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FFCP PHASE1:Mm9::chr5:72049197..72049228,-: Difference between revisions

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(Created page with "{{FFCP |id=chr5:72049197..72049228,- |short_description=p2@Gabra4 |description=CAGE_peak_2_at_Gabra4_5end |association_with_transcript=318bp_to_ENSMUST00000031121,ENSMUST0...")
 
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{{FFCP
{{FFCP
|id=chr5:72049197..72049228,-
|DHSsupport=NA
|short_description=p2@Gabra4
|DPIdataset=NA
|description=CAGE_peak_2_at_Gabra4_5end
|association_with_transcript=318bp_to_ENSMUST00000031121,ENSMUST00000167392,NM_010251,uc008xqy.1,uc008xqz.1,uc008xra.1_5end
|EntrezGene=14397
|EntrezGene=14397
|HGNC=
|HGNC=
|MCL_coexpression_id=414
|TSSclassifier=NA
|UniProt=Q9D6F4,E9PXT0,Q543Z0,Q3USX9
|UniProt=Q9D6F4,E9PXT0,Q543Z0,Q3USX9
|association_with_transcript=318bp_to_ENSMUST00000031121,ENSMUST00000167392,NM_010251,uc008xqy.1,uc008xqz.1,uc008xra.1_5end
|cluster_id=chr5:72049197..72049228,-
|description=CAGE_peak_2_at_Gabra4_5end
|id=chr5:72049197..72049228,-
|ontology_enrichment_celltype=CL:0000117!4.53e-09!23;CL:0000337!4.53e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.62e-09,23;CL:0000337,5.62e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!5.58e-19!52;UBERON:0005068!5.58e-19!52;UBERON:0006241!5.58e-19!52;UBERON:0007135!5.58e-19!52;UBERON:0000033!1.18e-18!63;UBERON:0001017!1.75e-18!73;UBERON:0005743!1.75e-18!73;UBERON:0000955!1.91e-18!50;UBERON:0006238!1.91e-18!50;UBERON:0002616!8.62e-18!49;UBERON:0000073!2.73e-17!75;UBERON:0001016!2.73e-17!75;UBERON:0002346!8.06e-17!71;UBERON:0003075!8.06e-17!71;UBERON:0007284!8.06e-17!71;UBERON:0002020!1.75e-16!34;UBERON:0003080!6.51e-15!40;UBERON:0003056!9.11e-15!49;UBERON:0002780!2.57e-14!39;UBERON:0001890!2.57e-14!39;UBERON:0006240!2.57e-14!39;UBERON:0004121!4.58e-14!102;UBERON:0000924!4.58e-14!102;UBERON:0006601!4.58e-14!102;UBERON:0002791!1.12e-13!29;UBERON:0003528!1.12e-13!29;UBERON:0001893!1.12e-13!29;UBERON:0000956!1.30e-09!21;UBERON:0001869!1.30e-09!21;UBERON:0000203!1.30e-09!21;UBERON:0002619!5.55e-09!17;UBERON:0002021!1.25e-08!10;UBERON:0000411!1.25e-08!10;UBERON:0001950!1.25e-08!10;UBERON:0000153!1.33e-08!94;UBERON:0007811!1.86e-08!86;UBERON:0001264!3.08e-08!12;UBERON:0003922!3.08e-08!12;UBERON:0002114!3.08e-08!12;UBERON:0003923!3.08e-08!12;UBERON:0003924!3.08e-08!12;UBERON:0003921!3.08e-08!12;UBERON:0002553!9.83e-08!39;UBERON:0003886!2.39e-07!38;UBERON:0001045!3.56e-07!13;UBERON:0002323!5.80e-07!37;UBERON:0004458!5.80e-07!37
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.14e-30,54;UBERON:0001049,7.23e-27,52;UBERON:0005068,7.23e-27,52;UBERON:0006241,7.23e-27,52;UBERON:0007135,7.23e-27,52;UBERON:0002020,1.20e-23,34;UBERON:0001017,2.93e-22,73;UBERON:0000955,9.38e-22,47;UBERON:0006238,9.38e-22,47;UBERON:0001016,2.26e-21,75;UBERON:0002616,1.29e-20,46;UBERON:0002346,6.06e-20,64;UBERON:0003075,6.06e-20,64;UBERON:0007284,6.06e-20,64;UBERON:0003528,2.61e-18,29;UBERON:0002791,2.61e-18,29;UBERON:0001893,2.61e-18,29;UBERON:0003080,6.11e-18,40;UBERON:0002780,6.79e-17,39;UBERON:0001890,6.79e-17,39;UBERON:0006240,6.79e-17,39;UBERON:0010371,2.85e-16,73;UBERON:0002021,6.98e-16,10;UBERON:0000411,6.98e-16,10;UBERON:0001950,6.98e-16,10;UBERON:0004121,1.55e-15,95;UBERON:0000924,1.55e-15,95;UBERON:0006601,1.55e-15,95;UBERON:0003056,2.58e-13,49;UBERON:0001264,3.52e-12,12;UBERON:0002619,5.33e-12,17;UBERON:0010314,9.61e-12,92;UBERON:0000956,9.37e-11,21;UBERON:0001869,9.37e-11,21;UBERON:0000203,9.37e-11,21;UBERON:0003076,1.17e-09,12;UBERON:0003057,1.17e-09,12;UBERON:0002420,2.33e-09,8;UBERON:0007245,2.33e-09,8;UBERON:0010009,2.33e-09,8;UBERON:0010011,2.33e-09,8;UBERON:0000454,2.33e-09,8;UBERON:0000025,5.24e-09,114;UBERON:0002553,1.09e-08,39;UBERON:0004111,2.05e-08,122;UBERON:0003886,4.79e-08,38;UBERON:0002240,7.33e-08,6;UBERON:0005174,7.33e-08,6;UBERON:0001137,7.33e-08,6;UBERON:0002323,2.04e-07,37;UBERON:0004458,2.04e-07,37;UBERON:0001948,8.34e-07,5;UBERON:0002315,8.34e-07,5;UBERON:0002075,8.99e-07,19
