FFCP PHASE1:Mm9::chr2:177876625..177876644,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74189 | |EntrezGene=74189 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BYK5,A2AHM6 | |UniProt=Q8BYK5,A2AHM6 | ||
|association_with_transcript=0bp_to_ENSMUST00000103066,NM_028806,uc008ohk.2_5end | |association_with_transcript=0bp_to_ENSMUST00000103066,NM_028806,uc008ohk.2_5end | ||
|cluster_id=chr2:177876625..177876644,+ | |||
|description=CAGE_peak_1_at_Phactr3_5end | |description=CAGE_peak_1_at_Phactr3_5end | ||
|id=chr2:177876625..177876644,+ | |id=chr2:177876625..177876644,+ | ||
|ontology_enrichment_celltype=CL:0000540!6.25e-18!33;CL:0000047!6.25e-18!33;CL:0000031!6.25e-18!33;CL:0000404!6.25e-18!33;CL:0000117!9.30e-16!23;CL:0000337!9.30e-16!23;CL:0000393!5.90e-13!39;CL:0000211!5.90e-13!39;CL:0002319!1.37e-12!43;CL:0000221!1.52e-12!44;CL:0000133!1.52e-12!44;CL:0000055!6.41e-09!50 | |ontology_enrichment_celltype=CL:0000540!6.25e-18!33;CL:0000047!6.25e-18!33;CL:0000031!6.25e-18!33;CL:0000404!6.25e-18!33;CL:0000117!9.30e-16!23;CL:0000337!9.30e-16!23;CL:0000393!5.90e-13!39;CL:0000211!5.90e-13!39;CL:0002319!1.37e-12!43;CL:0000221!1.52e-12!44;CL:0000133!1.52e-12!44;CL:0000055!6.41e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.63e-20,33;CL:0000047,2.63e-20,33;CL:0000031,2.63e-20,33;CL:0000404,2.63e-20,33;CL:0000117,3.27e-20,23;CL:0000337,3.27e-20,23;CL:0000393,1.49e-15,39;CL:0000211,1.49e-15,39;CL:0002319,3.69e-13,43;CL:0000221,1.24e-12,44;CL:0000133,1.24e-12,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.27e-33!73;UBERON:0005743!1.27e-33!73;UBERON:0002346!2.78e-32!71;UBERON:0003075!2.78e-32!71;UBERON:0007284!2.78e-32!71;UBERON:0000073!6.75e-32!75;UBERON:0001016!6.75e-32!75;UBERON:0004121!5.05e-30!102;UBERON:0000924!5.05e-30!102;UBERON:0006601!5.05e-30!102;UBERON:0000033!1.23e-26!63;UBERON:0001049!2.06e-26!52;UBERON:0005068!2.06e-26!52;UBERON:0006241!2.06e-26!52;UBERON:0007135!2.06e-26!52;UBERON:0000955!1.35e-25!50;UBERON:0006238!1.35e-25!50;UBERON:0002616!9.14e-25!49;UBERON:0003056!1.60e-23!49;UBERON:0002020!2.71e-21!34;UBERON:0003080!9.89e-21!40;UBERON:0002780!4.85e-20!39;UBERON:0001890!4.85e-20!39;UBERON:0006240!4.85e-20!39;UBERON:0002791!3.01e-18!29;UBERON:0003528!3.01e-18!29;UBERON:0001893!3.01e-18!29;UBERON:0007811!5.28e-14!86;UBERON:0000956!6.44e-13!21;UBERON:0001869!6.44e-13!21;UBERON:0000203!6.44e-13!21;UBERON:0000153!5.14e-12!94;UBERON:0002619!2.73e-10!17;UBERON:0002021!1.69e-09!10;UBERON:0000411!1.69e-09!10;UBERON:0001950!1.69e-09!10 | |ontology_enrichment_uberon=UBERON:0001017!1.27e-33!73;UBERON:0005743!1.27e-33!73;UBERON:0002346!2.78e-32!71;UBERON:0003075!2.78e-32!71;UBERON:0007284!2.78e-32!71;UBERON:0000073!6.75e-32!75;UBERON:0001016!6.75e-32!75;UBERON:0004121!5.05e-30!102;UBERON:0000924!5.05e-30!102;UBERON:0006601!5.05e-30!102;UBERON:0000033!1.23e-26!63;UBERON:0001049!2.06e-26!52;UBERON:0005068!2.06e-26!52;UBERON:0006241!2.06e-26!52;UBERON:0007135!2.06e-26!52;UBERON:0000955!1.35e-25!50;UBERON:0006238!1.35e-25!50;UBERON:0002616!9.14e-25!49;UBERON:0003056!1.60e-23!49;UBERON:0002020!2.71e-21!34;UBERON:0003080!9.89e-21!40;UBERON:0002780!4.85e-20!39;UBERON:0001890!4.85e-20!39;UBERON:0006240!4.85e-20!39;UBERON:0002791!3.01e-18!29;UBERON:0003528!3.01e-18!29;UBERON:0001893!3.01e-18!29;UBERON:0007811!5.28e-14!86;UBERON:0000956!6.44e-13!21;UBERON:0001869!6.44e-13!21;UBERON:0000203!6.44e-13!21;UBERON:0000153!5.14e-12!94;UBERON:0002619!2.73e-10!17;UBERON:0002021!1.69e-09!10;UBERON:0000411!1.69e-09!10;UBERON:0001950!1.69e-09!