Personal tools

FFCP PHASE1:Mm9::chr5:84846323..84846334,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr5:84846323..84846334,- |short_description=p3@Epha5 |description=CAGE_peak_3_at_Epha5_5end |association_with_transcript=49bp_to_ENSMUST00000113401_5end |Entr...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:84846323..84846334,-
|DHSsupport=NA
|short_description=p3@Epha5
|DPIdataset=NA
|description=CAGE_peak_3_at_Epha5_5end
|association_with_transcript=49bp_to_ENSMUST00000113401_5end
|EntrezGene=13839
|EntrezGene=13839
|HGNC=
|HGNC=
|MCL_coexpression_id=1791
|TSSclassifier=NA
|UniProt=Q6PFV6
|UniProt=Q6PFV6
|association_with_transcript=49bp_to_ENSMUST00000113401_5end
|cluster_id=chr5:84846323..84846334,-
|description=CAGE_peak_3_at_Epha5_5end
|id=chr5:84846323..84846334,-
|ontology_enrichment_celltype=CL:0000117!1.93e-17!23;CL:0000337!1.93e-17!23;CL:0000540!1.16e-15!33;CL:0000047!1.16e-15!33;CL:0000031!1.16e-15!33;CL:0000404!1.16e-15!33;CL:0000221!5.95e-13!44;CL:0000133!5.95e-13!44;CL:0002319!1.05e-12!43;CL:0000393!1.94e-11!39;CL:0000211!1.94e-11!39;CL:0000055!3.15e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.65e-23,23;CL:0000337,3.65e-23,23;CL:0000540,1.13e-15,33;CL:0000047,1.13e-15,33;CL:0000031,1.13e-15,33;CL:0000404,1.13e-15,33;CL:0000393,2.62e-12,39;CL:0000211,2.62e-12,39;CL:0002319,8.41e-12,43;CL:0000221,2.17e-11,44;CL:0000133,2.17e-11,44;CL:0002609,4.53e-10,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!7.51e-34!63;UBERON:0004121!1.18e-31!102;UBERON:0000924!1.18e-31!102;UBERON:0006601!1.18e-31!102;UBERON:0002346!6.45e-31!71;UBERON:0003075!6.45e-31!71;UBERON:0007284!6.45e-31!71;UBERON:0003056!2.51e-30!49;UBERON:0001017!6.07e-30!73;UBERON:0005743!6.07e-30!73;UBERON:0000073!6.43e-30!75;UBERON:0001016!6.43e-30!75;UBERON:0000955!1.34e-26!50;UBERON:0006238!1.34e-26!50;UBERON:0001049!1.71e-26!52;UBERON:0005068!1.71e-26!52;UBERON:0006241!1.71e-26!52;UBERON:0007135!1.71e-26!52;UBERON:0002616!1.27e-25!49;UBERON:0003080!3.39e-23!40;UBERON:0002020!3.81e-23!34;UBERON:0002780!1.59e-22!39;UBERON:0001890!1.59e-22!39;UBERON:0006240!1.59e-22!39;UBERON:0002791!3.41e-20!29;UBERON:0003528!3.41e-20!29;UBERON:0001893!3.41e-20!29;UBERON:0007811!1.16e-19!86;UBERON:0000153!6.87e-19!94;UBERON:0000956!3.00e-15!21;UBERON:0001869!3.00e-15!21;UBERON:0000203!3.00e-15!21;UBERON:0002619!5.88e-12!17;UBERON:0000020!3.42e-08!12;UBERON:0001032!3.42e-08!12;UBERON:0004456!3.42e-08!12;UBERON:0000970!8.88e-08!9;UBERON:0000019!8.88e-08!9;UBERON:0000047!8.88e-08!9;UBERON:0004088!8.88e-08!9;UBERON:0002104!8.88e-08!9;UBERON:0001456!8.88e-08!9;UBERON:0003072!8.88e-08!9;UBERON:0003071!8.88e-08!9;UBERON:0004128!8.88e-08!9;UBERON:0002021!9.06e-08!10;UBERON:0000411!9.06e-08!10;UBERON:0001950!9.06e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0003056,4.66e-38,49;UBERON:0002346,2.37e-35,64;UBERON:0003075,2.37e-35,64;UBERON:0007284,2.37e-35,64;UBERON:0004121,2.33e-33,95;UBERON:0000924,2.33e-33,95;UBERON:0006601,2.33e-33,95;UBERON:0000073,6.14e-33,54;UBERON:0001016,6.75e-30,75;UBERON:0010371,1.93e-29,73;UBERON:0001017,2.05e-29,73;UBERON:0002020,1.72e-28,34;UBERON:0000955,3.35e-28,47;UBERON:0006238,3.35e-28,47;UBERON:0003080,3.77e-28,40;UBERON:0001049,5.90e-28,52;UBERON:0005068,5.90e-28,52;UBERON:0006241,5.90e-28,52;UBERON:0007135,5.90e-28,52;UBERON:0003528,4.51e-27,29;UBERON:0002791,4.51e-27,29;UBERON:0001893,4.51e-27,29;UBERON:0002780,4.65e-27,39;UBERON:0001890,4.65e-27,39;UBERON:0006240,4.65e-27,39;UBERON:0002616,9.78e-27,46;UBERON:0010314,8.67e-21,92;UBERON:0000956,2.91e-20,21;UBERON:0001869,2.91e-20,21;UBERON:0000203,2.91e-20,21;UBERON:0002619,7.97e-15,17;UBERON:0002