FFCP PHASE1:Mm9::chr9:106379610..106379683,+: Difference between revisions
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{{FFCP|EntrezGene=27966|HGNC=|MCL_coexpression_id=155|UniProt=Q91WM3|association_with_transcript=0bp_to_ENSMUST00000125630,ENSMUST00000127400,NM_145620,uc009rkb.1_5end|description=CAGE_peak_1_at_Rrp9_5end|id=chr9:106379610..106379683,+|ontology_enrichment_celltype=CL:0000548!3.43e-19!115;CL:0000004!3.43e-19!115;CL:0000255!3.43e-19!115;CL:0000144!1.83e-17!121;CL:0000012!1.83e-17!121;CL:0002371!7.35e-17!118;CL:0000034!7.76e-15!97;CL:0000219!1.94e-14!54;CL:0000988!5.55e-14!32;CL:0002032!5.55e-14!32;CL:0000037!5.55e-14!32;CL:0000566!5.55e-14!32;CL:0000837!5.55e-14!32;CL:0000723!1.12e-12!91;CL:0000048!1.12e-12!91;CL:0000063!7.39e-12!66;CL:0002320!1.12e-11!46;CL:0000134!1.12e-11!46;CL:0002031!2.76e-11!25;CL:0000838!9.33e-09!12;CL:0000542!1.32e-08!13;CL:0000051!1.32e-08!13;CL:0000084!3.41e-08!11;CL:0000827!3.41e-08!11;CL:0000738!1.63e-07!17;CL:0002087!1.63e-07!17;CL:0000221!3.46e-07!44;CL:0000133!3.46e-07!44;CL:0000791!3.53e-07!9;CL:0000789!3.53e-07!9;CL:0002420!3.53e-07!9;CL:0002419!3.53e-07!9;CL:0000790!3.53e-07!9;CL:0002319!4.65e-07!43;CL:0000049!6.91e-07!19;CL:0000117!9.79e-07!23;CL:0000337!9.79e-07!23|ontology_enrichment_celltype_v019_2=CL:0000034,7.76e-15,97;CL:0000219,1.94e-14,54;CL:0000988,5.55e-14,32;CL:0002032,5.55e-14,32;CL:0000037,5.55e-14,32;CL:0000837,5.55e-14,32;CL:0000723,1.12e-12,91;CL:0000048,1.12e-12,91;CL:0002320,1.12e-11,46;CL:0000134,1.12e-11,46;CL:0002031,2.76e-11,25;CL:0000838,9.33e-09,12;CL:0000542,1.32e-08,13;CL:0000051,1.32e-08,13;CL:0000084,3.41e-08,11;CL:0000827,3.41e-08,11;CL:0000738,1.63e-07,17;CL:0002087,1.63e-07,17;CL:0000221,3.46e-07,44;CL:0000133,3.46e-07,44;CL:0000791,3.53e-07,9;CL:0000789,3.53e-07,9;CL:0002420,3.53e-07,9;CL:0002419,3.53e-07,9;CL:0000790,3.53e-07,9;CL:0002319,4.65e-07,43;CL:0000049,6.91e-07,19;CL:0000117,9.79e-07,23;CL:0000337,9.79e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.12e-11!46;UBERON:0002390!4.22e-10!45;UBERON:0003061!4.22e-10!45;UBERON:0002193!1.84e-09!48;UBERON:0007811!5.11e-08!86;UBERON:0002020!5.59e-08!34;UBERON:0000064!1.73e-07!99;UBERON:0000072!3.28e-07!27;UBERON:0002791!6.71e-07!29;UBERON:0003528!6.71e-07!29;UBERON:0001893!6.71e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.12e-11,46;UBERON:0002390,4.22e-10,45;UBERON:0003061,4.22e-10,45;UBERON:0002193,1.84e-09,48;UBERON:0002405,1.84e-09,48;UBERON:0002020,5.59e-08,34;UBERON:0000072,3.28e-07,27;UBERON:0003528,6.71e-07,29;UBERON:0002791,6.71e-07,29;UBERON:0001893,6.71e-07,29|phase1_expression=19.0577128054705,7.32848356042658,5.0049916332849,3.62957053568196,3.50627010962443,28.2037176811975,23.3612640595526,40.8029702075381,274.256430751447,291.17627074456,284.050609286113,269.629897404237,43.4849854025263,44.2347236240127,25.9825614216217,34.6232707236602,20.9868563438444,34.0699138586897,29.0682599244166,30.1316652776601,21