.6683085837806,24.9228324941313,23.2992140288319,29.371819366322,17.1580695562443,25.9515080746284,17.2605769118489,20.9613162627982,20.5904729464016,16.8907513129228,16.4828045791115,13.7995260124481,14.6564382823003,16.4761544928656,16.0332390178165,15.91905626988,12.6129550237592,13.8993834872584,10.9547548995107,15.0649623728312,14.4681915347779,21.0163809409686,16.0446822946493,19.5435473859687,16.1502983604997,19.5517675756803,16.4241450794531,15.0575008664529,17.0921507941187,18.47572526015,18.1518100892112,16.8397101168869,16.2731258780744,12.6939469392866,14.4801589092078,21.6892452879935,16.7331788480843,13.1176495467176,15.9878769880285,11.2287172053796,9.45432637812513,11.0947232599929,15.4413993383661,10.434052602919
|short_description=p1@Rrp9
|short_description=p1@Rrp9
}}
}}

Latest revision as of 02:59, 26 September 2015

Short description:p1@Rrp9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rrp9_5end
Coexpression cluster:MCL_coexpression_mm9:155
Association with transcript: 0bp_to_ENSMUST00000125630, ENSMUST00000127400, NM_145620, uc009rkb.1_5end
EntrezGene:Rrp9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rrp9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G719.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I728.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I823.36
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E940.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7274.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2291.18
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6284.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1269.63
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E443.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E844.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A125.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A334.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A520.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A234.07
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A429.07
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A630.13
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H236.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I941.53
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.73
GP2+ M cell, pool1.CNhs13228.11845-124H99.19
GP2+ M cell, pool2.CNhs13231.11846-124I113.78
GP2+ M cell, pool3.CNhs13240.11847-124I220.69
Ileum epithelium, pool1.CNhs13199.10252-104B913.11
Ileum epithelium, pool2.CNhs13232.10253-104C112.60
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C821.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3134.63
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6139.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F543.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F648.04
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F745.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D815.23
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.21
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.11
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B732.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C237.50
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B820.87
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C324.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C425.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C433.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A242.95
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I947.15
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A161.84
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C117.24
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.33
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C518.05
Mouse Granule cells, donor1.CNhs12131.11713-123C326.30
Mouse Granule cells, donor2.CNhs12357.11731-123E328.57
Mouse Granule cells, donor3.CNhs12108.11636-122C729.16
Mouse Meningeal cells, donor1.CNhs12132.11716-123C645.41
Mouse Meningeal cells, donor3.CNhs12109.11639-122D130.24
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C740.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E735.60
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D240.50
Mouse Microglia, donor1.CNhs12629.11718-123C828.16
Mouse Microglia, donor2.CNhs12634.11736-123E833.81
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D529.86
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F535.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D941.64
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F131.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D528.27
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D228.30
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F236.13