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.414758449233911,0.135005938331691,0.420649922702764,1.99955689082663,2.20868540951614,0.489963196859816,0.191690942036473,0.919218786610021,9.91042928994498,12.0026097800076,7.83393319606842,1.18697658957174,1.55528994124096,1.56274011167028,1.67509799400829,1.68828783009504,3.0559649555362,2.06240009831567,3.41692033917847,1.4911955666024,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.470354828542819,0,0,0.144599356919912,0,0.323533699894818,0,0,0,2.04946557908083,3.14170060220183,0.255457055208591,0,0,0,3.59497534571574,7.77751024791665,1.13088916901578,5.04090528557602,8.95004100656157,9.3504620051802,9.73447578406546,1.62942982160506,0.373220911830279,1.26361379216837,0.210441855886474,0.390361328888111,0.459804208866946,0.360124259610698,0,0.204109497453984,0.2562274405697,0.187403449119458,0.517406741478031,0,0.567318240503458,0,0.43839146485515,0.834141747676794,0.348252166522167,0.411564272815887,1.19420560091096,0,0,0,0.621377317606506,1.17263029990548,0.36012412292203,0.710234206755631,0.196764231747404,0.462801338662135,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,6.72927835405207,4.21908910755066,0.330418782983798,0,0.426576501070468,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0.38992817423824,0.898819408654221,0.216138049874694,0,0,0.114248512609729,0,0.407302655690628,0,0.140271639780637,0.252946148497029,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,1.76605648986571,1.64096361229084,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0,0,5.46246237917072,0.283880170416537,1.78065603667255,2.76907830901079,0.164970122972535,15.9294166007955,0.242780636154981,0.604647113929502,5.46954731292105,3.83892460745005,5.84126781093462,4.13485269069154,4.36240475373007,6.77345018930971,8.84902922220285,10.5418608574999,8.25084345985495,1.70219802876894,0.540183282093931,0,0,0,0.535106452806212,0.658196082408484,0.608929898229199,0,0,0,0,0,0.180938774784468,0.119372344003136,0,0,2.03967832211561,0.170870880797853,0.412773735926445,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.324016022465404,0.627264888043406,0,0.404593039154462,0.578574190077352,0,0,1.24267862617385,0,1.49516546043979,1.15820943319968,0.972255941720238,0.387479470433193,0.506868376472335,1.17357238645754,0.5208175393758,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,6.21227026878773,7.82552902062201,9.16632821503035,9.28007184655913,8.22099023724771,7.55393897389701,10.8003600037089,8.10578165803597,6.34399372577886,9.31968561153276,0.103787347584177,1.99512436700516,0.341467211508268,0,0,0.551530525350042,0,0.412070114477788,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.749132059759059,0.576226371643824,0.402048282689293,0.476293691283074,0.463537303779422,0.192909220463705,0,0.735994600671987,1.37147700954166,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.507687647350059,0.73171189149109,0,0.543216455383447,0,0.711810108745045,0.689531376628944,0.409231043169689,0.464810523557898,0,0.749431733813838,0.233931608445408,0.214871054048298,0.191288332068843,0,0
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.414758449233911,0.135005938331691,0.420649922702764,1.99955689082663,2.20868540951614,0.489963196859816,0.191690942036473,0.919218786610021,9.91042928994498,12.0026097800076,7.83393319606842,1.18697658957174,1.55528994124096,1.56274011167028,1.67509799400829,1.68828783009504,3.0559649555362,2.06240009831567,3.41692033917847,1.4911955666024,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.470354828542819,0,0,0.144599356919912,0,0.323533699894818,0,0,0,2.04946557908083,3.14170060220183,0.255457055208591,0,0,0,3.59497534571574,7.77751024791665,1.13088916901578,5.04090528557602,8.95004100656157,9.3504620051802,9.73447578406546,1.62942982160506,0.373220911830279,1.26361379216837,0.210441855886474,0.390361328888111,0.459804208866946,0.360124259610698,0,0.204109497453984,0.2562274405697,0.187403449119458,0.517406741478031,0,0.567318240503458,0,0.43839146485515,0.834141747676794,0.348252166522167,0.411564272815887,1.19420560091096,0,0,0,0.621377317606506,1.17263029990548,0.36012412292203,0.710234206755631,0.196764231747404,0.462801338662135,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,6.72927835405207,4.21908910755066,0.330418782983798,0,0.426576501070468,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0.38992817423824,0.898