Personal tools

FFCP PHASE1:Mm9::chr10:79076898..79076938,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr10:79076898..79076938,-
|DHSsupport=NA
|short_description=p2@C2cd4c
|DPIdataset=NA
|description=CAGE_peak_2_at_C2cd4c_5end
|association_with_transcript=-128bp_to_NM_001168624,uc007fzc.1_5end
|EntrezGene=237397
|EntrezGene=237397
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q5HZI2
|UniProt=Q5HZI2
|association_with_transcript=-128bp_to_NM_001168624,uc007fzc.1_5end
|cluster_id=chr10:79076898..79076938,-
|description=CAGE_peak_2_at_C2cd4c_5end
|id=chr10:79076898..79076938,-
|ontology_enrichment_celltype=CL:0000117!2.48e-12!23;CL:0000337!2.48e-12!23;CL:0000540!6.88e-11!33;CL:0000047!6.88e-11!33;CL:0000031!6.88e-11!33;CL:0000404!6.88e-11!33;CL:0000393!1.11e-09!39;CL:0000211!1.11e-09!39;CL:0000221!3.77e-08!44;CL:0000133!3.77e-08!44;CL:0002319!3.97e-08!43;CL:0000055!4.18e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-25,23;CL:0000337,1.15e-25,23;CL:0000540,9.38e-17,33;CL:0000047,9.38e-17,33;CL:0000031,9.38e-17,33;CL:0000404,9.38e-17,33;CL:0000393,1.31e-13,39;CL:0000211,1.31e-13,39;CL:0002319,5.30e-12,43;CL:0000221,1.20e-11,44;CL:0000133,1.20e-11,44;CL:0002614,5.12e-09,3;CL:0002613,2.00e-08,3;CL:0002612,2.52e-08,3;CL:0002610,3.17e-08,3;CL:0000120,3.56e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.67e-22!73;UBERON:0005743!2.67e-22!73;UBERON:0000073!1.39e-21!75;UBERON:0001016!1.39e-21!75;UBERON:0004121!2.95e-19!102;UBERON:0000924!2.95e-19!102;UBERON:0006601!2.95e-19!102;UBERON:0001049!8.43e-19!52;UBERON:0005068!8.43e-19!52;UBERON:0006241!8.43e-19!52;UBERON:0007135!8.43e-19!52;UBERON:0002346!3.21e-18!71;UBERON:0003075!3.21e-18!71;UBERON:0007284!3.21e-18!71;UBERON:0000955!1.80e-17!50;UBERON:0006238!1.80e-17!50;UBERON:0002616!7.13e-17!49;UBERON:0000033!4.30e-16!63;UBERON:0002020!4.93e-15!34;UBERON:0003080!2.34e-13!40;UBERON:0003056!8.08e-13!49;UBERON:0002780!1.17e-12!39;UBERON:0001890!1.17e-12!39;UBERON:0006240!1.17e-12!39;UBERON:0002791!1.17e-11!29;UBERON:0003528!1.17e-11!29;UBERON:0001893!1.17e-11!29;UBERON:0002420!1.87e-07!8;UBERON:0007245!1.87e-07!8;UBERON:0010009!1.87e-07!8;UBERON:0010011!1.87e-07!8;UBERON:0000454!1.87e-07!8;UBERON:0007811!7.58e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.73e-37,54;UBERON:0002020,2.02e-32,34;UBERON:0001017,2.56e-32,73;UBERON:0001016,2.78e-31,75;UBERON:0001049,1.23e-30,52;UBERON:0005068,1.23e-30,52;UBERON:0006241,1.23e-30,52;UBERON:0007135,1.23e-30,52;UBERON:0002346,1.07e-25,64;UBERON:0003075,1.07e-25,64;UBERON:0007284,1.07e-25,64;UBERON:0003528,3.25e-25,29;UBERON:0002791,3.25e-25,29;UBERON:0001893,3.25e-25,29;UBERON:0004121,6.04e-25,95;UBERON:0000924,6.04e-25,95;UBERON:0006601,6.04e-25,95;UBERON:0002616,1.23e-24,46;UBERON:0000955,5.32e-24,47;UBERON:0006238,5.32e-24,47;UBERON:0003080,5.78e-24,40;UBERON:0002780,4.23e-22,39;UBERON:0001890,4.23e-22,39;UBERON:0006240,4.23e-22,39;UBERON:0010371,8.94e-22,73;UBERON:0003056,1.46e-20,49;UBERON:0002420,2.89e-20,8;UBERON:0007245,2.89e-20,8;UBERON:0010009,2.89e-20,8;UBERON:0010011,2.89e-20,8;UBERON:0000454,2.89e-20,8;UBERON:0010314,5.19e-16,92;UBERON:0002021,1.29e-15,10;UBERON:0000411,1.29e-15,10;UBERON:0001950,1.29e-15,10;UBERON:0000369,7.47e-13,5;UBERON:0002435,7.47e-13,5;UBERON:0000204,7.47e-13,5;UBERON:0010082,7.47e-13,5;UBERON:0002950,2.16e-11,4;UBERON:0001891,2.16e-11,4;UBERON:0009616,2.16e-11,4;UBERON:0010286,2.16e-11,4;UBERON:0002619,7.80e-11,17;UBERON:0000025,1.02e-10,114;UBERON:0000956,2.28e-10,21;UBERON:0001869,2.28e-10,21;UBERON:0000203,2.28e-10,21;UBERON:0004111,1.27e-09,122;UBERON:0002038,5.12e-09,3;UBERON:0009663,5.12e-09,3;UBERON:0009661,5.12e-09,3;UBERON:0000125,5.12e-09,3;UBERON:0002308,5.12e-09,3;UBERON:0001948,1.53e-08,5;UBERON:0002315,1.53e-08,5;UBERON:0002257,2.52e-08,3;UBERON:0004684,3.17e-08,3;UBERON:0002275,3.17e-08,3;UBERON:0011216,6.13e-08,194;UBERON:0002240,4.08e-07,6;UBERON:0005174,4.08e-07,6;UBERON:0001137,4.08e-07,6;UBERON:0003076,4.55e-07,12;UBERON:0003057,4.55e-07,12
