FFCP PHASE1:Mm9::chr2:179777433..179777444,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269397 | |EntrezGene=269397 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BW22 | |UniProt=Q8BW22 | ||
|association_with_transcript=219bp_to_ENSMUST00000041126_5end | |association_with_transcript=219bp_to_ENSMUST00000041126_5end | ||
|cluster_id=chr2:179777433..179777444,+ | |||
|description=CAGE_peak_4_at_Ss18l1_5end | |description=CAGE_peak_4_at_Ss18l1_5end | ||
|id=chr2:179777433..179777444,+ | |id=chr2:179777433..179777444,+ | ||
|ontology_enrichment_celltype=CL:0000117!5.77e-15!23;CL:0000337!5.77e-15!23;CL:0000540!2.33e-13!33;CL:0000047!2.33e-13!33;CL:0000031!2.33e-13!33;CL:0000404!2.33e-13!33;CL:0002319!8.71e-11!43;CL:0000393!1.31e-10!39;CL:0000211!1.31e-10!39;CL:0000221!1.47e-10!44;CL:0000133!1.47e-10!44;CL:0000055!2.19e-08!50 | |ontology_enrichment_celltype=CL:0000117!5.77e-15!23;CL:0000337!5.77e-15!23;CL:0000540!2.33e-13!33;CL:0000047!2.33e-13!33;CL:0000031!2.33e-13!33;CL:0000404!2.33e-13!33;CL:0002319!8.71e-11!43;CL:0000393!1.31e-10!39;CL:0000211!1.31e-10!39;CL:0000221!1.47e-10!44;CL:0000133!1.47e-10!44;CL:0000055!2.19e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.15e-38,23;CL:0000337,4.15e-38,23;CL:0000540,1.27e-24,33;CL:0000047,1.27e-24,33;CL:0000031,1.27e-24,33;CL:0000404,1.27e-24,33;CL:0000393,7.22e-20,39;CL:0000211,7.22e-20,39;CL:0002319,4.67e-19,43;CL:0000221,1.77e-18,44;CL:0000133,1.77e-18,44;CL:0002609,1.50e-12,6;CL:0002321,2.61e-09,70;CL:0002613,2.22e-07,3;CL:0000120,4.01e-07,3;CL:0002608,5.02e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.88e-27!73;UBERON:0005743!6.88e-27!73;UBERON:0000073!9.63e-26!75;UBERON:0001016!9.63e-26!75;UBERON:0001049!1.10e-24!52;UBERON:0005068!1.10e-24!52;UBERON:0006241!1.10e-24!52;UBERON:0007135!1.10e-24!52;UBERON:0002346!1.44e-22!71;UBERON:0003075!1.44e-22!71;UBERON:0007284!1.44e-22!71;UBERON:0004121!2.50e-22!102;UBERON:0000924!2.50e-22!102;UBERON:0006601!2.50e-22!102;UBERON:0002020!6.13e-22!34;UBERON:0000955!7.88e-22!50;UBERON:0006238!7.88e-22!50;UBERON:0003056!1.34e-21!49;UBERON:0002616!2.50e-21!49;UBERON:0003080!5.27e-21!40;UBERON:0000033!8.04e-21!63;UBERON:0002780!2.16e-20!39;UBERON:0001890!2.16e-20!39;UBERON:0006240!2.16e-20!39;UBERON:0002791!1.80e-18!29;UBERON:0003528!1.80e-18!29;UBERON:0001893!1.80e-18!29;UBERON:0000956!3.37e-13!21;UBERON:0001869!3.37e-13!21;UBERON:0000203!3.37e-13!21;UBERON:0000153!4.56e-11!94;UBERON:0007811!6.59e-11!86;UBERON:0002619!1.74e-10!17;UBERON:0002021!2.77e-07!10;UBERON:0000411!2.77e-07!10;UBERON:0001950!2.77e-07!10;UBERON:0000025!6.75e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.55e-48,34;UBERON:0000073,2.89e-47,54;UBERON:0001049,4.93e-44,52;UBERON:0005068,4.93e-44,52;UBERON:0006241,4.93e-44,52;UBERON:0007135,4.93e-44,52;UBERON:0001017,3.46e-41,73;UBERON:0001016,8.19e-40,75;UBERON:0003528,3.23e-39,29;UBERON:0002791,3.23e-39,29;UBERON:0001893,3.23e-39,29;UBERON:0002616,1.43e-36,46;UBERON:0000955,1.31e-35,47;UBERON:0006238,1.31e-35,47;UBERON:0003080,1.45e-35,40;UBERON:0002780,4.43e-34,39;UBERON:0001890,4.43e-34,39;UBERON:0006240,4.43e-34,39;UBERON:0002346,5.63e-34,64;UBERON:0003075,5.63e-34,64;UBERON:0007284,5.63e-34,64;UBERON:0004121,3.03e-29,95;UBERON:0000924,3.03e-29,95;UBERON:0006601,3.03e-29,95;UBERON:0010371,1.33e-28,73;UBERON:0000956,2.38e-28,21;UBERON:0001869,2.38e-28,21;UBERON:0000203,2.38e-28,21;UBERON:0003056,1.52e-27,49;UBERON:0002619,2.20e-21,17;UBERON:0010314,1.01e-20,92;UBERON:0002021,1.69e-16,10;UBERON:0000411,1.69e-16,10;UBERON:0001950,1.69e-16,10;UBERON:0000025,6.91e-15,114;UBERON:0004111,2.72e-13,122;UBERON:0002420,1.34e-11,8;UBERON:0007245,1.34e-11,8;UBERON:0010009,1.34e-11,8;UBERON:0010011,1.34e-11,8;UBERON:0000454,1.34e-11,8;UBERON:0001948,8.91e-10,5;UBERON:0002315,8.91e-10,5;UBERON:0011216,5.60e-09,194;UBERON:0003076,1.65e-08,12;UBERON:0003057,1.65e-08,12;UBERON:0002240,4.64e-08,6;UBERON:0005174,4.64e-08,6;UBERON:0001137,4.64e-08,6;UBERON:0002950,2.50e-07,4;UBERON:0001891,2.50e-07,4;UBERON:0009616,2.50e-07,4;UBERON:0010286,2.50e-07,4;UBERON:0000369,2.82e-07,5;UBERON:0002435,2.82e-07,5;UBERON:0000204,2.82e-07,5;UBERON:0010082,2.82e-07,5;UBERON:0001954,9.02e-07,7;UBERON:0003022,9.02e-07,7;UBERON:0002421,9.02e-07,7;UBERON:0000349,9.02e-07,7;UBERON:0002600,9.02e-07,7 | |||
