FFCP PHASE1:Mm9::chr4:109963489..109963518,-: Difference between revisions
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{{FFCP|EntrezGene=15572|HGNC=|MCL_coexpression_id=1|UniProt=A2A9S1|association_with_transcript=0bp_to_ENSMUST00000142722_5end|description=CAGE_peak_5_at_Elavl4_5end|id=chr4:109963489..109963518,-|ontology_enrichment_celltype=CL:0000540!5.14e-18!33;CL:0000047!5.14e-18!33;CL:0000031!5.14e-18!33;CL:0000404!5.14e-18!33;CL:0000393!4.09e-13!39;CL:0000211!4.09e-13!39;CL:0000117!1.31e-12!23;CL:0000337!1.31e-12!23;CL:0000221!1.34e-12!44;CL:0000133!1.34e-12!44;CL:0002319!5.01e-12!43;CL:0000055!1.46e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,3.57e-20,33;CL:0000047,3.57e-20,33;CL:0000031,3.57e-20,33;CL:0000404,3.57e-20,33;CL:0000393,6.91e-16,39;CL:0000211,6.91e-16,39;CL:0000221,1.42e-14,44;CL:0000133,1.42e-14,44;CL:0002319,1.03e-13,43;CL:0000117,7.66e-13,23;CL:0000337,7.66e-13,23;CL:0000107,1.32e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.08e-30!75;UBERON:0001016!1.08e-30!75;UBERON:0001017!1.79e-30!73;UBERON:0005743!1.79e-30!73;UBERON:0004121!2.08e-28!102;UBERON:0000924!2.08e-28!102;UBERON:0006601!2.08e-28!102;UBERON:0002346!3.72e-27!71;UBERON:0003075!3.72e-27!71;UBERON:0007284!3.72e-27!71;UBERON:0000033!6.62e-23!63;UBERON:0001049!2.86e-22!52;UBERON:0005068!2.86e-22!52;UBERON:0006241!2.86e-22!52;UBERON:0007135!2.86e-22!52;UBERON:0000955!1.22e-20!50;UBERON:0006238!1.22e-20!50;UBERON:0002616!5.40e-20!49;UBERON:0003056!2.23e-18!49;UBERON:0002020!9.33e-17!34;UBERON:0003080!4.43e-16!40;UBERON:0002780!2.73e-15!39;UBERON:0001890!2.73e-15!39;UBERON:0006240!2.73e-15!39;UBERON:0002791!5.35e-13!29;UBERON:0003528!5.35e-13!29;UBERON:0001893!5.35e-13!29;UBERON:0007811!4.42e-11!86;UBERON:0002021!9.40e-09!10;UBERON:0000411!9.40e-09!10;UBERON:0001950!9.40e-09!10;UBERON:0000153!1.47e-08!94;UBERON:0000956!2.67e-08!21;UBERON:0001869!2.67e-08!21;UBERON:0000203!2.67e-08!21;UBERON:0002619!6.31e-07!17;UBERON:0003076!6.68e-07!12;UBERON:0003057!6.68e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.28e-38,73;UBERON:0001016,5.96e-37,75;UBERON:0004121,2.64e-31,95;UBERON:0000924,2.64e-31,95;UBERON:0006601,2.64e-31,95;UBERON:0000073,2.61e-27,54;UBERON:0002346,3.39e-26,64;UBERON:0003075,3.39e-26,64;UBERON:0007284,3.39e-26,64;UBERON:0001049,8.91e-25,52;UBERON:0005068,8.91e-25,52;UBERON:0006241,8.91e-25,52;UBERON:0007135,8.91e-25,52;UBERON:0010371,3.03e-24,73;UBERON:0002020,3.26e-19,34;UBERON:0000955,7.21e-19,47;UBERON:0006238,7.21e-19,47;UBERON:0002616,6.02e-18,46;UBERON:0010314,1.39e-17,92;UBERON:0003080,9.70e-15,40;UBERON:0003056,8.66e-14,49;UBERON:0002021,9.56e-14,10;UBERON:0000411,9.56e-14,10;UBERON:0001950,9.56e-14,10;UBERON:0002780,1.18e-13,39;UBERON:0001890,1.18e-13,39;UBERON:0006240,1.18e-13,39;UBERON:0003528,1.55e-13,29;UBERON:0002791,1.55e-13,29;UBERON:0001893,1.55e-13,29;UBERON:0003076,1.49e-11,12;UBERON:0003057,1.49e-11,12;UBERON:0002240,3.67e-09,6;UBERON:0005174,3.67e-09,6;UBERON:0001137,3.67e-09,6;UBERON:0002619,2.06e-08,17;UBERON:0001948,6.87e-08,5;UBERON:0002315,6.87e-08,5;UBERON:0000956,9.17e-08,21;UBERON:0001869,9.17e-08,21;UBERON:0000203,9.17e-08,21;UBERON:0002420,1.08e-07,8;UBERON:0007245,1.08e-07,8;UBERON:0010009,1.08e-07,8;UBERON:0010011,1.08e-07,8;UBERON:0000454,1.08e-07,8;UBERON:0002410,