.2608225377674,36.1419062371222,41.5307664730907,19.1990907352088,19.7291981717766,9.18771142584032,13.7843838770904,20.6852383378453,13.1116159424898,12.6015064879965,21.2861290229093,134.626502773442,139.004641994113,63.3926724061755,43.0388913429399,48.0418125086043,45.5297664465083,1.67412652294763,6.2506827561904,3.14114246384279,1.17646297606203,0.683045484958446,2.42755176515577,15.2335149750449,15.2065396829272,12.114085642671,32.0780451182696,37.5003268974368,20.8701873597748,24.692597182434,25.1975558925653,33.0630898039435,42.9523471507805,47.1485392307374,61.8412590422134,17.2363822144084,16.3324060765091,18.0485232297105,26.3011399117477,28.5655128806898,29.1562445612842,45.4051672972637,30.2360230677787,40.9454371363037,35.5991890524111,40.4973665519277,28.16241038873,33.8112108682968,29.8626083448416,35.5065617812346,41.6443423475736,31.7072592688222,28.2711732418065,28.2953746186544,36.1337425738751,41.3648453974509,17.6185409599022,19.5361627270337,20.1224558565679,24.2670769423557,28.5441448039518,27.6084086395083,26.5223849051312,25.3243174514256,20.7805616976462,22.3917724959987,23.7760706934502,23.2999307281626,82.9201816998365,27.5836194389767,24.9283460283443,18.0689014166091,29.2387673494333,12.9528765993076,9.09686984426737,8.06448396775204,17.6959969366007,12.2709832256202,12.2099422163348,15.1936017039446,22.6757905840456,26.9485602570067,43.3168907501298,42.6640021891999,36.8034769719064,41.2976580724411,39.9364311561679,11.7609396110632,12.6879562987114,13.3597925158342,28.6250789164124,24.9661692215956,18.6798552777407,19.7446659123936,15.2865319276416,11.9383261763192,6.17987419335935,10.8449517689934,9.73071607144862,13.1031148457401,12.1462835153216,13.091631834651,20.5030937339934,12.8823550685081,16.546289838263,16.0937944781413,28.8754450059268,33.5945529356308,27.7013095019281,18.2744580073884,23.7900313465686,27.2669944084916,15.2965401769203,20.4572365864264,18.4931359658008,17.6842976743856,12.6280811174392,13.1871388846699,12.8888606801174,10.5220927943237,24.8530046058764,24.1397209655147,22.147641966058,17.1803492332715,14.5598108183842,17.5515796790244,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27966 | |||
|HGNC= | |||
|MCL_coexpression_id=155 | |||
|TSSclassifier=NA | |||
|UniProt=Q91WM3 | |||
|association_with_transcript=0bp_to_ENSMUST00000125630,ENSMUST00000127400,NM_145620,uc009rkb.1_5end | |||
|cluster_id=chr9:106379610..106379683,+ | |||
|description=CAGE_peak_1_at_Rrp9_5end | |||
|id=chr9:106379610..106379683,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.43e-19!115;CL:0000004!3.43e-19!115;CL:0000255!3.43e-19!115;CL:0000144!1.83e-17!121;CL:0000012!1.83e-17!121;CL:0002371!7.35e-17!118;CL:0000034!7.76e-15!97;CL:0000219!1.94e-14!54;CL:0000988!5.55e-14!32;CL:0002032!5.55e-14!32;CL:0000037!5.55e-14!32;CL:0000566!5.55e-14!32;CL:0000837!5.55e-14!32;CL:0000723!1.12e-12!91;CL:0000048!1.12e-12!91;CL:0000063!7.39e-12!