021,1.26e-10,10;UBERON:0000411,1.26e-10,10;UBERON:0001950,1.26e-10,10;UBERON:0000970,2.11e-10,9;UBERON:0000019,2.11e-10,9;UBERON:0000047,2.11e-10,9;UBERON:0010312,2.11e-10,9;UBERON:0004088,2.11e-10,9;UBERON:0002104,2.11e-10,9;UBERON:0001456,2.11e-10,9;UBERON:0003072,2.11e-10,9;UBERON:0004128,2.11e-10,9;UBERON:0003071,2.11e-10,9;UBERON:0001444,3.53e-08,11;UBERON:0002420,7.39e-08,8;UBERON:0007245,7.39e-08,8;UBERON:0010009,7.39e-08,8;UBERON:0010011,7.39e-08,8;UBERON:0000454,7.39e-08,8;UBERON:0000025,2.24e-07,114;UBERON:0000020,2.38e-07,12;UBERON:0001032,2.38e-07,12;UBERON:0004456,2.38e-07,12
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,6.97214543856797,0,0,0,0,0,0.299600110518405,0,6.32506635081714,4.3201900266141,7.57169860864975,0.856952953211411,0.662605622854841,5.87955836231779,2.58782771749238,11.9498442259303,7.70811166995721,5.2351808614927,4.76180253094355,2.90149833006426,1.9212405156506,0.52091337055676,3.90856198601933,2.8138130501584,3.36156145108982,3.83017161115768,3.98640706237488,2.23679334990361,0,2.41828992341714,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.608930956624282,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,2.39665023047716,2.28750301409313,2.26177833803156,3.12883776346098,3.06858548796397,2.90903262383384,3.73154905055843,0,0,0,0.631325567659422,2.73252930221678,3.90833577536904,5.40186389416048,5.57607825992146,5.71506592871154,5.63700369253339,5.34099829990454,1.29351685369508,0,0.378212160335639,0,0,0.278047249225598,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,4.32199371992995,0,0,0.426576501070468,0,0,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,1.9266070798535,1.87538698547525,0,0,0,0,0.861693590931196,0.716906393857656,0.668396022247182,0.566153061577665,0,1.16902343164525,0,8.67567554338879,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,1.36175842301515,1.62054984628179,0.129358683782755,0.857348140126369,0.177340233642274,1.07021290561242,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,4.60325236507177,2.86447756719698,4.98374228796694,3.42541259885321,4.5323633843382,1.35004500046361,0.45032120322422,2.71885445390523,3.62432218226274,0.518936737920883,0.798049746802062,1.36586884603307,0.729320151204882,0.838452650511929,0.919217542250071,1.11123363900808,1.44224540067226,1.60459604795908,1.01078884705519,0.50695859978048,0.565879024158229,0.561849044819294,0.640251524048693,0.918967503289812,0,0.927074607558844,0,1.64834360321323,1.17759136107518,0.685738504770831,0.177475806159338,1.1921809497366,0.581385666529314,0.658765662907314,1.18460451048347,1.28049581010941,0.263069711437843,0.543216455383447,1.12228454331548,0.711810108745045,0.29551344712669,0,0.309873682371932,0.771626443924566,1.24905288968973,0.701794825336225,0.429742108096597,0.57386499620653,0,0
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,6.97214543856797,0,0,0,0,0,0.299600110518405,0,6.32506635081714,4.3201900266141,7.57169860864975,0.856952953211411,0.662605622854841,5.87955836231779,2.58782771749238,11.9498442259303,7.70811166995721,5.2351808614927,4.76180253094355,2.90149833006426,1.9212405156506,0.52091337055676,3.90856198601933,2.8138130501584,3.36156145108982,3.83017161115768,3.98640706237488,2.23679334990361,0,2.41828992341714,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.608930956624282,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,2.39665023047716,2.28750301409313,2.26177833803156,3.12883776346098,3.06858548796397,2.90903262383384,3.73154905055843,0,0,0,0.631325567659422,2.73252930221678,3.90833577536904,5.40186389416048,5.57607825992146,5.71506592871154,5.63700369