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|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0.174840804837995,0,0,0.699561878128147,0.157731082679119,0.274228867211478,0.42438965179803,0.255129870453209,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0.219686182734472,0.777719596297134,0.139986421625363,0,0,0,0,0.257259436035947,0,0,4.85559506063035,3.70293685490423,10.1413024560989,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,1.15265491596466,4.25127410464758,5.94026128659439,4.20649922702764,3.71346279724945,1.98781686856452,5.14461356702807,5.46319184803947,3.67687514644008,0,2.55374676170375,1.84327839907492,6.59431438650969,6.67859798297591,5.73004707612436,1.3959149950069,2.8138130501584,2.44477196442896,3.24091444021034,3.13217697758026,3.72798891650601,0.151452386666368,0,0,0,0,0,0,0.448026887097336,0.140444420131752,0.170430322578058,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0.445326417194474,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0.251333182659351,0.247194967734374,0,0,0,0.220841518460394,0,0,0.878342391034642,1.46612694769419,0,0,0,0,1.9472783122627,0.915001205637253,3.76963056338593,1.73824320192276,1.53429274398198,1.45451631191692,1.46017136760982,0.101839363850316,0,0.252722758433675,0.841767423545896,0.260240885925407,0,0.720248519221397,0.30140963567143,0.476255494059295,0.512454881139399,0.281105173679186,0.776110112217047,0.215567992932842,0.567318240503458,0.351902248327898,0.219195732427575,0.834141747676794,0.348252166522167,0,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0,0.465067889500816,0,0.350296027101508,0.493679549740441,0.656669856316381,0.243206428637567,0.146199987425332,0,0,1.05144974282064,2.77842453424068,0,0,0.639864751605702,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0,0,0,0,0.44292937929755,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,1.28440471990234,1.52375192569864,0,0,0,0.390438744296638,0.215423397732799,0.477937595905104,0.668396022247182,0.566153061577665,0,0.292255857911312,0.395287777946524,0.963963949265421,0.709700426041343,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0.377210159511796,0,0,0.775284879504663,0,0,0,0,0,1.02131881726136,0.720244376125241,0.517434735131018,0.643011105094777,0.709360934569094,0.713475270408282,0.329098041204242,0,0.23467170806371,0.42366414172764,0.220528398054962,0.32977250588296,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0.370850604021019,0,0.412773735926445,0,0,0,0.228778173206523,0,0,0.138199973804424,0.954670618015114,0.632671987162271,0.406638934253697,0,0.627264888043406,0,0.269728692769641,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0.234714477291508,0.2604087696879,0.209718688851422,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0,0,0.192423683280659,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,3.3885110557024,1.84130094602871,3.43737308063638,1.20297227640581,2.05524755931193,2.2661816921691,2.02506750069542,2.70192721934532,2.26571204492102,2.07104124700728,0.518936737920883,1.99512436700516,0.682934423016537,0.486213434136588,1.04806581313991,0.551530525350042,0.44449345560323,1.44224540067226,0,0.505394423527595,0.25347929989024,0.565879024158229,0.749132059759059,0.512201219238954,0.631790158511746,0,0.347652977834566,0.77163688185482,0.824171801606613,0.294397840268795,0.342869252385415,0.354951612318675,1.43061713968393,0,0.752875043322645,0.423073039458382,0.548783918618318,0.526139422875686,0.407412341537585,1.68342681497322,0.474540072496697,0.197008964751127,0,0.464810523557898,0.771626443924566,0.749431733813838,0.467863216890817,1.07435527024149,0.382576664137687,0,0 | ||
|short_description=p4@Ss18l1 | |short_description=p4@Ss18l1 | ||
}} | }} |
Latest revision as of 07:18, 26 September 2015
Short description: | p4@Ss18l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ss18l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 219bp_to_ENSMUST00000041126_5end |
EntrezGene: | Ss18l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.15e-38 | 23 |
neuroblast (sensu Vertebrata) | 4.15e-38 | 23 |
neuron | 1.27e-24 | 33 |
neuronal stem cell | 1.27e-24 | 33 |
neuroblast | 1.27e-24 | 33 |
electrically signaling cell | 1.27e-24 | 33 |
electrically responsive cell | 7.22e-20 | 39 |
electrically active cell | 7.22e-20 | 39 |
neural cell | 4.67e-19 | 43 |
ectodermal cell | 1.77e-18 | 44 |
neurectodermal cell | 1.77e-18 | 44 |
neuron of cerebral cortex | 1.50e-12 | 6 |
embryonic cell | 2.61e-09 | 70 |
striatum neuron | 2.22e-07 | 3 |
granule cell | 4.01e-07 | 3 |
hippocampal neuron | 5.02e-07 | 3 |