66;CL:0002320!1.12e-11!46;CL:0000134!1.12e-11!46;CL:0002031!2.76e-11!25;CL:0000838!9.33e-09!12;CL:0000542!1.32e-08!13;CL:0000051!1.32e-08!13;CL:0000084!3.41e-08!11;CL:0000827!3.41e-08!11;CL:0000738!1.63e-07!17;CL:0002087!1.63e-07!17;CL:0000221!3.46e-07!44;CL:0000133!3.46e-07!44;CL:0000791!3.53e-07!9;CL:0000789!3.53e-07!9;CL:0002420!3.53e-07!9;CL:0002419!3.53e-07!9;CL:0000790!3.53e-07!9;CL:0002319!4.65e-07!43;CL:0000049!6.91e-07!19;CL:0000117!9.79e-07!23;CL:0000337!9.79e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,7.76e-15,97;CL:0000219,1.94e-14,54;CL:0000988,5.55e-14,32;CL:0002032,5.55e-14,32;CL:0000037,5.55e-14,32;CL:0000837,5.55e-14,32;CL:0000723,1.12e-12,91;CL:0000048,1.12e-12,91;CL:0002320,1.12e-11,46;CL:0000134,1.12e-11,46;CL:0002031,2.76e-11,25;CL:0000838,9.33e-09,12;CL:0000542,1.32e-08,13;CL:0000051,1.32e-08,13;CL:0000084,3.41e-08,11;CL:0000827,3.41e-08,11;CL:0000738,1.63e-07,17;CL:0002087,1.63e-07,17;CL:0000221,3.46e-07,44;CL:0000133,3.46e-07,44;CL:0000791,3.53e-07,9;CL:0000789,3.53e-07,9;CL:0002420,3.53e-07,9;CL:0002419,3.53e-07,9;CL:0000790,3.53e-07,9;CL:0002319,4.65e-07,43;CL:0000049,6.91e-07,19;CL:0000117,9.79e-07,23;CL:0000337,9.79e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.12e-11!46;UBERON:0002390!4.22e-10!45;UBERON:0003061!4.22e-10!45;UBERON:0002193!1.84e-09!48;UBERON:0007811!5.11e-08!86;UBERON:0002020!5.59e-08!34;UBERON:0000064!1.73e-07!99;UBERON:0000072!3.28e-07!27;UBERON:0002791!6.71e-07!29;UBERON:0003528!6.71e-07!29;UBERON:0001893!6.71e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.12e-11,46;UBERON:0002390,4.22e-10,45;UBERON:0003061,4.22e-10,45;UBERON:0002193,1.84e-09,48;UBERON:0002405,1.84e-09,48;UBERON:0002020,5.59e-08,34;UBERON:0000072,3.28e-07,27;UBERON:0003528,6.71e-07,29;UBERON:0002791,6.71e-07,29;UBERON:0001893,6.71e-07,29 | |||
|phase1_expression=19.0577128054705,7.32848356042658,5.0049916332849,3.62957053568196,3.50627010962443,28.2037176811975,23.3612640595526,40.8029702075381,274.256430751447,291.17627074456,284.050609286113,269.629897404237,43.4849854025263,44.2347236240127,25.9825614216217,34.6232707236602,20.9868563438444,34.0699138586897,29.0682599244166,30.1316652776601,21.2608225377674,36.1419062371222,41.5307664730907,19.1990907352088,19.7291981717766,9.18771142584032,13.7843838770904,20.6852383378453,13.1116159424898,12.6015064879965,21.2861290229093,134.626502773442,139.004641994113,63.3926724061755,43.0388913429399,48.0418125086043,45.5297664465083,1.67412652294763,6.2506827561904,3.14114246384279,1.17646297606203,0.683045484958446,2.42755176515577,15.2335149750449,15.2065396829272,12.114085642671,32.0780451182696,37.5003268974368,20.8701873597748,24.692597182434,25.1975558925653,33.0630898039435,42.9523471507805,47.1485392307374,61.8412590422134,17.2363822144084,16.3324060765091,18.0485232297105,26.3011399117477,28.5655128806898,29.1562445612842,45.4051672972637,30.2360230677787,40.9454371363037,35.5991890524