1.32e-07,9;UBERON:0011216,3.07e-07,194|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,3.1739458756322,1.90149421051854,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0.841299845405528,4.28476476605705,3.53389665522582,0.734944795289724,0.383381884072945,0,6.60695285996332,4.85211884723713,5.68344173048101,0.923204014111357,2.74462930807229,5.73004707612436,5.58365998002762,3.93933827022176,2.44477196442896,5.59794312399969,5.83723891276322,6.33758115806022,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.702222100658759,0,0,0,2.67602497575693,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.693941307064543,0.304465478312141,0.691846491768175,0.150722640552623,1.05829836422134,0,0,0.144599356919912,0,0,0.220841518460394,0,0,4.39171195517321,4.39838084308256,0,0,0,0,5.99162557619291,2.74500361691176,1.25654352112864,7.82209440865244,4.09144731728529,5.81806524766768,4.38051410282946,0,0,0,0.210441855886474,0.130120442962704,1.60931473103431,1.0803727788321,0.753524089178575,0.816437989815934,1.0249097622788,0.374806898238915,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,2.3131894342054,0.823236899034275,0,0,0.426576501070468,0,1.67527699718721,0.80673409849337,0.22237804384487,0.760902504450237,0,0.823494773620054,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54587772942622,6.09500770279457,0,0,1.57754109708128,2.34263246577983,3.87762115919038,0.716906393857656,1.78238939265915,1.13230612315533,2.42886421004937,2.92255857911312,1.58115111178609,2.57057053137446,0,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0.363533729477506,0.356497378384721,1.26414703174326,0,0,0.340439605753788,0.18006109403131,0,0.428674070063185,0.709360934569094,1.42695054081656,1.97458824722545,0.608929898229199,0,0,0,0,0,0,0,0,0,5.56275906031529,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,1.01659733563424,0.86404272657441,0.836353184057875,0.655087691238533,0.404593039154462,0.495920734352016,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,4.60325236507177,5.15605962095457,2.40594455281163,4.11049511862385,5.2877572817279,7.42524750254986,4.05289082901798,6.34399372577886,5.69536342927002,1.14166082342594,1.99512436700516,1.53660245178721,0.972426868273176,1.25767897576789,0.183843508450014,0.44449345560323,0.412070114477788,0.64183841918363,1.51618327058278,0.50695859978048,0.943131706930381,1.31098110457835,0.89635213366817,1.20614484806788,0.952587382566147,1.0429589335037,0.578727661391115,0.824171801606613,1.03039244094078,0.685738504770831,0.354951612318675,0.715308569841963,0.726732083161643,1.2234219453993,1.09998990259179,0.365855945745545,0.526139422875686,0.543216455383447,0.561142271657738,0.237270036248348,0.492522411877817,0.818462086339379,0.77468420592983,0.771626443924566,0.999242311751784,1.63752125911786,0.644613162144895,1.3390183244819,0.441182838239031,0.463735671240843|short_description=p5@Elavl4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15572 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=A2A9S1 | |||
|association_with_transcript=0bp_to_ENSMUST00000142722_5end | |||
|cluster_id=chr4:109963489..109963518,- | |||
|description=CAGE_peak_5_at_Elavl4_5end | |||
|id=chr4:109963489..109963518,- | |||
