FFCP PHASE1:Mm9::chr6:103460920..103460944,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12661 | |EntrezGene=12661 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1203 | |||
|TSSclassifier=NA | |||
|UniProt=E9QMU6,A2RRK1,E9QL95,P70232 | |UniProt=E9QMU6,A2RRK1,E9QL95,P70232 | ||
|association_with_transcript=50bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end | |association_with_transcript=50bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end | ||
|cluster_id=chr6:103460920..103460944,+ | |||
|description=CAGE_peak_4_at_Chl1_5end | |description=CAGE_peak_4_at_Chl1_5end | ||
|id=chr6:103460920..103460944,+ | |id=chr6:103460920..103460944,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.70e-21!33;CL:0000047!2.70e-21!33;CL:0000031!2.70e-21!33;CL:0000404!2.70e-21!33;CL:0000221!2.02e-18!44;CL:0000133!2.02e-18!44;CL:0002319!2.34e-18!43;CL:0000393!6.08e-15!39;CL:0000211!6.08e-15!39;CL:0000117!9.02e-15!23;CL:0000337!9.02e-15!23;CL:0000055!8.32e-13!50;CL:0000107!1.30e-07!9 | |ontology_enrichment_celltype=CL:0000540!2.70e-21!33;CL:0000047!2.70e-21!33;CL:0000031!2.70e-21!33;CL:0000404!2.70e-21!33;CL:0000221!2.02e-18!44;CL:0000133!2.02e-18!44;CL:0002319!2.34e-18!43;CL:0000393!6.08e-15!39;CL:0000211!6.08e-15!39;CL:0000117!9.02e-15!23;CL:0000337!9.02e-15!23;CL:0000055!8.32e-13!50;CL:0000107!1.30e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.60e-27,33;CL:0000047,9.60e-27,33;CL:0000031,9.60e-27,33;CL:0000404,9.60e-27,33;CL:0000221,5.47e-21,44;CL:0000133,5.47e-21,44;CL:0002319,6.84e-21,43;CL:0000393,2.35e-20,39;CL:0000211,2.35e-20,39;CL:0000117,2.07e-18,23;CL:0000337,2.07e-18,23;CL:0000107,2.79e-09,9;CL:0002321,5.35e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.23e-31!75;UBERON:0001016!1.23e-31!75;UBERON:0001017!8.56e-31!73;UBERON:0005743!8.56e-31!73;UBERON:0004121!8.35e-27!102;UBERON:0000924!8.35e-27!102;UBERON:0006601!8.35e-27!102;UBERON:0001049!3.18e-20!52;UBERON:0005068!3.18e-20!52;UBERON:0006241!3.18e-20!52;UBERON:0007135!3.18e-20!52;UBERON:0002020!2.81e-19!34;UBERON:0002346!5.39e-19!71;UBERON:0003075!5.39e-19!71;UBERON:0007284!5.39e-19!71;UBERON:0000955!4.25e-18!50;UBERON:0006238!4.25e-18!50;UBERON:0002616!7.22e-18!49;UBERON:0000033!6.78e-17!63;UBERON:0003080!8.75e-16!40;UBERON:0002791!9.70e-16!29;UBERON:0003528!9.70e-16!29;UBERON:0001893!9.70e-16!29;UBERON:0002780!3.01e-15!39;UBERON:0001890!3.01e-15!39;UBERON:0006240!3.01e-15!39;UBERON:0003056!1.90e-14!49;UBERON:0007811!4.14e-13!86;UBERON:0000153!4.56e-12!94;UBERON:0000956!7.33e-11!21;UBERON:0001869!7.33e-11!21;UBERON:0000203!7.33e-11!21;UBERON:0002619!9.11e-09!17;UBERON:0000010!4.46e-08!11;UBERON:0002410!1.30e-07!9 | |ontology_enrichment_uberon=UBERON:0000073!1.23e-31!75;UBERON:0001016!1.23e-31!75;UBERON:0001017!8.56e-31!73;UBERON:0005743!8.56e-31!73;UBERON:0004121!8.35e-27!102;UBERON:0000924!8.35e-27!102;UBERON:0006601!8.35e-27!102;UBERON:0001049!3.18e-20!52;UBERON:0005068!3.18e-20!52;UBERON:0006241!3.18e-20!52;UBERON:0007135!3.18e-20!52;UBERON:0002020!2.81e-19!34;UBERON:0002346!5.39e-19!71;UBERON:0003075!5.39e-19!71;UBERON:0007284!5.39e-19!71;UBERON:0000955!4.25e-18!50;UBERON:0006238!4.25e-18!50;UBERON:0002616!7.22e-18!49;UBERON:0000033!6.78e-