111,40.4973665519277,28.16241038873,33.8112108682968,29.8626083448416,35.5065617812346,41.6443423475736,31.7072592688222,28.2711732418065,28.2953746186544,36.1337425738751,41.3648453974509,17.6185409599022,19.5361627270337,20.1224558565679,24.2670769423557,28.5441448039518,27.6084086395083,26.5223849051312,25.3243174514256,20.7805616976462,22.3917724959987,23.7760706934502,23.2999307281626,82.9201816998365,27.5836194389767,24.9283460283443,18.0689014166091,29.2387673494333,12.9528765993076,9.09686984426737,8.06448396775204,17.6959969366007,12.2709832256202,12.2099422163348,15.1936017039446,22.6757905840456,26.9485602570067,43.3168907501298,42.6640021891999,36.8034769719064,41.2976580724411,39.9364311561679,11.7609396110632,12.6879562987114,13.3597925158342,28.6250789164124,24.9661692215956,18.6798552777407,19.7446659123936,15.2865319276416,11.9383261763192,6.17987419335935,10.8449517689934,9.73071607144862,13.1031148457401,12.1462835153216,13.091631834651,20.5030937339934,12.8823550685081,16.546289838263,16.0937944781413,28.8754450059268,33.5945529356308,27.7013095019281,18.2744580073884,23.7900313465686,27.2669944084916,15.2965401769203,20.4572365864264,18.4931359658008,17.6842976743856,12.6280811174392,13.1871388846699,12.8888606801174,10.5220927943237,24.8530046058764,24.1397209655147,22.147641966058,17.1803492332715,14.5598108183842,17.5515796790244,17.7096259417887,17.3331258395141,25.0058871802097,16.6413350547681,14.4279921814438,22.1387689751851,15.2925987074079,10.447564995665,10.2891068203972,27.6657630877706,50.5593494865529,40.1462735098956,31.5421484329108,15.9486844852336,17.5894544985822,16.9258337773354,11.8372367792605,14.3637889175605,15.1181770629631,15.5797742982773,15.0233104783787,12.6106569756543,14.1521470925593,14.1184019108022,12.5656654796076,16.5205985790626,15.8076083009556,16.7758023450465,16.1923260394378,23.4622516224768,2.31293148088659,16.3959351331397,21.3288250535234,23.6881405297647,19.4589866596361,16.1346819698674,16.9007313322101,12.5548913234289,14.2358718463353,11.8583247401288,15.5827829456167,12.1363447945102,12.2827374885046,12.5834717211591,11.8875927431082,10.7536287557358,27.5018456381968,24.6776787237014,11.270773567308,18.9395734896142,17.6496763322539,14.0271639780637,11.6355228308633,10.4803205065518,8.94892748695836,8.76119863844784,17.4907049981418,28.1968228660199,27.125141325622,26.084005036643,18.2574109249653,18.3294641411837,17.0599320693551,11.2201493605816,17.5106044917038,14.2771934857802,14.3768206527355,8.93138274404408,9.98520553966594,10.6083128737787,11.4814344654024,12.5435315554475,11.8242041706627,27.0972718831793,18.740972290833,19.0114496068211,16.6630076284836,12.3954630506944,9.52174563544055,10.3420833364633,11.0344600874334,12.6234873099802,10.8429242687091,14.0922450655535,13.4694285855399,9.9807850421243,15.0791283939272,13.053736411649,25.0799779239708,11.8652800911035,17.5000143086693,12.7760738385