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FFCP PHASE1:Mm9::chr1:137482285..137482296,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=215690
|EntrezGene=215690
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc007ctk.1,uc011wsl.1_5end
|association_with_transcript=0bp_to_uc007ctk.1,uc011wsl.1_5end
|cluster_id=chr1:137482285..137482296,-
|description=CAGE_peak_8_at_Nav1_5end
|description=CAGE_peak_8_at_Nav1_5end
|id=chr1:137482285..137482296,-
|id=chr1:137482285..137482296,-
|ontology_enrichment_celltype=CL:0000117!1.24e-15!23;CL:0000337!1.24e-15!23;CL:0000540!1.97e-15!33;CL:0000047!1.97e-15!33;CL:0000031!1.97e-15!33;CL:0000404!1.97e-15!33;CL:0002319!1.39e-13!43;CL:0000221!6.38e-13!44;CL:0000133!6.38e-13!44;CL:0000393!6.09e-11!39;CL:0000211!6.09e-11!39;CL:0000055!1.33e-09!50
|ontology_enrichment_celltype=CL:0000117!1.24e-15!23;CL:0000337!1.24e-15!23;CL:0000540!1.97e-15!33;CL:0000047!1.97e-15!33;CL:0000031!1.97e-15!33;CL:0000404!1.97e-15!33;CL:0002319!1.39e-13!43;CL:0000221!6.38e-13!44;CL:0000133!6.38e-13!44;CL:0000393!6.09e-11!39;CL:0000211!6.09e-11!39;CL:0000055!1.33e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.66e-25,23;CL:0000337,1.66e-25,23;CL:0000540,1.49e-16,33;CL:0000047,1.49e-16,33;CL:0000031,1.49e-16,33;CL:0000404,1.49e-16,33;CL:0002319,2.06e-13,43;CL:0000393,2.14e-13,39;CL:0000211,2.14e-13,39;CL:0000221,5.18e-13,44;CL:0000133,5.18e-13,44;CL:0002612,4.26e-08,3;CL:0002613,9.58e-08,3;CL:0000120,5.28e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.63e-26!75;UBERON:0001016!1.63e-26!75;UBERON:0001017!1.78e-26!73;UBERON:0005743!1.78e-26!73;UBERON:0004121!2.31e-21!102;UBERON:0000924!2.31e-21!102;UBERON:0006601!2.31e-21!102;UBERON:0001049!5.27e-20!52;UBERON:0005068!5.27e-20!52;UBERON:0006241!5.27e-20!52;UBERON:0007135!5.27e-20!52;UBERON:0000955!1.90e-18!50;UBERON:0006238!1.90e-18!50;UBERON:0002616!1.19e-17!49;UBERON:0002020!2.64e-17!34;UBERON:0002346!2.68e-17!71;UBERON:0003075!2.68e-17!71;UBERON:0007284!2.68e-17!71;UBERON:0000033!2.44e-16!63;UBERON:0003080!4.69e-14!40;UBERON:0003056!1.15e-13!49;UBERON:0002791!1.32e-13!29;UBERON:0003528!1.32e-13!29;UBERON:0001893!1.32e-13!29;UBERON:0002780!1.97e-13!39;UBERON:0001890!1.97e-13!39;UBERON:0006240!1.97e-13!39;UBERON:0000956!7.49e-09!21;UBERON:0001869!7.49e-09!21;UBERON:0000203!7.49e-09!21;UBERON:0002619!5.03e-07!17;UBERON:0007811!6.51e-07!86;UBERON:0000153!6.78e-07!94;UBERON:0003076!8.36e-07!12;UBERON:0003057!8.36e-07!12
|ontology_enrichment_uberon=UBERON:0000073!1.63e-26!75;UBERON:0001016!1.63e-26!75;UBERON:0001017!1.78e-26!73;UBERON:0005743!1.78e-26!73;UBERON:0004121!2.31e-21!102;UBERON:0000924!2.31e-21!102;UBERON:0006601!2.31e-21!102;UBERON:0001049!5.27e-20!52;UBERON:0005068!5.27e-20!52;UBERON:0006241!5.27e-20!52;UBERON:0007135!5.27e-20!52;UBERON:0000955!1.90e-18!50;UBERON:0006238!1.90e-18!50;UBERON:0002616!1.19e-17!49;UBERON:0002020!2.64e-17!34;UBERON:0002346!2.68e-17!71;UBERON:0003075!2.68e-17!71;UBERON:0007284!2.68e-17!71;UBERON:0000033!2.44e-16!63;UBERON:0003080!4.69e-14!40;UBERON:0003056!1.15e-13!49;UBERON:0002791!1.32e-13!29;UBERON:0003528!1.32e-13!29;UBERON:0001893!1.32e-13!29;UBERON:0002780!1.97e-13!39;UBERON:0001890!1.97e-13!39;UBERON:0006240!1.97e-13!39;UBERON:0000956!7.49e-09!21;UBERON:0001869!7.49e-09!21;UBERON:0000203!7.49e-09!21;UBERON:0002619!5.03e-07!17;UBERON:0007811!6.51e-07!86;UBERON:0000153!6.78e-07!94;UBERON:0003076!8.36e-07!12;UBERON:0003057!8.36e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.35e-29,73;UBERON:0001016,2.21e-28,75;UBERON:0000073,4.44e-27,54;UBERON:0001049,6.02e-26,52;UBERON:0005068,6.02e-26,52;UBERON:0006241,6.02e-26,52;UBERON:0007135,6.02e-26,52;UBERON:0002020,2.25e-24,34;UBERON:0004121,1.62e-22,95;UBERON:0000924,1.62e-22,95;UBERON:0006601,1.62e-22,95;UBERON:0002346,9.14e-22,64;UBERON:0003075,9.14e-22,64;UBERON:0007284,9.14e-22,64;UBERON:0010371,2.67e-18,73;UBERON:0000955,3.64e-18,47;UBERON:0006238,3.64e-18,47;UBERON:0002616,1.43e-16,46;UBERON:0003080,1.18e-15,40;UBERON:0003528,1.22e-15,29;UBERON:0002791,1.22e-15,29;UBERON:0001893,1.22e-15,29;UBERON:0002780,2.56e-14,39;UBERON:0001890,2.56e-14,39;UBERON:0006240,2.56e-14,39;UBERON:0002240,3.89e-14,6;UBERON:0005174,3.89e-14,6;UBERON:0001137,3.89e-14,6;UBERON:0003056,1.47e-13,49;UBERON:0010314,3.25e-13,92;UBERON:0001948,2.44e-12,5;UBERON:0002315,2.44e-12,5;UBERON:0003076,1.13e-11,12;UBERON:0003057,1.13e-11,12;UBERON:0002619,2.71e-10,17;UBERON:0002420,3.11e-10,8;UBERON:0007245,3.11e-10,8;UBERON:0010009,3.11e-10,8;UBERON:0010011,3.11e-10,8;UBERON:0000454,3.11e-10,8;UBERON:0000025,1.90e-09,114;UBERON:0004111,2.01e-08,122;UBERON:0002257,4.26e-08,3;UBERON:0000369,4.31e-08,5;UBERON:0002435,4.31e-08,5;UBERON:0000204,4.31e-08,5;UBERON:0010082,4.31e-08,5;UBERON:0000956,5.30e-08,21;UBERON:0001869,5.30e-08,21;UBERON:0000203,5.30e-08,21;UBERON:0011216,3.11e-07,194
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,1.43752564364972,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.384218305321555,0.622137673850866,0.810035629990144,0.630974884054146,3.14216082844184,1.32521124570968,1.10241719293459,0.479227355091182,1.83843757322004,2.20231761998777,1.14918604276669,0.921639199537461,2.1101806036831,1.28082701043374,1.56274011167028,1.3959149950069,0.56276261003168,1.37518422999129,1.76777151284201,1.70846016958924,1.86399445825301,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.585561594023094,0.41889341362691,0,0,0,0,1.3481157546434,0.457500602818626,2.51308704225729,0.695297280769106,1.27857728665165,1.87009240103604,1.78465389374533,0,0,0,0,0,0.229902104433473,0.360124259610698,0.452114453507145,0.204109497453984,0,0.374806898238915,1.55222022443409,0,0.567318240503458,0.175951124163949,0.219195732427575,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.493679549740441,0,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,1.47202963994889,1.9551876352064,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0.342745537829186,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0.488894929326078,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.28440471990234,1.87538698547525,0,0,0,0.390438744296638,0,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.790575555893047,2.89189184779626,0.141940085208269,0.178065603667255,0,0.824850614862677,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0,0,0.16488625294148,0.645857706783622,0.241251699712623,0,0,0.291480836629851,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.540026704109006,0,0.436725127492355,0.134864346384821,0.41326727862668,0,0,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.387479470433193,0.337912250981556,0.117357238645754,0.781226309063701,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,1.84130094602871,1.71868654031819,4.1244763762485,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0,1.55328093525546,0.207574695168353,0.798049746802062,0.341467211508268,0.729320151204882,0.209613162627982,1.10306105070008,0.666740183404846,0.206035057238894,0.320919209591815,0,0.760437899670719,0.188626341386076,0.187283014939765,0.320125762024346,0.34461281373368,1.42888107384922,0.463537303779422,0.964546102318525,0.824171801606613,0,0.685738504770831,0.177475806159338,0.238436189947321,0.436039249896986,0.470546902076653,0.423073039458382,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0,0.197008964751127,0,0.619747364743864,0.771626443924566,1.24905288968973,0,0,0.57386499620653,0.220591419119515,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,1.43752564364972,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.384218305321555,0.622137673850866,0.810035629990144,0.630974884054146,3.14216082844184,1.32521124570968,1.10241719293459,0.479227355091182,1.83843757322004,2.20231761998777,1.14918604276669,0.921639199537461,2.1101806036831,1.28082701043374,1.56274011167028,1.3959149950069,0.56276261003168,1.37518422999129,1.76777151284201,1.70846016958924,1.86399445825301,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.585561594023094,0.41889341362691,0,