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D641.36
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.54
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.12
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.27
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F428.54
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D827.61
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E426.52
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E525.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.39
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.78
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E123.30
Mouse Schwann, donor1.CNhs12507.11728-123D982.92
Mouse Schwann, donor2.CNhs12573.11746-123F927.58
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G324.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C429.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.95
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H126.95
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I843.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G136.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G241.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G339.94
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.76
accessory axillary lymph node, adult.CNhs10475.1063-29H912.69
adrenal gland, adult.CNhs10508.49-24D713.36
adrenal gland, embryo E14.CNhs11038.406-44C528.63
adrenal gland, embryo E16.CNhs11004.1254-43D624.97
adrenal gland, embryo E17.CNhs11043.1263-45I118.68
adrenal gland, embryo E18.CNhs11026.1262-18F519.74
adrenal gland, neonate N00.CNhs11191.1311-23C115.29
adrenal gland, neonate N25.CNhs11223.1377-27I311.94
amnion, adult pregnant day17.5.CNhs10488.583-22A86.18
aorta, adult.CNhs10498.46-23H110.84
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F513.10
bone (os femoris), neonate N16.CNhs11225.1525-43A612.15
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B212.88
cerebellum, neonate N30.CNhs11135.1395-42I216.55
colon, adult.CNhs10468.36-18H716.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C728.88
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D133.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D427.70
corpora quadrigemina, adult.CNhs10501.16-22A418.27
corpus striatum, adult.CNhs10487.19-21D823.79
corpus striatum, neonate N00.CNhs11226.630-43F127.27
cortex, adult.CNhs10473.12-14D515.30
cortex, neonate N30.CNhs11107.1392-42F220.46
diencephalon, adult.CNhs10482.20-12F218.49
diencephalon, neonate N30.CNhs11201.1388-42B217.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.19
epididymis, adult.CNhs10490.58-23B212.89
eyeball, adult.CNhs10484.31-12G410.52
eyeball, embryo E12.CNhs11016.345-16C624.85
eyeball, embryo E14.CNhs10521.399-16E224.14
eyeball, embryo E15.CNhs10593.426-16C922.15
eyeball, embryo E17.CNhs11023.1261-18D417.18
eyeball, neonate N00.CNhs11207.633-15C614.56
eyeball, neonate N01.CNhs11140.1532-43E717.55
eyeball, neonate N02.CNhs11205.1551-44G817.71
eyeball, neonate N16.CNhs11188.777-19A217.33
forelimb, embryo E11.CNhs10596.335-25E225.01
forelimb, embryo E12.CNhs10600.359-14H216.64
forelimb, embryo E13.CNhs10589.384-1E214.43
forelimb, embryo E14.CNhs10577.413-26A822.14
forelimb, embryo E15.CNhs11007.437-20E715.29
forelimb, embryo E17.CNhs10598.1517-43C410.45
forelimb, embryo E18.CNhs11008.1520-43B510.29
gonad, embryo E13.CNhs11044.1564-45I627.67
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C850.56
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D240.15
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D531.54
heart, embryo E11.CNhs10586.331-24E915.95
heart, embryo E12.CNhs11015.353-12F517.59
heart, embryo E13.CNhs11013.376-3I916.93
heart, embryo E14.CNhs10597.403-26D411.84
heart, embryo E15.CNhs11017.431-16C814.36
heart, embryo E16.CNhs11021.457-17C615.12
heart, embryo E17.CNhs11025.479-18E515.58
heart, embryo E18.CNhs11030.1283-20G315.02
heart, neonate N00.CNhs11213.639-21E312.61
heart, neonate N03.CNhs11221.1349-25I214.15
heart, neonate N10.CNhs11118.749-24G114.12
heart, neonate N16.CNhs11209.782-15G112.57
heart, neonate N20.CNhs11127.821-26I616.52
heart, neonate N25.CNhs11196.1351-25D315.81
heart, neonate N30.CNhs11202.1390-42D216.78
hippocampus, adult.CNhs10478.13-16E816.19
hippocampus, neonate N00.CNhs11228.627-43G123.46
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A316.40
intestine, embryo E12.CNhs11019.1251-16I521.33
intestine, embryo E13.CNhs11010.381-16D523.69
intestine, embryo E15.CNhs10602.976-16D819.46
intestine, embryo E16.CNhs10585.463-22H416.13
intestine, embryo E17.CNhs10582.482-18D316.90
intestine, embryo E18.CNhs10526.1289-20F712.55
intestine, neonate N00.CNhs11126.644-26D114.24
intestine, neonate N01.CNhs11192.1322-23E911.86