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.98e-32,73;UBERON:0001016,5.01e-31,75;UBERON:0002346,5.03e-31,64;UBERON:0003075,5.03e-31,64;UBERON:0007284,5.03e-31,64;UBERON:0000073,4.92e-29,54;UBERON:0002020,4.52e-28,34;UBERON:0004121,2.38e-27,95;UBERON:0000924,2.38e-27,95;UBERON:0006601,2.38e-27,95;UBERON:0001049,5.11e-27,52;UBERON:0005068,5.11e-27,52;UBERON:0006241,5.11e-27,52;UBERON:0007135,5.11e-27,52;UBERON:0010371,6.29e-25,73;UBERON:0003528,4.69e-24,29;UBERON:0002791,4.69e-24,29;UBERON:0001893,4.69e-24,29;UBERON:0000955,4.18e-23,47;UBERON:0006238,4.18e-23,47;UBERON:0003056,2.95e-22,49;UBERON:0002616,4.06e-22,46;UBERON:0003080,2.65e-20,40;UBERON:0002780,1.88e-19,39;UBERON:0001890,1.88e-19,39;UBERON:0006240,1.88e-19,39;UBERON:0010314,2.41e-18,92;UBERON:0000956,5.05e-17,21;UBERON:0001869,5.05e-17,21;UBERON:0000203,5.05e-17,21;UBERON:0002619,1.47e-13,17;UBERON:0002021,5.47e-12,10;UBERON:0000411,5.47e-12,10;UBERON:0001950,5.47e-12,10;UBERON:0002420,3.89e-08,8;UBERON:0007245,3.89e-08,8;UBERON:0010009,3.89e-08,8;UBERON:0010011,3.89e-08,8;UBERON:0000454,3.89e-08,8;UBERON:0003076,3.35e-07,12;UBERON:0003057,3.35e-07,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90902598404949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,15.1737345644698,23.2756030879694,15.8457850876545,0,0,0,0,0,0.898800331555214,0.384218305321555,13.5833392124106,19.5758610580951,14.5124223332454,14.8538511889978,16.3442720304194,16.6587486932338,14.2809751817172,22.9804696652505,37.4393995397922,19.1531007127782,22.8873734551803,18.2003077067668,14.5465353327831,17.7110545989298,15.0758819460746,19.1339287410771,24.90611438762,12.6690291753677,11.8168495063255,14.911955666024,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.79928715803342,0,0.29688427812965,0.867426633830679,1.21786191324856,1.61430848079241,0.753613202763113,1.17588707135705,0.251333182659351,0,0.144599356919912,0,0,0,0,0,8.19786231632332,16.127396424636,0.255457055208591,0,0,0,18.1246673679835,48.0375632959558,13.9476330845279,62.9244039096041,57.0245469846637,25.1423533917068,42.0204871345492,0,0,0,1.26265113531884,0.260240885925407,0.689706313300419,1.26043490863744,4.52114453507145,2.31324097114515,3.20284300712124,2.99845518591132,4.39795730256327,0.431135985865684,0.756424320671277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.4695876553905,13.5834088340655,0,0,0.213288250535234,0.232236671860439,0.902072229254653,0.80673409849337,0.667134131534611,0.570676878337677,0,0.329397909448022,0.251335208800269,0.596869416123452,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,21.9954308283275,29.3029216480508,0,0,2.52406575533005,2.73307121007647,4.95473814785438,0.238968797952552,0.668396022247182,1.69845918473299,2.02405350837447,5.84511715822624,3.16230222357219,37.9159153377732,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.517434735131018,0.428674070063185,0.532020700926821,0.178368817602071,1.15184314421485,0.913394847343798,0,0,0.441056796109924,0,0,0,0,0,0,18.913380805072,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.756037385752609,0.209088296014469,0.436725127492355,0.404593039154462,0.0826534557253359,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,44.6153955667483,48.7944750697608,56.7166558305003,99.3311393946514,48.6408589037156,36.2589070747056,60.0770025206307,35.5753750547134,51.2050922152151,53.8470724221893,1.764384908931,1.99512436700516,3.41467211508268,2.43106717068294,3.77303692730368,2.38996560985018,4.66718128383392,4.12070114477788,0.962757628775446,1.76888048234658,2.78827229879264,3.39527414494937,3.37109426891577,3.13723246783859,3.27382173046996,1.90517476513229,2.66533949673168,2.31491064556446,2.06042950401653,2.20798380201596,2.05721551431249,3.72699192934609,4.05341522910446,3.92435324907287,3.85848459702856,3.38458431566706,4.93905526756486,1.8414879800649,5.02475221229689,3.36685362994643,2.96587545310435,2.06859412988683,2.45538625901814,3.40861050609125,2.3148793317737,7.49431733813838,1.16965804222704,1.93383948643468,0.191288332068843,0.220591419119515,0.695603506861264 