819408654221,0.216138049874694,0,0,0.114248512609729,0,0.407302655690628,0,0.140271639780637,0.252946148497029,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,1.76605648986571,1.64096361229084,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0,0,5.46246237917072,0.283880170416537,1.78065603667255,2.76907830901079,0.164970122972535,15.9294166007955,0.242780636154981,0.604647113929502,5.46954731292105,3.83892460745005,5.84126781093462,4.13485269069154,4.36240475373007,6.77345018930971,8.84902922220285,10.5418608574999,8.25084345985495,1.70219802876894,0.540183282093931,0,0,0,0.535106452806212,0.658196082408484,0.608929898229199,0,0,0,0,0,0.180938774784468,0.119372344003136,0,0,2.03967832211561,0.170870880797853,0.412773735926445,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.324016022465404,0.627264888043406,0,0.404593039154462,0.578574190077352,0,0,1.24267862617385,0,1.49516546043979,1.15820943319968,0.972255941720238,0.387479470433193,0.506868376472335,1.17357238645754,0.5208175393758,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,6.21227026878773,7.82552902062201,9.16632821503035,9.28007184655913,8.22099023724771,7.55393897389701,10.8003600037089,8.10578165803597,6.34399372577886,9.31968561153276,0.103787347584177,1.99512436700516,0.341467211508268,0,0,0.551530525350042,0,0.412070114477788,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.749132059759059,0.576226371643824,0.402048282689293,0.476293691283074,0.463537303779422,0.192909220463705,0,0.735994600671987,1.37147700954166,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.507687647350059,0.73171189149109,0,0.543216455383447,0,0.711810108745045,0.689531376628944,0.409231043169689,0.464810523557898,0,0.749431733813838,0.233931608445408,0.214871054048298,0.191288332068843,0,0
|short_description=p2@Gabra4
}}
}}

Latest revision as of 04:43, 26 September 2015

Short description:p2@Gabra4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gabra4_5end
Coexpression cluster:MCL_coexpression_mm9:414
Association with transcript: 318bp_to_ENSMUST00000031121, ENSMUST00000167392, NM_010251, uc008xqy.1, uc008xqz.1, uc008xra.1_5end
EntrezGene:Gabra4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gabra4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F29.35
diencephalon, neonate N30.CNhs11201.1388-42B29.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G14.22
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E55.47
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B68.85
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.62e-0923
neuroblast (sensu Vertebrata)5.62e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.14e-3054
neural tube7.23e-2752
neural rod7.23e-2752
future spinal cord7.23e-2752
neural keel7.23e-2752
gray matter1.20e-2334
central nervous system2.93e-2273
brain9.38e-2247
future brain9.38e-2247
nervous system2.26e-2175
regional part of brain1.29e-2046
neurectoderm6.06e-2064
neural plate6.06e-2064
presumptive neural plate6.06e-2064
brain grey matter2.61e-1829
regional part of telencephalon2.61e-1829
telencephalon2.61e-1829
anterior neural tube6.11e-1840
regional part of forebrain6.79e-1739
forebrain6.79e-1739
future forebrain6.79e-1739
ecto-epithelium2.85e-1673
occipital lobe6.98e-1610
visual cortex6.98e-1610
neocortex6.98e-1610
ectoderm-derived structure1.55e-1595
ectoderm1.55e-1595
presumptive ectoderm1.55e-1595
pre-chordal neural plate2.58e-1349
pancreas3.52e-1212
regional part of cerebral cortex5.33e-1217
structure with developmental contribution from neural crest9.61e-1292
cerebral cortex9.37e-1121
cerebral hemisphere9.37e-1121
pallium9.37e-1121
posterior neural tube1.17e-0912
chordal neural plate1.17e-0912
basal ganglion2.33e-098
nuclear complex of neuraxis2.33e-098
aggregate regional part of brain2.33e-098
collection of basal ganglia2.33e-098
cerebral subcortex2.33e-098
tube5.24e-09114
anatomical cavity1.09e-0839
anatomical conduit2.05e-08122
body cavity precursor4.79e-0838
spinal cord7.33e-086
dorsal region element7.33e-086
dorsum7.33e-086
body cavity2.04e-0737
body cavity or lining2.04e-0737
regional part of spinal cord8.34e-075
gray matter of spinal cord8.34e-075
viscus8.99e-0719
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