intestine, neonate N06.CNhs11102.688-20B815.58
intestine, neonate N07.CNhs11095.720-20F212.14
intestine, neonate N10.CNhs11098.755-23A512.28
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E311.89
intestine, neonate N30.CNhs11131.1384-42G110.75
kidney, embryo E14.CNhs10606.411-4I927.50
kidney, embryo E15.CNhs10997.434-16F824.68
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I218.94
kidney, embryo E18.CNhs11001.1288-20C717.65
kidney, neonate N00.CNhs11214.646-21G714.03
kidney, neonate N10.CNhs11206.758-6D511.64
kidney, neonate N20.CNhs11113.832-19I110.48
kidney, neonate N25.CNhs11122.1353-25F38.95
kidney, neonate N30.CNhs11203.1385-42H18.76
liver, adult pregnant day01.CNhs10466.508-5B217.49
liver, embryo E12.CNhs10601.355-15F828.20
liver, embryo E13.CNhs10524.378-3H627.13
liver, embryo E14.CNhs10594.409-16E126.08
liver, embryo E15.CNhs10520.433-16D718.26
liver, embryo E16.CNhs10523.462-17F518.33
liver, embryo E17.CNhs10510.481-18A317.06
liver, embryo E18.CNhs10579.499-43G411.22
liver, neonate N00.CNhs11117.641-24F417.51
liver, neonate N03.CNhs11123.1345-25G214.28
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H28.93
liver, neonate N10.CNhs11115.751-24B99.99
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H111.48
liver, neonate N30.CNhs11106.1382-42D112.54
lung, adult.CNhs10474.28-22B111.82
lung, embryo E12.CNhs10522.354-16G227.10
lung, embryo E14.CNhs10604.404-26F818.74
lung, embryo E15.CNhs11020.432-17C519.01
lung, embryo E16.CNhs10998.458-17B616.66
lung, embryo E17.CNhs10605.480-44A612.40
lung, embryo E18.CNhs10583.1287-20I69.52
lung, neonate N00.CNhs11224.640-42C610.34
lung, neonate N06.CNhs11212.683-20E511.03
lung, neonate N07.CNhs11111.715-19A312.62
lung, neonate N10.CNhs11219.750-23E610.84
lung, neonate N20.CNhs11109.822-18A414.09
lung, neonate N25.CNhs11119.1359-25C713.47
lung, neonate N30.CNhs11133.1394-42H29.98
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.05
mammary gland, adult lactating day02.CNhs10480.595-22B625.08
mammary gland, adult pregnant day19.CNhs10476.588-5H211.87
medulla oblongata, adult.CNhs10477.17-12C217.50
medulla oblongata, neonate N30.CNhs11200.1396-42A312.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.60
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.35
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.62
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.68
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.60
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.76
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D517.24
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D614.63
olfactory brain, adult.CNhs10489.18-22I917.67
ovary, adult.CNhs10507.91-2I711.64
ovary, embryo E18.CNhs11040.505-44H718.52
ovary, neonate N00.CNhs11217.1299-22I414.50
oviduct, adult pregnant day01.CNhs10500.988-6G613.86
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F429.13
pancreas, embryo E15.CNhs11042.1556-45F232.95
pancreas, embryo E16.CNhs11003.460-26E523.39
pancreas, embryo E17.CNhs10599.1558-45G325.99
pancreas, embryo E18.CNhs10580.1535-43I716.29
pancreas, neonate N00.CNhs11105.645-26G921.71
pancreas, neonate N01.CNhs11138.1531-43D714.90
pancreas, neonate N02.CNhs11139.1539-43D821.39
pancreas, neonate N16.CNhs11136.787-43B628.44
pancreas, neonate N25.CNhs11094.1555-45E220.03
pancreas, neonate N30.CNhs11182.1548-44H521.66
pituitary gland, adult.CNhs10493.21-1G811.23
pituitary gland, embryo E12.CNhs11018.346-16E621.43
pituitary gland, embryo E13.CNhs11009.370-44C721.73
pituitary gland, embryo E14.CNhs11037.398-44A520.58
pituitary gland, embryo E15.CNhs10592.427-16B911.53
pituitary gland, embryo E16.CNhs11036.449-43F613.73
pituitary gland, embryo E17.CNhs11039.1265-44F514.64
pituitary gland, neonate N00.CNhs11190.1308-22E915.22
placenta, adult pregnant day10.CNhs10472.539-13I716.19
placenta, adult pregnant day17.CNhs10464.577-18G38.26
prostate, adult.CNhs10470.859-1F817.20
skin, adult.CNhs10492.30-1C315.99
skin, neonate N00.CNhs11124.650-25G49.36
skin, neonate N03.CNhs11215.662-22H313.09
skin, neonate N06.CNhs11097.693-20I519.82
skin, neonate N10.CNhs11108.762-6C415.92
small intestine, neonate N16.CNhs11114.790-21I115.74
spinal cord, adult.CNhs10505.24-13C912.79
spleen, adult.CNhs10465.25-2G218.45
spleen, embryo E16.CNhs11035.461-43C117.34
spleen, embryo E18.CNhs11011.1271-21F221.11
spleen, neonate N10.CNhs11116.752-24D119.97
spleen, neonate N20.CNhs11112.824-19H117.63
spleen, neonate N25.CNhs11099.1354-25G320.13
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C621.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C924.77
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D322.53
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E320.56