17!63;UBERON:0003080!8.75e-16!40;UBERON:0002791!9.70e-16!29;UBERON:0003528!9.70e-16!29;UBERON:0001893!9.70e-16!29;UBERON:0002780!3.01e-15!39;UBERON:0001890!3.01e-15!39;UBERON:0006240!3.01e-15!39;UBERON:0003056!1.90e-14!49;UBERON:0007811!4.14e-13!86;UBERON:0000153!4.56e-12!94;UBERON:0000956!7.33e-11!21;UBERON:0001869!7.33e-11!21;UBERON:0000203!7.33e-11!21;UBERON:0002619!9.11e-09!17;UBERON:0000010!4.46e-08!11;UBERON:0002410!1.30e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.36e-34,75;UBERON:0001017,5.52e-34,73;UBERON:0004121,8.75e-27,95;UBERON:0000924,8.75e-27,95;UBERON:0006601,8.75e-27,95;UBERON:0000073,1.33e-22,54;UBERON:0002020,2.37e-22,34;UBERON:0001049,3.39e-21,52;UBERON:0005068,3.39e-21,52;UBERON:0006241,3.39e-21,52;UBERON:0007135,3.39e-21,52;UBERON:0002346,3.23e-19,64;UBERON:0003075,3.23e-19,64;UBERON:0007284,3.23e-19,64;UBERON:0003528,6.59e-18,29;UBERON:0002791,6.59e-18,29;UBERON:0001893,6.59e-18,29;UBERON:0010371,1.51e-17,73;UBERON:0000955,1.05e-16,47;UBERON:0006238,1.05e-16,47;UBERON:0002616,2.06e-16,46;UBERON:0003080,3.61e-15,40;UBERON:0002780,1.58e-14,39;UBERON:0001890,1.58e-14,39;UBERON:0006240,1.58e-14,39;UBERON:0000956,8.48e-12,21;UBERON:0001869,8.48e-12,21;UBERON:0000203,8.48e-12,21;UBERON:0003056,1.87e-11,49;UBERON:0010314,2.61e-10,92;UBERON:0002410,2.79e-09,9;UBERON:0002619,3.50e-09,17;UBERON:0000010,6.76e-09,11;UBERON:0002021,6.00e-08,10;UBERON:0000411,6.00e-08,10;UBERON:0001950,6.00e-08,10;UBERON:0002420,1.78e-07,8;UBERON:0007245,1.78e-07,8;UBERON:0010009,1.78e-07,8;UBERON:0010011,1.78e-07,8;UBERON:0000454,1.78e-07,8;UBERON:0011216,8.44e-07,194;UBERON:0003076,8.50e-07,12;UBERON:0003057,8.50e-07,12 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,9.3065571995415,13.7537654610729,13.9442908771359,0.338844532069132,0,0,0,0,2.39680088414724,1.53687322128622,10.4726508431562,4.18518408828241,5.67877395648731,8.85518051651791,10.1599528837742,7.34944795289724,4.02550978276593,4.5960939330501,8.8092704799511,6.51205424234457,4.91540906419979,13.0567424852892,16.1018252740241,15.6274011167028,6.97957497503452,8.4414391504752,8.40390362772456,22.3917724959987,18.6506901846825,11.9295645328192,0.681535739998656,18.0616028655217,0,0,0,0,0,0,0.702222100658759,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0.60289056221049,1.52865319276416,0.251333182659351,0,0,0,0,0,0,0,12.5895742714965,9.21565509979202,0,0,0,0,6.89036941262184,4.57500602818627,11.8115090986093,10.081810571152,4.34716277461562,7.06479351502504,5.67844420737152,0.101839363850316,0.124406970610093,0,0.841767423545896,0,0.229902104433473,0.360124259610698,0.30140963567143,1.29269348387523,1.15302348256365,0.281105173679186,0.517406741478031,0,0,0.527853372491847,0,0.556094498451196,0.348252166522167,1.23469281844766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0,6.9395683026162,22.8448239482011,0,0.528901133327089,0.213288250535234,1.16118335930219,1.03093969057675,0.80673409849337,0.889512175379481,0.570676878337677,0,2.47048432086016,1.00534083520108,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.597423819763102,0,0.114248512609729,0,0,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,5.13761887960934,3.98519734413491,0,0,