FFCP PHASE1:Mm9::chr14:79915521..79915539,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13709 | |EntrezGene=13709 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1335 | |||
|TSSclassifier=NA | |||
|UniProt=F8WHL6 | |UniProt=F8WHL6 | ||
|association_with_transcript=28bp_to_ENSMUST00000088767_5end | |association_with_transcript=28bp_to_ENSMUST00000088767_5end | ||
|cluster_id=chr14:79915521..79915539,+ | |||
|description=CAGE_peak_5_at_Elf1_5end | |description=CAGE_peak_5_at_Elf1_5end | ||
|id=chr14:79915521..79915539,+ | |id=chr14:79915521..79915539,+ | ||
|ontology_enrichment_celltype=CL:0000988!2.54e-10!32;CL:0002032!2.54e-10!32;CL:0000037!2.54e-10!32;CL:0000566!2.54e-10!32;CL:0000837!2.54e-10!32;CL:0000838!2.83e-08!12;CL:0000084!1.40e-07!11;CL:0000827!1.40e-07!11;CL:0000738!2.78e-07!17;CL:0002087!2.78e-07!17;CL:0002031!2.87e-07!25;CL:0000542!4.23e-07!13;CL:0000051!4.23e-07!13 | |ontology_enrichment_celltype=CL:0000988!2.54e-10!32;CL:0002032!2.54e-10!32;CL:0000037!2.54e-10!32;CL:0000566!2.54e-10!32;CL:0000837!2.54e-10!32;CL:0000838!2.83e-08!12;CL:0000084!1.40e-07!11;CL:0000827!1.40e-07!11;CL:0000738!2.78e-07!17;CL:0002087!2.78e-07!17;CL:0002031!2.87e-07!25;CL:0000542!4.23e-07!13;CL:0000051!4.23e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.25e-18,32;CL:0002032,2.25e-18,32;CL:0000037,2.25e-18,32;CL:0000837,2.25e-18,32;CL:0000838,2.11e-13,12;CL:0002031,2.60e-12,25;CL:0000084,3.51e-12,11;CL:0000827,3.51e-12,11;CL:0000542,4.37e-12,13;CL:0000051,4.37e-12,13;CL:0000738,7.31e-12,17;CL:0002087,7.31e-12,17;CL:0002320,2.42e-10,46;CL:0000134,2.42e-10,46;CL:0000791,6.01e-10,9;CL:0000789,6.01e-10,9;CL:0002420,6.01e-10,9;CL:0002419,6.01e-10,9;CL:0000790,6.01e-10,9;CL:0000624,8.06e-09,8;CL:0000049,4.32e-08,19;CL:0000219,9.98e-08,54;CL:0000893,9.21e-07,6;CL:0002489,9.21e-07,6;CL:0000898,9.21e-07,6;CL:0000809,9.21e-07,6;CL:0000810,9.21e-07,6;CL:0000895,9.21e-07,6;CL:0000808,9.21e-07,6;CL:0000894,9.21e-07,6;CL:0000806,9.21e-07,6;CL:0000807,9.21e-07,6;CL:0000805,9.21e-07,6;CL:0002425,9.21e-07,6;CL:0002436,9.21e-07,6;CL:0002427,9.21e-07,6;CL:0002428,9.21e-07,6;CL:0002429,9.21e-07,6;CL:0002433,9.21e-07,6;CL:0002431,9.21e-07,6;CL:0002432,9.21e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.65e-13!48;UBERON:0002390!3.78e-12!45;UBERON:0003061!3.78e-12!45;UBERON:0002405!9.99e-12!70;UBERON:0001007!1.89e-11!128;UBERON:0001555!1.89e-11!128;UBERON:0007026!1.89e-11!128;UBERON:0004119!4.63e-11!130;UBERON:0000925!4.63e-11!130;UBERON:0006595!4.63e-11!130;UBERON:0004921!8.77e-11!126;UBERON:0004185!8.77e-11!126;UBERON:0004177!1.63e-09!29;UBERON:0000077!4.38e-08!97;UBERON:0006562!7.17e-08!24;UBERON:0001557!7.17e-08!24;UBERON:0001042!7.17e-08!24;UBERON:0008814!7.17e-08!24;UBERON:0009145!7.17e-08!24;UBERON:0003929!8.36e-08!55;UBERON:0002370!1.20e-07!23;UBERON:0000974!1.20e-07!23;UBERON:0004807!1.20e-07!23;UBERON:0005058!1.20e-07!23;UBERON:0003351!1.20e-07!23;UBERON:0009113!1.20e-07!23;UBERON:0003295!1.20e-07!23;UBERON:0009722!1.20e-07!23;UBERON:0005562!1.20e-07!23;UBERON:0007690!1.20e-07!23;UBERON:0005057!1.35e-07!51;UBERON:0001041!1.47e-07!92;UBERON:0005911!2.00e-07!69;UBERON:0000072!3.08e-07!27;UBERON:0003408!6.51e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.69e-20,48;UBERON:0002405,4.69e-20,48;UBERON:0002390,7.97e-19,45;UBERON:0003061,7.97e-19,45;UBERON:0004177,8.70e-15,29;UBERON:0005057,8.70e-15,29;UBERON:0002370,9.72e-14,23;UBERON:0000974,9.72e-14,23;UBERON:0004807,9.72e-14,23;UBERON:0005058,9.72e-14,23;UBERON:0003351,9.72e-14,23;UBERON:0009113,9.72e-14,23;UBERON:0003295,9.72e-14,23;UBERON:0009722,9.72e-14,23;UBERON:0005562,9.72e-14,23;UBERON:0007690,9.72e-14,23;UBERON:0000077,1.22e-13,35;UBERON:0006562,6.35e-13,24;UBERON:0003408,6.35e-13,24;UBERON:0001557,6.35e-13,24;UBERON:0001042,6.35e-13,24;UBERON:0008814,6.35e-13,24;UBERON:0009145,6.35e-13,24;UBERON:0000072,5.88e-12,27;UBERON:0002384,2.42e-10,46;UBERON:0003081,9.52e-09,87;UBERON:0003929,6.25e-08,55;UBERON:0000490,1.21e-07,66;UBERON:0000926,2.43e-07,120;UBERON:0004120,2.43e-07,120;UBERON:0006603,2.43e-07,120;UBERON:0007811,8.13e-07,36 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,0.60492842261366,0,2.18243053485457,1.40167584357315,4.51931632045517,3.94208422024667,4.21316147379588,1.71217968225505,1.35612670292072,6.16322627752341,4.02133851127388,0.999329285446988,1.41732687172878,0,9.62159604342625,8.91243818437302,5.51706547337439,0.510259740906419,5.46100231604869,8.61959304158487,2.71987118748791,0.91763712426868,0,0.430761996159075,2.58565479223067,0.190023419456374,0,0.665191531965914,0,0,0,1.44425809875637,0.664938581433969,1.63335485009895,3.34825304589526,3.1253413780952,4.18818995179039,5.29408339227913,2.73218193983378,2.91306211818692,0,0.101376931219515,0,0,0,0,0.194429899074283,0,0,13.2548258785612,4.35217285206807,7.05796978199174,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0.579728977403356,0,0.679971333707751,0,0,0,0.280888840263504,0.170430322578058,0,0.35333957451034,0,0,0,0,0.216491041011214,0,1.01104889002957,0,7.50919862576798,0.148442139064825,0,0,0,0,0.470354828542819,0,0.494389935468748,0.578397427679647,1.76922110389975,0.161766849947409,1.54589062922275,2.42437626567611,0,0,0,0,31.8708231185748,13.7977628128484,31.6404865411931,0.149790639404823,0,0,0.173824320192276,0,0,0,0.101839363850316,0.995255764880744,0.252722758433675,0.420883711772948,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0.556094498451196,1.0447564995665,1.4404749548556,0,20.3641824320838,13.3820911699652,15.344828967362,0,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0.402619256281115,0,0.205809224758569,0.330418782983798,0.264450566663544,0,0.232236671860439,0.38660238396628,0.605050573870028,0.444756087689741,0.570676878337677,0.474529061544512,0.494096864172033,1.75934646160189,0.795825888164603,0.38992817423824,0,1.51296634912286,0.398282546508734,0,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,0.72353147925725,0.50925170356284,1.15078454980324,1.13494658742525,0,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,0.739012760666419,0,0,0.339490171550376,0.469380496577004,0.502518772325447,0.238043640886014,0,0.157635144106191,0.44292937929755,0.318909537314974,0.491589944147214,1.03610989119537,0.433947175744535,6.03165135757089,2.71952841909355,1.47529281905711,0.827810238914197,0,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,1.48473110675282,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,1.26414703174326,0,0,0.680879211