|ontology_enrichment_celltype=CL:0000540!5.14e-18!33;CL:0000047!5.14e-18!33;CL:0000031!5.14e-18!33;CL:0000404!5.14e-18!33;CL:0000393!4.09e-13!39;CL:0000211!4.09e-13!39;CL:0000117!1.31e-12!23;CL:0000337!1.31e-12!23;CL:0000221!1.34e-12!44;CL:0000133!1.34e-12!44;CL:0002319!5.01e-12!43;CL:0000055!1.46e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.57e-20,33;CL:0000047,3.57e-20,33;CL:0000031,3.57e-20,33;CL:0000404,3.57e-20,33;CL:0000393,6.91e-16,39;CL:0000211,6.91e-16,39;CL:0000221,1.42e-14,44;CL:0000133,1.42e-14,44;CL:0002319,1.03e-13,43;CL:0000117,7.66e-13,23;CL:0000337,7.66e-13,23;CL:0000107,1.32e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.08e-30!75;UBERON:0001016!1.08e-30!75;UBERON:0001017!1.79e-30!73;UBERON:0005743!1.79e-30!73;UBERON:0004121!2.08e-28!102;UBERON:0000924!2.08e-28!102;UBERON:0006601!2.08e-28!102;UBERON:0002346!3.72e-27!71;UBERON:0003075!3.72e-27!71;UBERON:0007284!3.72e-27!71;UBERON:0000033!6.62e-23!63;UBERON:0001049!2.86e-22!52;UBERON:0005068!2.86e-22!52;UBERON:0006241!2.86e-22!52;UBERON:0007135!2.86e-22!52;UBERON:0000955!1.22e-20!50;UBERON:0006238!1.22e-20!50;UBERON:0002616!5.40e-20!49;UBERON:0003056!2.23e-18!49;UBERON:0002020!9.33e-17!34;UBERON:0003080!4.43e-16!40;UBERON:0002780!2.73e-15!39;UBERON:0001890!2.73e-15!39;UBERON:0006240!2.73e-15!39;UBERON:0002791!5.35e-13!29;UBERON:0003528!5.35e-13!29;UBERON:0001893!5.35e-13!29;UBERON:0007811!4.42e-11!86;UBERON:0002021!9.40e-09!10;UBERON:0000411!9.40e-09!10;UBERON:0001950!9.40e-09!10;UBERON:0000153!1.47e-08!94;UBERON:0000956!2.67e-08!21;UBERON:0001869!2.67e-08!21;UBERON:0000203!2.67e-08!21;UBERON:0002619!6.31e-07!17;UBERON:0003076!6.68e-07!12;UBERON:0003057!6.68e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.28e-38,73;UBERON:0001016,5.96e-37,75;UBERON:0004121,2.64e-31,95;UBERON:0000924,2.64e-31,95;UBERON:0006601,2.64e-31,95;UBERON:0000073,2.61e-27,54;UBERON:0002346,3.39e-26,64;UBERON:0003075,3.39e-26,64;UBERON:0007284,3.39e-26,64;UBERON:0001049,8.91e-25,52;UBERON:0005068,8.91e-25,52;UBERON:0006241,8.91e-25,52;UBERON:0007135,8.91e-25,52;UBERON:0010371,3.03e-24,73;UBERON:0002020,3.26e-19,34;UBERON:0000955,7.21e-19,47;UBERON:0006238,7.21e-19,47;UBERON:0002616,6.02e-18,46;UBERON:0010314,1.39e-17,92;UBERON:0003080,9.70e-15,40;UBERON:0003056,8.66e-14,49;UBERON:0002021,9.56e-14,10;UBERON:0000411,9.56e-14,10;UBERON:0001950,9.56e-14,10;UBERON:0002780,1.18e-13,39;UBERON:0001890,1.18e-13,39;UBERON:0006240,1.18e-13,39;UBERON:0003528,1.55e-13,29;UBERON:0002791,1.55e-13,29;UBERON:0001893,1.55e-13,29;UBERON:0003076,1.49e-11,12;UBERON:0003057,1.49e-11,12;UBERON:0002240,3.67e-09,6;UBERON:0005174,3.67e-09,6;UBERON:0001137,3.67e-09,6;UBERON:0002619,2.06e-08,17;UBERON:0001948,6.87e-08,5;UBERON:0002315,6.87e-08,5;UBERON:0000956,9.17e-08,21;UBERON:0001869,9.17e-08,21;UBERON:0000203,9.17e-08,21;UBERON:0002420,1.08e-07,8;UBERON:0007245,1.08e-07,8;UBERON:0010009,1.08e-07,8;UBERON:0010011,1.08e-07,8;UBERON:0000454,1.08e-07,8;UBERON:0002410,1.32e-07,9;UBERON:0011216,3.07e-07,194 