8.83423014365519,7.02789739733949,13.1408272617007,20.0733790280144,20.0518806674155,32.5538010407157,14.9779959619711,15.1973046113882,18.1832377855401,2.24924921495265,0,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.36012218806262,0.388076051348264,1.28602221018955,0.709360934569094,0.713475270408282,1.48094118541909,0,0.23467170806371,0,0.661585194164886,2.4732937941222,1.61464426695906,0.965006798850494,0.477489376012546,0.328281799490123,0.291480836629851,6.48988557036784,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0.954670618015114,0.316335993581135,2.03319467126849,1.08005340821801,2.50905955217362,1.31017538247707,1.34864346384821,1.48776220305605,1.04702376793612,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,1.58005560314089,0,0.102710957164827,0.129920822977795,0.179026695667481,0.596044064343795,1.44234539423963,1.47689527174577,1.41353029927407,0.914481679859998,1.61321896218945,2.92373642219257,2.21287235772758,2.68816875017609,3.62768613784338,0,0,0,0.965947970160952,0.187682475451182,0.183151624267265,3.42989406526505,0,8.471277639256,8.28585425712918,7.44764167471216,6.53042092906013,4.7955776383945,9.82012066606611,6.07520250208625,4.95353323546643,7.70342095273148,5.69536342927002,0.207574695168353,1.99512436700516,3.24393850932855,2.67417388775123,3.98265008993166,2.75765262675021,3.33370091702423,2.67845574410562,1.92551525755089,2.52697211763797,3.8021894983536,2.64076877940507,3.183811253976,3.52138338226781,4.19278923375977,3.33405583898152,4.75125736373908,3.6652751888104,2.88460130562315,4.85756436443511,1.71434626192708,3.01708870470874,3.57654284920981,3.92435324907287,4.6113596403512,3.21535509988371,3.10977553883713,4.73525480588117,4.07412341537585,3.36685362994643,3.6776855618494,4.0386837773981,3.6830793885272,3.87342102964915,3.85813221962283,6.24526444844865,2.57324769289949,4.29742108096597,1.3390183244819,0.882365676478062,0.927471342481686 | |phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,9.3065571995415,13.7537654610729,13.9442908771359,0.338844532069132,0,0,0,0,2.39680088414724,1.53687322128622,10.4726508431562,4.18518408828241,5.67877395648731,8.85518051651791,10.1599528837742,7.34944795289724,4.02550978276593,4.5960939330501,8.8092704799511,6.51205424234457,4.91540906419979,13.0567424852892,16.1018252740241,15.6274011167028,6.97957497503452,8.4414391504752,8.40390362772456,22.3917724959987,18.6506901846825,11.9295645328192,0.681535739998656,18.0616028655217,0,0,0,0,0,0,0.702222100658759,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0.60289056221049,1.52865319276416,0.251333182659351,0,0,0,0,0,0,0,12.5895742714965,9.21565509979202,0,0,0,0,6.89036941262184,4.57500602818627,11.8115090986093,10.081810571152,4.34716277461562,7.06479351502504,5.67844420737152,0.101839363850316,0.124406970610093,0,0.841767423545896,0,0.229902104433473,0.360124259610698,0.30140963567143,1.29269348387523,1.15302348256365,0.281105173679186,0.517406741478031,0,0,0.527853372491847,0,0.556094498451196,0.348252166522167,1.23469281844766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0,6.9395683026162,22.8448239482011,0,0.528901133327089,0.213288250535234,1.16118335930219,1.03