507576,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0.882113592219848,1.81374878235628,1.29171541356724,1.62844897306021,1.3130957840345,0.656563598980245,0.582961673259701,0,1.02522528478712,0.619160603889667,2.03713980106683,1.50694765603753,1.91371918809435,0.915112692826091,9.68877050964975,14.2750481370131,10.6413979829406,0,0,1.01659733563424,0.972048067396211,2.50905955217362,0.87345025498471,0.674321731924103,0.991841468704031,0.785267825952089,1.94422459937689,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,4.4241556887945,0.202725215290164,1.02710957164827,1.03936658382236,1.9692936523423,2.18549490259391,3.12508168751919,3.10148007066612,3.23092639834072,3.04827226619999,3.2264379243789,3.11865218367208,4.42574471545516,5.96072201126002,0.906921534460845,0.221985953374065,0,0,1.9318959403219,0.750729901804728,2.19781949120718,3.00115730710692,1.00314420807073,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0,0.287177344778066,0.952587382566147,0.115884325944855,0.192909220463705,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0.476872379894642,0,0.188218760830661,0.25384382367503,0,0.263069711437843,0,0.561142271657738,0.237270036248348,0,0,0.309873682371932,0.192906610981141,0.499621155875892,0.467863216890817,0,0.382576664137687,0.441182838239031,0.231867835620421 | |phase1_expression=0,0.697950815278722,1.36499771816861,0.60492842261366,0,2.18243053485457,1.40167584357315,4.51931632045517,3.94208422024667,4.21316147379588,1.71217968225505,1.35612670292072,6.16322627752341,4.02133851127388,0.999329285446988,1.41732687172878,0,9.62159604342625,8.91243818437302,5.51706547337439,0.510259740906419,5.46100231604869,8.61959304158487,2.71987118748791,0.91763712426868,0,0.430761996159075,2.58565479223067,0.190023419456374,0,0.665191531965914,0,0,0,1.44425809875637,0.664938581433969,1.63335485009895,3.34825304589526,3.1253413780952,4.18818995179039,5.29408339227913,2.73218193983378,2.91306211818692,0,0.101376931219515,0,0,0,0,0.194429899074283,0,0,13.2548258785612,4.35217285206807,7.05796978199174,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0.579728977403356,0,0.679971333707751,0,0,0,0.280888840263504,0.170430322578058,0,0.35333957451034,0,0,0,0,0.216491041011214,0,1.01104889002957,0,7.50919862576798,0.148442139064825,0,0,0,0,0.470354828542819,0,0.494389935468748,0.578397427679647,1.76922110389975,0.161766849947409,1.54589062922275,2.42437626567611,0,0,0,0,31.8708231185748,13.7977628128484,31.6404865411931,0.149790639404823,0,0,0.173824320192276,0,0,0,0.101839363850316,0.995255764880744,0.252722758433675,0.420883711772948,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0.556094498451196,1.0447564995665,1.4404749548556,0,20.3641824320838,13.3820911699652,15.344828967362,0,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0.402619256281115,0,0.205809224758569,0.330418782983798,0.264450566663544,0,0.232236671860439,0.38660238396628,0.605050573870028,0.444756087689741,0.570676878337677,0.474529061544512,0.494096864172033,1.75934646160189,0.795825888164603,0.38992817423824,0,1.51296634912286,0.398282546508734,0,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,0.72353147925725,0.50925170356284,1.15078454980324,1.13494658742525