FFCP PHASE1:Mm9::chr2:179777420..179777432,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269397 | |EntrezGene=269397 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BW22 | |UniProt=Q8BW22 | ||
|association_with_transcript=206bp_to_ENSMUST00000041126_5end | |association_with_transcript=206bp_to_ENSMUST00000041126_5end | ||
|cluster_id=chr2:179777420..179777432,+ | |||
|description=CAGE_peak_3_at_Ss18l1_5end | |description=CAGE_peak_3_at_Ss18l1_5end | ||
|id=chr2:179777420..179777432,+ | |id=chr2:179777420..179777432,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.43e-15!23;CL:0000337!1.43e-15!23;CL:0000540!2.83e-13!33;CL:0000047!2.83e-13!33;CL:0000031!2.83e-13!33;CL:0000404!2.83e-13!33;CL:0000393!5.93e-10!39;CL:0000211!5.93e-10!39;CL:0002319!7.98e-10!43;CL:0000221!1.81e-09!44;CL:0000133!1.81e-09!44;CL:0000055!4.50e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.43e-15!23;CL:0000337!1.43e-15!23;CL:0000540!2.83e-13!33;CL:0000047!2.83e-13!33;CL:0000031!2.83e-13!33;CL:0000404!2.83e-13!33;CL:0000393!5.93e-10!39;CL:0000211!5.93e-10!39;CL:0002319!7.98e-10!43;CL:0000221!1.81e-09!44;CL:0000133!1.81e-09!44;CL:0000055!4.50e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.89e-24,23;CL:0000337,5.89e-24,23;CL:0000540,3.69e-16,33;CL:0000047,3.69e-16,33;CL:0000031,3.69e-16,33;CL:0000404,3.69e-16,33;CL:0002319,3.06e-12,43;CL:0000393,3.08e-12,39;CL:0000211,3.08e-12,39;CL:0000221,9.56e-12,44;CL:0000133,9.56e-12,44;CL:0002609,7.20e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.44e-22!71;UBERON:0003075!5.44e-22!71;UBERON:0007284!5.44e-22!71;UBERON:0001017!2.50e-21!73;UBERON:0005743!2.50e-21!73;UBERON:0000073!6.19e-21!75;UBERON:0001016!6.19e-21!75;UBERON:0001049!8.39e-20!52;UBERON:0005068!8.39e-20!52;UBERON:0006241!8.39e-20!52;UBERON:0007135!8.39e-20!52;UBERON:0004121!5.29e-19!102;UBERON:0000924!5.29e-19!102;UBERON:0006601!5.29e-19!102;UBERON:0000955!4.27e-18!50;UBERON:0006238!4.27e-18!50;UBERON:0002616!6.22e-18!49;UBERON:0000033!6.59e-18!63;UBERON:0003056!5.41e-17!49;UBERON:0002020!1.98e-16!34;UBERON:0003080!2.57e-15!40;UBERON:0002780!7.77e-15!39;UBERON:0001890!7.77e-15!39;UBERON:0006240!7.77e-15!39;UBERON:0002791!2.55e-13!29;UBERON:0003528!2.55e-13!29;UBERON:0001893!2.55e-13!29;UBERON:0000153!2.59e-11!94;UBERON:0007811!8.37e-11!86;UBERON:0000956!1.31e-08!21;UBERON:0001869!1.31e-08!21;UBERON:0000203!1.31e-08!21 | |ontology_enrichment_uberon=UBERON:0002346!5.44e-22!71;UBERON:0003075!5.44e-22!71;UBERON:0007284!5.44e-22!71;UBERON:0001017!2.50e-21!73;UBERON:0005743!2.50e-21!73;UBERON:0000073!6.19e-21!75;UBERON:0001016!6.19e-21!75;UBERON:0001049!8.39e-20!52;UBERON:0005068!8.39e-20!52;UBERON:0006241!8.39e-20!52;UBERON:0007135!8.39e-20!52;UBERON:0004121!5.29e-19!102;UBERON:0000924!5.29e-19!102;UBERON:0006601!5.29e-19!102;UBERON:0000955!4.27e-18!50;UBERON:0006238!4.27e-18!50;UBERON:0002616!6.22e-18!49;UBERON:0000033!6.59e-18!63;UBERON:0003056!5.41e-17!49;UBERON:0002020!1.98e-16!34;UBERON:0003080!2.57e-15!40;UBERON:0002780!7.77e-15!39;UBERON:0001890!7.77e-15!39;UBERON:0006240!7.77e-15!39;UBERON:0002791!2.55e-13!29;UBERON:0003528!2.55e-13!29;UBERON:0001893!2.55e-13!29;UBERON:0000153!2.59e-11!94;UBERON:0007811!8.37e-11!86;UBERON:0000956!1.31e-08!21;UBERON:0001869!1.31e-08!21;UBERON:0000203!1.31e-08!