093969057675,0.80673409849337,0.889512175379481,0.570676878337677,0,2.47048432086016,1.00534083520108,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.597423819763102,0,0.114248512609729,0,0,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,5.13761887960934,3.98519734413491,0,0,8.83423014365519,7.02789739733949,13.1408272617007,20.0733790280144,20.0518806674155,32.5538010407157,14.9779959619711,15.1973046113882,18.1832377855401,2.24924921495265,0,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.36012218806262,0.388076051348264,1.28602221018955,0.709360934569094,0.713475270408282,1.48094118541909,0,0.23467170806371,0,0.661585194164886,2.4732937941222,1.61464426695906,0.965006798850494,0.477489376012546,0.328281799490123,0.291480836629851,6.48988557036784,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0.954670618015114,0.316335993581135,2.03319467126849,1.08005340821801,2.50905955217362,1.31017538247707,1.34864346384821,1.48776220305605,1.04702376793612,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,1.58005560314089,0,0.102710957164827,0.129920822977795,0.179026695667481,0.596044064343795,1.44234539423963,1.47689527174577,1.41353029927407,0.914481679859998,1.61321896218945,2.92373642219257,2.21287235772758,2.68816875017609,3.62768613784338,0,0,0,0.965947970160952,0.187682475451182,0.183151624267265,3.42989406526505,0,8.471277639256,8.28585425712918,7.44764167471216,6.53042092906013,4.7955776383945,9.82012066606611,6.07520250208625,4.95353323546643,7.70342095273148,5.69536342927002,0.207574695168353,1.99512436700516,3.24393850932855,2.67417388775123,3.98265008993166,2.75765262675021,3.33370091702423,2.67845574410562,1.92551525755089,2.52697211763797,3.8021894983536,2.64076877940507,3.183811253976,3.52138338226781,4.19278923375977,3.33405583898152,4.75125736373908,3.6652751888104,2.88460130562315,4.85756436443511,1.71434626192708,3.01708870470874,3.57654284920981,3.92435324907287,4.6113596403512,3.21535509988371,3.10977553883713,4.73525480588117,4.07412341537585,3.36685362994643,3.6776855618494,4.0386837773981,3.6830793885272,3.87342102964915,3.85813221962283,6.24526444844865,2.57324769289949,4.29742108096597,1.3390183244819,0.882365676478062,0.927471342481686 | ||
|short_description=p4@Chl1 | |short_description=p4@Chl1 | ||
}} | }} |
Latest revision as of 10:27, 26 September 2015
Short description: | p4@Chl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Chl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1203 |
Association with transcript: | 50bp_to_ENSMUST00000032163, ENSMUST00000066905, ENSMUST00000089225, NM_007697, uc009dcj.1, uc009dck.1_5end |
EntrezGene: | Chl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.60e-27 | 33 |
neuronal stem cell | 9.60e-27 | 33 |
neuroblast | 9.60e-27 | 33 |
electrically signaling cell | 9.60e-27 | 33 |
ectodermal cell | 5.47e-21 | 44 |
neurectodermal cell | 5.47e-21 | 44 |
neural cell | 6.84e-21 | 43 |
electrically responsive cell | 2.35e-20 | 39 |
electrically active cell | 2.35e-20 | 39 |
CNS neuron (sensu Vertebrata) | 2.07e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.07e-18 | 23 |
autonomic neuron | 2.79e-09 | 9 |
embryonic cell | 5.35e-08 | 70 |