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,3.64169629547276,1.05798195854407,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.405017814995072,0.420649922702764,2.28520787523043,0.883474163806454,0.61245399607477,0.191690942036473,0,3.30347642998166,2.042997409363,1.38245879930619,2.2420668914133,3.29355516968675,1.56274011167028,2.79182999001381,3.93933827022176,2.13917546887534,2.65165726926301,1.70846016958924,2.23679334990361,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.587943535678524,0,0.741584903203122,0.144599356919912,0.884610551949874,0.161766849947409,0,0,0,0.292780797011547,2.09446706813455,0,0,0,0,2.54644086988199,2.74500361691176,1.63350657746724,1.56441888173049,2.81287003063364,1.66230435647648,1.78465389374533,0.203678727700633,0.248813941220186,0,0,0,0.229902104433473,0.360124259610698,0.150704817835715,0.272145996605311,0.2562274405697,1.03071897015702,0,0,0.378212160335639,0,0.657587197282725,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.841159794256509,1.85228302282712,0.330418782983798,0,0,0,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0.469380496577004,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.820481806145422,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0.445597348164788,0,0,0.292255857911312,0,0.963963949265421,0.283880170416537,0,0,0.164970122972535,0,0.242780636154981,0.906970670894253,0.565815239267694,0,0.614870295887855,0,0,0.712994756769443,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0.608929898229199,0.23467170806371,0.42366414172764,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.358117032009409,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0,0.165458490457098,0,0.387479470433193,0.506868376472335,0.821500670520278,0.39061315453185,0.943734099831398,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.0897138566094757,0.167884616364078,0,0,0.183151624267265,0,0,2.25900737046827,0.920650473014354,0,2.06223818812425,2.05524755931193,3.0215755895588,2.70009000092722,3.15224842256954,1.35942722695261,2.07104124700728,0,0,0.512200817262403,0.243106717068294,0.628839487883947,0.735374033800057,0.222246727801615,0.824140228955577,0,0,1.01391719956096,0.565879024158229,0.37456602987953,0.512201219238954,0.229741875822453,0,0.231768651889711,0.38581844092741,0,0,0.685738504770831,0,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.492522411877817,0,0.309873682371932,0.578719832943424,0.999242311751784,0.233931608445408,0.429742108096597,0.382576664137687,0,0
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,3.64169629547276,1.05798195854407,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.405017814995072,0.420649922702764,2.28520787523043,0.883474163806454,0.61245399607477,0.191690942036473,0,3.30347642998166,2.042997409363,1.38245879930619,2.2420668914133,3.29355516968675,1.56274011167028,2.79182999001381,3.93933827022176,2.13917546887534,2.65165726926301,1.70846016958924,2.23679334990361,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.587943535678524,0,0.741584903203122,0.144599356919912,0.884610551949874,0.161766849947409,0,0,0,0.292780797011547,2.09446706813455,0,0,0,0,2.54644086988199,2.74500361691176,1.63350657746724,1.56441888173049,2.81287003063364,1.66230435647648,1.78465389374533,0.203678727700633,0.248813941220186,0,0,0,0.229902104433473,0.360124259610698,0.150704817835715,0.272145996605311,0.2562274405697,1.03071897015702,0,0,0.378212160335639,0,0.657587197282725,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.841159794256509,1.85228302282712,0.330418782983798,0,0,0,