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.51e-28,54;UBERON:0001049,5.15e-26,52;UBERON:0005068,5.15e-26,52;UBERON:0006241,5.15e-26,52;UBERON:0007135,5.15e-26,52;UBERON:0002346,3.72e-25,64;UBERON:0003075,3.72e-25,64;UBERON:0007284,3.72e-25,64;UBERON:0001017,5.57e-25,73;UBERON:0002020,4.80e-24,34;UBERON:0001016,7.87e-24,75;UBERON:0010371,5.79e-21,73;UBERON:0002616,1.27e-20,46;UBERON:0004121,1.86e-20,95;UBERON:0000924,1.86e-20,95;UBERON:0006601,1.86e-20,95;UBERON:0000955,6.63e-20,47;UBERON:0006238,6.63e-20,47;UBERON:0003056,1.86e-19,49;UBERON:0003528,4.01e-19,29;UBERON:0002791,4.01e-19,29;UBERON:0001893,4.01e-19,29;UBERON:0003080,2.52e-18,40;UBERON:0002780,1.34e-17,39;UBERON:0001890,1.34e-17,39;UBERON:0006240,1.34e-17,39;UBERON:0010314,4.09e-16,92;UBERON:0000956,1.00e-11,21;UBERON:0001869,1.00e-11,21;UBERON:0000203,1.00e-11,21;UBERON:0002420,5.40e-09,8;UBERON:0007245,5.40e-09,8;UBERON:0010009,5.40e-09,8;UBERON:0010011,5.40e-09,8;UBERON:0000454,5.40e-09,8;UBERON:0003076,2.78e-08,12;UBERON:0003057,2.78e-08,12;UBERON:0002619,5.07e-08,17;UBERON:0000025,2.67e-07,114;UBERON:0004111,6.60e-07,122 | |||
|phase1_expression=1.28119077683835,0,0,0,0.500895729946347,0,0,0,0.140788722151667,0,0.34243593645101,0,0,0,0,0.404950534779652,0.699561878128147,0,0,0.42438965179803,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.405507724878058,0,1.56478268869608,0,0,0.58328969722285,0.139986421625363,1.43752564364972,0.167782606057736,0,0.336093799142464,0.514518872071894,0.573066879877513,0,8.6996078169627,7.40587370980846,10.775133859605,0.677689064138264,0.889294796111139,0,0,0,0,0.384218305321555,8.29516898467821,11.4755047581937,10.7265730289205,5.14171771926846,4.63823935998388,8.32937434661688,10.0637744569148,11.0306254393203,5.50579404996943,1.78762273319263,2.61131106535614,9.75958529203434,11.5274430939036,9.37644067002168,4.18774498502071,1.68828783009504,2.44477196442896,7.07108605136802,4.6982654663704,6.71038004971082,0.454357159999104,0.453429360640713,0.289864488701678,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0.35333957451034,0.281686839553361,1.28326477414318,0,0,0.432982082022428,0.506719730950197,0,0.34255163915718,0.776813650941515,0.742210695324124,1.04091196059682,0.608930956624282,0.691846491768175,0.60289056221049,1.05829836422134,0.502666365318702,0.247194967734374,0,0.884610551949874,0.323533699894818,0.220841518460394,0,0,1.46390398505774,1.25668024088073,0.510914110417183,0.239630249011841,0,0.127070227073065,1.9472783122627,4.11750542536764,12.3141265070607,5.21472960576829,4.34716277461562,2.0778804455956,3.0825839982874,0.611036183101898,0.248813941220186,1.51633655060205,1.26265113531884,0.910843100738926,0.689706313300419,2.16074555766419,1.35634336052144,1.42876648217788,1.40925092313335,1.3118241438362,0.258703370739016,1.07783996466421,0.378212160335639,0.879755620819744,1.09597866213787,0.834141747676794,0.348252166522167,0.411564272815887,1.19420560091096,0,0.257347907114715,0,0.207125772535502,0.938104239924385,0,0.473489471170421,0.590292695242212,0.617068451549513,1.39520366850245,0.536546802799238,0.583826711835847,0.329119699826961,0.820837320395476,0.56748166682099,1.02339991197733,0.219550115291051,0.268412837520744,2.3131894342054,10.7020796874456,0,0,0.426576501070468,0.464473343720877,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.379335801906163,0.571242563048644,0,0.610953983535943,0.387