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,3.1739458756322,1.90149421051854,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0.841299845405528,4.28476476605705,3.53389665522582,0.734944795289724,0.383381884072945,0,6.60695285996332,4.85211884723713,5.68344173048101,0.923204014111357,2.74462930807229,5.73004707612436,5.58365998002762,3.93933827022176,2.44477196442896,5.59794312399969,5.83723891276322,6.33758115806022,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.702222100658759,0,0,0,2.67602497575693,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.693941307064543,0.304465478312141,0.691846491768175,0.150722640552623,1.05829836422134,0,0,0.144599356919912,0,0,0.220841518460394,0,0,4.39171195517321,4.39838084308256,0,0,0,0,5.99162557619291,2.74500361691176,1.25654352112864,7.82209440865244,4.09144731728529,5.81806524766768,4.38051410282946,0,0,0,0.210441855886474,0.130120442962704,1.60931473103431,1.0803727788321,0.753524089178575,0.816437989815934,1.0249097622788,0.374806898238915,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,2.3131894342054,0.823236899034275,0,0,0.426576501070468,0,1.67527699718721,0.80673409849337,0.22237804384487,0.760902504450237,0,0.823494773620054,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54587772942622,6.09500770279457,0,0,1.57754109708128,2.34263246577983,3.87762115919038,0.716906393857656,1.78238939265915,1.13230612315533,2.42886421004937,2.92255857911312,1.58115111178609,2.57057053137446,0,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0.363533729477506,0.356497378384721,1.26414703174326,0,0,0.340439605753788,0.18006109403131,0,0.428674070063185,0.709360934569094,1.42695054081656,1.97458824722545,0.608929898229199,0,0,0,0,0,0,0,0,0,5.56275906031529,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,1.01659733563424,0.86404272657441,0.836353184057875,0.655087691238533,0.404593039154462,0.495920734352016,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,4.60325236507177,5.15605962095457,2.40594455281163,4.11049511862385,5.2877572817279,7.42524750254986,4.05289082901798,6.34399372577886,5.69536342927002,1.14166082342594,1.99512436700516,1.53660245178721,0.972426868273176,1.25767897576789,0.183843508450014,0.44449345560323,0.412070114477788,0.64183841918363,1.51618327058278,0.50695859978048,0.943131706930381,1.31098110457835,0.89635213366817,1.20614484806788,0.952587382566147,1.0429589335037,0.578727661391115,0.824171801606613,1.03039244094078,0.685738504770831,0.354951612318675,0.715308569841963,0.726732083161643,1.2234219453993,1.09998990259179,0.365855945745545,0.526139422875686,0.543216455383447,0.561142271657738,0.237270036248348,0.492522411877817,0.818462086339379,0.77468420592983,0.771626443924566,0.999242311751784,1.63752125911786,0.644613162144895,1.3390183244819,0.441182838239031,0.463735671240843 | |||
|short_description=p5@Elavl4 | |||
}} |
Latest revision as of 03:54, 26 September 2015
Short description: | p5@Elavl4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Elavl4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000142722_5end |
EntrezGene: | Elavl4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.57e-20 | 33 |
neuronal stem cell | 3.57e-20 | 33 |
neuroblast | 3.57e-20 | 33 |
electrically signaling cell | 3.57e-20 | 33 |
electrically responsive cell | 6.91e-16 | 39 |
electrically active cell | 6.91e-16 | 39 |
ectodermal cell | 1.42e-14 | 44 |
neurectodermal cell | 1.42e-14 | 44 |
neural cell | 1.03e-13 | 43 |
CNS neuron (sensu Vertebrata) | 7.66e-13 | 23 |
neuroblast (sensu Vertebrata) | 7.66e-13 | 23 |
autonomic neuron | 1.32e-07 | 9 |