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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90902598404949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,15.1737345644698,23.2756030879694,15.8457850876545,0,0,0,0,0,0.898800331555214,0.384218305321555,13.5833392124106,19.5758610580951,14.5124223332454,14.8538511889978,16.3442720304194,16.6587486932338,14.2809751817172,22.9804696652505,37.4393995397922,19.1531007127782,22.8873734551803,18.2003077067668,14.5465353327831,17.7110545989298,15.0758819460746,19.1339287410771,24.90611438762,12.6690291753677,11.8168495063255,14.911955666024,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.79928715803342,0,0.29688427812965,0.867426633830679,1.21786191324856,1.61430848079241,0.753613202763113,1.17588707135705,0.251333182659351,0,0.144599356919912,0,0,0,0,0,8.19786231632332,16.127396424636,0.255457055208591,0,0,0,18.1246673679835,48.0375632959558,13.9476330845279,62.9244039096041,57.0245469846637,25.1423533917068,42.0204871345492,0,0,0,1.26265113531884,0.260240885925407,0.689706313300419,1.26043490863744,4.52114453507145,2.31324097114515,3.20284300712124,2.99845518591132,4.39795730256327,0.431135985865684,0.756424320671277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.4695876553905,13.5834088340655,0,0,0.213288250535234,0.232236671860439,0.902072229254653,0.80673409849337,0.667134131534611,0.570676878337677,0,0.329397909448022,0.251335208800269,0.596869416123452,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,21.9954308283275,29.3029216480508,0,0,2.52406575533005,2.73307121007647,4.95473814785438,0.238968797952552,0.668396022247182,1.69845918473299,2.02405350837447,5.84511715822624,3.16230222357219,37.9159153377732,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.517434735131018,0.428674070063185,0.532020700926821,0.178368817602071,1.15184314421485,0.913394847343798,0,0,0.441056796109924,0,0,0,0,0,0,18.913380805072,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.756037385752609,0.209088296014469,0.436725127492355,0.404593039154462,0.0826534557253359,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,44.6153955667483,48.7944750697608,56.7166558305003,99.3311393946514,48.6408589037156,36.2589070747056,60.0770025206307,35.5753750547134,51.2050922152151,53.8470724221893,1.764384908931,1.99512436700516,3.41467211508268,2.43106717068294,3.77303692730368,2.38996560985018,4.66718128383392,4.12070114477788,0.962757628775446,1.76888048234658,2.78827229879264,3.39527414494937,3.37109426891577,3.13723246783859,3.27382173046996,1.90517476513229,2.66533949673168,2.31491064556446,2.06042950401653,2.20798380201596,2.05721551431249,3.72699192934609,4.05341522910446,3.92435324907287,3.85848459702856,3.38458431566706,4.93905526756486,1.8414879800649,5.02475221229689,3.36685362994643,2.96587545310435,2.06859412988683,2.45538625901814,3.40861050609125,2.3148793317737,7.49431733813838,1.16965804222704,1.93383948643468,0.191288332068843,0.220591419119515,0.695603506861264 | ||
|short_description=p1@Phactr3 | |short_description=p1@Phactr3 | ||
}} | }} |
Latest revision as of 07:01, 26 September 2015
Short description: | p1@Phactr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Phactr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000103066, NM_028806, uc008ohk.2_5end |
EntrezGene: | Phactr3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.63e-20 | 33 |
neuronal stem cell | 2.63e-20 | 33 |
neuroblast | 2.63e-20 | 33 |
electrically signaling cell | 2.63e-20 | 33 |
CNS neuron (sensu Vertebrata) | 3.27e-20 | 23 |
neuroblast (sensu Vertebrata) | 3.27e-20 | 23 |
electrically responsive cell | 1.49e-15 | 39 |
electrically active cell | 1.49e-15 | 39 |
neural cell | 3.69e-13 | 43 |
ectodermal cell | 1.24e-12 | 44 |
neurectodermal cell | 1.24e-12 | 44 |