904974335251,0.98190147846446,0.822074982615345,0.738050739898011,0.470996183524124,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0.486405680325106,0.274561413188081,0,0.372140947668503,1.24815069245824,0.252578877947112,0.358794827043824,0,0.184753190166605,1.32643988239339,0.651859905768103,0.339490171550376,0.469380496577004,0.502518772325447,0.476087281772027,0.780534591431195,0.472905432318573,1.55025282754142,0.956728611944923,0.163863314715738,0.690739927463582,0.433947175744535,0,0,0,0,1.76605648986571,1.64096361229084,0,0.252470927204373,0.94652465824877,0.390438744296638,0.861693590931196,0.238968797952552,1.11399337041197,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,0.963963949265421,0.567760340833074,0.35613120733451,0.651547837414304,0.494910368917606,1.32745138339963,0.728341908464944,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,1.03135543248187,1.02131881726136,1.26042765821917,0.517434735131018,0.643011105094777,1.24138163549592,0.891844088010353,0.987294123612726,0.608929898229199,0,0.63549621259146,0.882113592219848,0.32977250588296,0.807322133479528,0.361877549568935,0.358117032009409,0.328281799490123,0,1.48340241608408,0,0.412773735926445,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0.813277868507395,0.540026704109006,0.209088296014469,0.218362563746178,0.404593039154462,0.330613822901344,0.26175594198403,0.129614973291793,0,0.56369293868419,0.299033092087958,0.992750942742586,0.777804753376191,0.387479470433193,1.01373675294467,0.469428954583016,0.39061315453185,1.04859344425711,0.483168241652012,0.288030006257865,0.632022241256357,0.405450430580328,0.102710957164827,0.51968329191118,0,0.39736270956253,0.120195449519969,0.590758108698309,0.403865799792591,0.685861259894999,0.302478555410522,0.682205165178267,0.384847366561318,0.584384510907845,0,0,0.0897138566094757,0.167884616364078,1.54551675225752,0.187682475451182,0.36630324853453,0.214368379079066,0,1.12950368523413,4.60325236507177,0.572895513439397,4.1244763762485,2.05524755931193,1.5107877947794,3.37511250115903,1.35096360967266,2.71885445390523,0.51776031175182,0.830298780673413,1.59609949360412,1.53660245178721,0.729320151204882,1.46729213839588,0.183843508450014,1.11123363900808,0.824140228955577,1.60459604795908,1.51618327058278,1.01391719956096,2.45214243801899,0.655490552289177,1.47257850531199,2.23998328926892,2.38146845641537,1.50649623728312,2.70072908649187,2.06042950401653,0.883193520806384,0.685738504770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| ||
|short_description=p3@Ss18l1 | |short_description=p3@Ss18l1 | ||
}} | }} |
Latest revision as of 07:17, 26 September 2015
Short description: | p3@Ss18l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ss18l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 206bp_to_ENSMUST00000041126_5end |
EntrezGene: | Ss18l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.89e-24 | 23 |
neuroblast (sensu Vertebrata) | 5.89e-24 | 23 |
neuron | 3.69e-16 | 33 |
neuronal stem cell | 3.69e-16 | 33 |
neuroblast | 3.69e-16 | 33 |
electrically signaling cell | 3.69e-16 | 33 |
neural cell | 3.06e-12 | 43 |
electrically responsive cell | 3.08e-12 | 39 |
electrically active cell | 3.08e-12 | 39 |
ectodermal cell | 9.56e-12 | 44 |
neurectodermal cell | 9.56e-12 | 44 |
neuron of cerebral cortex | 7.20e-08 | 6 |