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0.469380496577004,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.820481806145422,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0.445597348164788,0,0,0.292255857911312,0,0.963963949265421,0.283880170416537,0,0,0.164970122972535,0,0.242780636154981,0.906970670894253,0.565815239267694,0,0.614870295887855,0,0,0.712994756769443,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0.608929898229199,0.23467170806371,0.42366414172764,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.358117032009409,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0,0.165458490457098,0,0.387479470433193,0.506868376472335,0.821500670520278,0.39061315453185,0.943734099831398,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.0897138566094757,0.167884616364078,0,0,0.183151624267265,0,0,2.25900737046827,0.920650473014354,0,2.06223818812425,2.05524755931193,3.0215755895588,2.70009000092722,3.15224842256954,1.35942722695261,2.07104124700728,0,0,0.512200817262403,0.243106717068294,0.628839487883947,0.735374033800057,0.222246727801615,0.824140228955577,0,0,1.01391719956096,0.565879024158229,0.37456602987953,0.512201219238954,0.229741875822453,0,0.231768651889711,0.38581844092741,0,0,0.685738504770831,0,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.492522411877817,0,0.309873682371932,0.578719832943424,0.999242311751784,0.233931608445408,0.429742108096597,0.382576664137687,0,0
|short_description=p2@C2cd4c
}}
}}

Latest revision as of 08:45, 26 September 2015

Short description:p2@C2cd4c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_C2cd4c_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -128bp_to_NM_001168624, uc007fzc.1_5end
EntrezGene:C2cd4c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@C2cd4c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.73e-3754
gray matter2.02e-3234
central nervous system2.56e-3273
nervous system2.78e-3175
neural tube1.23e-3052
neural rod1.23e-3052
future spinal cord1.23e-3052
neural keel1.23e-3052
neurectoderm1.07e-2564
neural plate1.07e-2564
presumptive neural plate1.07e-2564
brain grey matter3.25e-2529
regional part of telencephalon3.25e-2529
telencephalon3.25e-2529
ectoderm-derived structure6.04e-2595
ectoderm6.04e-2595
presumptive ectoderm6.04e-2595
regional part of brain1.23e-2446
brain5.32e-2447
future brain5.32e-2447
anterior neural tube5.78e-2440
regional part of forebrain4.23e-2239
forebrain4.23e-2239
future forebrain4.23e-2239
ecto-epithelium8.94e-2273
pre-chordal neural plate1.46e-2049
basal ganglion2.89e-208
nuclear complex of neuraxis2.89e-208
aggregate regional part of brain2.89e-208
collection of basal ganglia2.89e-208
cerebral subcortex2.89e-208
structure with developmental contribution from neural crest5.19e-1692
occipital lobe1.29e-1510
visual cortex1.29e-1510
neocortex1.29e-1510
corpus striatum7.47e-135
striatum7.47e-135
ventral part of telencephalon7.47e-135
future corpus striatum7.47e-135
regional part of midbrain2.16e-114
midbrain2.16e-114
presumptive midbrain2.16e-114
midbrain neural tube2.16e-114
regional part of cerebral cortex7.80e-1117
tube1.02e-10114
cerebral cortex2.28e-1021
cerebral hemisphere2.28e-1021
pallium2.28e-1021
anatomical conduit1.27e-09122
substantia nigra5.12e-093
telencephalic nucleus5.12e-093
midbrain nucleus5.12e-093
neural nucleus5.12e-093
nucleus of brain5.12e-093
regional part of spinal cord1.53e-085
gray matter of spinal cord1.53e-085
ventral horn of spinal cord2.52e-083
raphe nuclei3.17e-083
reticular formation3.17e-083
organ system subdivision6.13e-08194
spinal cord4.08e-076
dorsal region element4.08e-076
dorsum4.08e-076
posterior neural tube4.55e-0712
chordal neural plate4.55e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:79076898..79076938,-&oldid=4244088"