0,0,0,1.3481157546434,0.457500602818626,2.51308704225729,0.695297280769106,1.27857728665165,1.87009240103604,1.78465389374533,0,0,0,0,0,0.229902104433473,0.360124259610698,0.452114453507145,0.204109497453984,0,0.374806898238915,1.55222022443409,0,0.567318240503458,0.175951124163949,0.219195732427575,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.493679549740441,0,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,1.47202963994889,1.9551876352064,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0.342745537829186,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0.488894929326078,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.28440471990234,1.87538698547525,0,0,0,0.390438744296638,0,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.790575555893047,2.89189184779626,0.141940085208269,0.178065603667255,0,0.824850614862677,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0,0,0.16488625294148,0.645857706783622,0.241251699712623,0,0,0.291480836629851,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.540026704109006,0,0.436725127492355,0.134864346384821,0.41326727862668,0,0,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.387479470433193,0.337912250981556,0.117357238645754,0.781226309063701,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,1.84130094602871,1.71868654031819,4.1244763762485,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0,1.55328093525546,0.207574695168353,0.798049746802062,0.341467211508268,0.729320151204882,0.209613162627982,1.10306105070008,0.666740183404846,0.206035057238894,0.320919209591815,0,0.760437899670719,0.188626341386076,0.187283014939765,0.320125762024346,0.34461281373368,1.42888107384922,0.463537303779422,0.964546102318525,0.824171801606613,0,0.685738504770831,0.177475806159338,0.238436189947321,0.436039249896986,0.470546902076653,0.423073039458382,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0,0.197008964751127,0,0.619747364743864,0.771626443924566,1.24905288968973,0,0,0.57386499620653,0.220591419119515,0.231867835620421
|short_description=p8@Nav1
|short_description=p8@Nav1
}}
}}

Latest revision as of 10:47, 26 September 2015

Short description:p8@Nav1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Nav1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_uc007ctk.1, uc011wsl.1_5end
EntrezGene:Nav1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Nav1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system2.35e-2973
nervous system2.21e-2875
regional part of nervous system4.44e-2754
neural tube6.02e-2652
neural rod6.02e-2652
future spinal cord6.02e-2652
neural keel6.02e-2652
gray matter2.25e-2434
ectoderm-derived structure1.62e-2295
ectoderm1.62e-2295
presumptive ectoderm1.62e-2295
neurectoderm9.14e-2264
neural plate9.14e-2264
presumptive neural plate9.14e-2264
ecto-epithelium2.67e-1873
brain3.64e-1847
future brain3.64e-1847
regional part of brain1.43e-1646
anterior neural tube1.18e-1540
brain grey matter1.22e-1529
regional part of telencephalon1.22e-1529
telencephalon1.22e-1529
regional part of forebrain2.56e-1439
forebrain2.56e-1439
future forebrain2.56e-1439
spinal cord3.89e-146
dorsal region element3.89e-146
dorsum3.89e-146
pre-chordal neural plate1.47e-1349
structure with developmental contribution from neural crest3.25e-1392
regional part of spinal cord2.44e-125
gray matter of spinal cord2.44e-125
posterior neural tube1.13e-1112
chordal neural plate1.13e-1112
regional part of cerebral cortex2.71e-1017
basal ganglion3.11e-108
nuclear complex of neuraxis3.11e-108
aggregate regional part of brain3.11e-108
collection of basal ganglia3.11e-108
cerebral subcortex3.11e-108
tube1.90e-09114
anatomical conduit2.01e-08122
ventral horn of spinal cord4.26e-083
corpus striatum4.31e-085
striatum4.31e-085
ventral part of telencephalon4.31e-085
future corpus striatum4.31e-085
cerebral cortex5.30e-0821
cerebral hemisphere5.30e-0821
pallium5.30e-0821
organ system subdivision3.11e-07194
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