253339,5.34099829990454,1.29351685369508,0,0.378212160335639,0,0,0.278047249225598,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,4.32199371992995,0,0,0.426576501070468,0,0,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,1.9266070798535,1.87538698547525,0,0,0,0,0.861693590931196,0.716906393857656,0.668396022247182,0.566153061577665,0,1.16902343164525,0,8.67567554338879,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,1.36175842301515,1.62054984628179,0.129358683782755,0.857348140126369,0.177340233642274,1.07021290561242,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,4.60325236507177,2.86447756719698,4.98374228796694,3.42541259885321,4.5323633843382,1.35004500046361,0.45032120322422,2.71885445390523,3.62432218226274,0.518936737920883,0.798049746802062,1.36586884603307,0.729320151204882,0.838452650511929,0.919217542250071,1.11123363900808,1.44224540067226,1.60459604795908,1.01078884705519,0.50695859978048,0.565879024158229,0.561849044819294,0.640251524048693,0.918967503289812,0,0.927074607558844,0,1.64834360321323,1.17759136107518,0.685738504770831,0.177475806159338,1.1921809497366,0.581385666529314,0.658765662907314,1.18460451048347,1.28049581010941,0.263069711437843,0.543216455383447,1.12228454331548,0.711810108745045,0.29551344712669,0,0.309873682371932,0.771626443924566,1.24905288968973,0.701794825336225,0.429742108096597,0.57386499620653,0,0
|short_description=p3@Epha5
}}
}}

Latest revision as of 06:17, 26 September 2015

Short description:p3@Epha5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Epha5_5end
Coexpression cluster:MCL_coexpression_mm9:1791
Association with transcript: 49bp_to_ENSMUST00000113401_5end
EntrezGene:Epha5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Epha5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F92.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B23.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D45.58
eyeball, neonate N00.CNhs11207.633-15C65.72
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G85.34
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate4.66e-3849
neurectoderm2.37e-3564
neural plate2.37e-3564
presumptive neural plate2.37e-3564
ectoderm-derived structure2.33e-3395
ectoderm2.33e-3395
presumptive ectoderm2.33e-3395
regional part of nervous system6.14e-3354
nervous system6.75e-3075
ecto-epithelium1.93e-2973
central nervous system2.05e-2973
gray matter1.72e-2834
brain3.35e-2847
future brain3.35e-2847
anterior neural tube3.77e-2840
neural tube5.90e-2852
neural rod5.90e-2852
future spinal cord5.90e-2852
neural keel5.90e-2852
brain grey matter4.51e-2729
regional part of telencephalon4.51e-2729
telencephalon4.51e-2729
regional part of forebrain4.65e-2739
forebrain4.65e-2739
future forebrain4.65e-2739
regional part of brain9.78e-2746
structure with developmental contribution from neural crest8.67e-2192
cerebral cortex2.91e-2021
cerebral hemisphere2.91e-2021
pallium2.91e-2021
regional part of cerebral cortex7.97e-1517
occipital lobe1.26e-1010
visual cortex1.26e-1010
neocortex1.26e-1010
eye2.11e-109
camera-type eye2.11e-109
simple eye2.11e-109
immature eye2.11e-109
ocular region2.11e-109
visual system2.11e-109
face2.11e-109
optic cup2.11e-109
optic vesicle2.11e-109
eye primordium2.11e-109
subdivision of head3.53e-0811
basal ganglion7.39e-088
nuclear complex of neuraxis7.39e-088
aggregate regional part of brain7.39e-088
collection of basal ganglia7.39e-088
cerebral subcortex7.39e-088
tube2.24e-07114
sense organ2.38e-0712
sensory system2.38e-0712
entire sense organ system2.38e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:84846323..84846334,-&oldid=4237782"