stomach, embryo E15.CNhs10603.1252-16G816.06
stomach, embryo E16.CNhs11022.459-17D415.88
stomach, embryo E17.CNhs11006.1035-18D516.10
stomach, embryo E18.CNhs10999.1286-20C618.12
stomach, neonate N03.CNhs11193.1340-24B814.03
stomach, neonate N07.CNhs11210.718-18A910.91
stomach, neonate N25.CNhs11104.1355-25E47.85
stomach, neonate N30.CNhs11134.1386-42I110.76
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G520.86
testis, embryo E13.CNhs11031.389-23F519.59
testis, embryo E15.CNhs11034.443-27C527.14
testis, embryo E16.CNhs11033.470-26G525.67
testis, embryo E17.CNhs11029.486-18I528.42
testis, embryo E18.CNhs11027.503-18G522.30
testis, neonate N00.CNhs11189.1300-22B718.78
testis, neonate N07.CNhs11222.726-26I423.96
testis, neonate N10.CNhs11204.763-44D930.93
testis, neonate N20.CNhs11110.839-18H326.57
testis, neonate N30.CNhs11130.1391-42E219.59
thymus, adult.CNhs10471.38-12B514.85
thymus, embryo E14.CNhs11041.402-44I428.99
thymus, embryo E15.CNhs11005.430-45I234.92
thymus, embryo E16.CNhs11002.456-26C535.08
thymus, embryo E17.CNhs10581.478-18C121.30
thymus, embryo E18.CNhs10595.1273-19G418.87
thymus, neonate N02.CNhs11181.1541-43F825.36
thymus, neonate N03.CNhs11137.2104-43C723.19
thymus, neonate N06.CNhs11197.681-26C422.62
thymus, neonate N07.CNhs11211.713-19D320.73
thymus, neonate N10.CNhs11194.748-24E417.34
thymus, neonate N20.CNhs11186.820-7A218.71
thymus, neonate N25.CNhs11125.1362-25G719.05
thymus, neonate N30.CNhs11132.1393-42G217.53
tongue, adult.CNhs10499.32-1B415.19
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H354.16
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F778.86
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G555.07
urinary bladder, adult.CNhs10481.879-12E410.43
uterus, adult pregnant day19.CNhs10497.590-15F514.45
uterus, adult.CNhs10509.92-27E513.19
vagina, adult.CNhs10502.89-27D512.00
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A228.08
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.21
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D727.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A523.42
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A725.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.92
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.30
whole body, embryo E11.CNhs11014.324-5I829.37
whole body, embryo E12.CNhs10587.857-27C917.16
whole body, embryo E13.CNhs10512.372-23H225.95
whole body, embryo E14.5.CNhs10578.420-27D217.26
whole body, embryo E14.CNhs10519.395-14B120.96
whole body, embryo E16.CNhs10514.453-14F220.59
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.03
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.92
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.61
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.02
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.55
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.42
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.06
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.09
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.73
whole body, embryo E17.5.CNhs10513.490-9F913.12
whole body, embryo E17.CNhs10517.475-3I515.99
whole body, embryo E18.CNhs10516.493-3B311.23
whole body, neonate N00.CNhs10525.657-19C29.45
whole body, neonate N01.CNhs10576.659-23C611.09
whole body, neonate N06.CNhs10515.692-21D115.44
whole body, neonate N10.CNhs10518.761-6B410.43





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
stem cell7.76e-1597
motile cell1.94e-1454
hematopoietic cell5.55e-1432
hematopoietic oligopotent progenitor cell5.55e-1432
hematopoietic stem cell5.55e-1432
hematopoietic multipotent progenitor cell5.55e-1432
somatic stem cell1.12e-1291
multi fate stem cell1.12e-1291
connective tissue cell1.12e-1146
mesenchymal cell1.12e-1146
hematopoietic lineage restricted progenitor cell2.76e-1125
lymphoid lineage restricted progenitor cell9.33e-0912
lymphocyte1.32e-0813
common lymphoid progenitor1.32e-0813
T cell3.41e-0811
pro-T cell3.41e-0811
leukocyte1.63e-0717
nongranular leukocyte1.63e-0717
ectodermal cell3.46e-0744
neurectodermal cell3.46e-0744
mature alpha-beta T cell3.53e-079
alpha-beta T cell3.53e-079
immature T cell3.53e-079
mature T cell3.53e-079
immature alpha-beta T cell3.53e-079
neural cell4.65e-0743
common myeloid progenitor6.91e-0719
CNS neuron (sensu Vertebrata)9.79e-0723
neuroblast (sensu Vertebrata)9.79e-0723

Uber anatomy
Ontology termp-valuen
connective tissue1.12e-1146
hematopoietic system4.22e-1045
blood island4.22e-1045
hemolymphoid system1.84e-0948
immune system1.84e-0948
gray matter5.59e-0834
segment of respiratory tract3.28e-0727
brain grey matter6.71e-0729
regional part of telencephalon6.71e-0729
telencephalon6.71e-0729
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