501,16.8852993737976,10.6037789425837,17.3529520678941,15.6175497718655,14.2179442503647,17.6836910484888,17.6010952525091,15.286132662597,13.7635638569464,17.2430956167674,14.6256477840214,17.6726724031994,11.639086987078,18.5188227813945,14.4969393824683,13.857490329693,5.30980553359851,29.1336763385978,32.9532677091579,23.3870298897314,25.986566573508,16.2940628410282,21.7079766261306,14.9048829085777,21.3898427030833,28.4433082142234,20.0295356292498,21.6584640821192,11.234506989875,21.4272701897259,21.7322588755028,20.5763553630329,11.5271151867478,13.7343989553594,14.6448628335888,15.22324745573,16.192347856396,8.26145076368899,17.201215048287,15.9939665353236,9.36493674836252,13.0879047094098,19.8158091045207,15.9216672752709,15.7399651780119,12.7943458387252,18.4540551261681,17.3364969089107,21.1121761201471,19.9670564424972,17.6335553760122,20.132479242174,21.4172821792258,24.7714070612875,22.5265957301211,13.3653886522116,20.561839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| |||
|short_description=p1@Rrp9 | |||
}} |
Latest revision as of 02:59, 26 September 2015
Short description: | p1@Rrp9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rrp9_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 0bp_to_ENSMUST00000125630, ENSMUST00000127400, NM_145620, uc009rkb.1_5end |
EntrezGene: | Rrp9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 7.76e-15 | 97 |
motile cell | 1.94e-14 | 54 |
hematopoietic cell | 5.55e-14 | 32 |
hematopoietic oligopotent progenitor cell | 5.55e-14 | 32 |
hematopoietic stem cell | 5.55e-14 | 32 |
hematopoietic multipotent progenitor cell | 5.55e-14 | 32 |
somatic stem cell | 1.12e-12 | 91 |
multi fate stem cell | 1.12e-12 | 91 |
connective tissue cell | 1.12e-11 | 46 |
mesenchymal cell | 1.12e-11 | 46 |
hematopoietic lineage restricted progenitor cell | 2.76e-11 | 25 |
lymphoid lineage restricted progenitor cell | 9.33e-09 | 12 |
lymphocyte | 1.32e-08 | 13 |
common lymphoid progenitor | 1.32e-08 | 13 |
T cell | 3.41e-08 | 11 |
pro-T cell | 3.41e-08 | 11 |
leukocyte | 1.63e-07 | 17 |
nongranular leukocyte | 1.63e-07 | 17 |
ectodermal cell | 3.46e-07 | 44 |
neurectodermal cell | 3.46e-07 | 44 |
mature alpha-beta T cell | 3.53e-07 | 9 |
alpha-beta T cell | 3.53e-07 | 9 |
immature T cell | 3.53e-07 | 9 |
mature T cell | 3.53e-07 | 9 |
immature alpha-beta T cell | 3.53e-07 | 9 |
neural cell | 4.65e-07 | 43 |
common myeloid progenitor | 6.91e-07 | 19 |
CNS neuron (sensu Vertebrata) | 9.79e-07 | 23 |
neuroblast (sensu Vertebrata) | 9.79e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.12e-11 | 46 |
hematopoietic system | 4.22e-10 | 45 |
blood island | 4.22e-10 | 45 |
hemolymphoid system | 1.84e-09 | 48 |
immune system | 1.84e-09 | 48 |
gray matter | 5.59e-08 | 34 |
segment of respiratory tract | 3.28e-07 | 27 |
brain grey matter | 6.71e-07 | 29 |
regional part of telencephalon | 6.71e-07 | 29 |
telencephalon | 6.71e-07 | 29 |