,0,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,0.739012760666419,0,0,0.339490171550376,0.469380496577004,0.502518772325447,0.238043640886014,0,0.157635144106191,0.44292937929755,0.318909537314974,0.491589944147214,1.03610989119537,0.433947175744535,6.03165135757089,2.71952841909355,1.47529281905711,0.827810238914197,0,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,1.48473110675282,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,1.26414703174326,0,0,0.680879211507576,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0.882113592219848,1.81374878235628,1.29171541356724,1.62844897306021,1.3130957840345,0.656563598980245,0.582961673259701,0,1.02522528478712,0.619160603889667,2.03713980106683,1.50694765603753,1.91371918809435,0.915112692826091,9.68877050964975,14.2750481370131,10.6413979829406,0,0,1.01659733563424,0.972048067396211,2.50905955217362,0.87345025498471,0.674321731924103,0.991841468704031,0.785267825952089,1.94422459937689,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,4.4241556887945,0.202725215290164,1.02710957164827,1.03936658382236,1.9692936523423,2.18549490259391,3.12508168751919,3.10148007066612,3.23092639834072,3.04827226619999,3.2264379243789,3.11865218367208,4.42574471545516,5.96072201126002,0.906921534460845,0.221985953374065,0,0,1.9318959403219,0.750729901804728,2.19781949120718,3.00115730710692,1.00314420807073,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0,0.287177344778066,0.952587382566147,0.115884325944855,0.192909220463705,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0.476872379894642,0,0.188218760830661,0.25384382367503,0,0.263069711437843,0,0.561142271657738,0.237270036248348,0,0,0.309873682371932,0.192906610981141,0.499621155875892,0.467863216890817,0,0.382576664137687,0.441182838239031,0.231867835620421 | ||
|short_description=p5@Elf1 | |short_description=p5@Elf1 | ||
}} | }} |
Latest revision as of 10:53, 26 September 2015
Short description: | p5@Elf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Elf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1335 |
Association with transcript: | 28bp_to_ENSMUST00000088767_5end |
EntrezGene: | Elf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.69e-20 | 48 |
immune system | 4.69e-20 | 48 |
hematopoietic system | 7.97e-19 | 45 |
blood island | 7.97e-19 | 45 |
hemopoietic organ | 8.70e-15 | 29 |
immune organ | 8.70e-15 | 29 |
thymus | 9.72e-14 | 23 |
neck | 9.72e-14 | 23 |
respiratory system epithelium | 9.72e-14 | 23 |
hemolymphoid system gland | 9.72e-14 | 23 |
pharyngeal epithelium | 9.72e-14 | 23 |
thymic region | 9.72e-14 | 23 |
pharyngeal gland | 9.72e-14 | 23 |
entire pharyngeal arch endoderm | 9.72e-14 | 23 |
thymus primordium | 9.72e-14 | 23 |
early pharyngeal endoderm | 9.72e-14 | 23 |
mixed endoderm/mesoderm-derived structure | 1.22e-13 | 35 |
pharynx | 6.35e-13 | 24 |
gland of gut | 6.35e-13 | 24 |
upper respiratory tract | 6.35e-13 | 24 |
chordate pharynx | 6.35e-13 | 24 |
pharyngeal arch system | 6.35e-13 | 24 |
pharyngeal region of foregut | 6.35e-13 | 24 |
segment of respiratory tract | 5.88e-12 | 27 |
connective tissue | 2.42e-10 | 46 |
lateral plate mesoderm | 9.52e-09 | 87 |
gut epithelium | 6.25e-08 | 55 |
unilaminar epithelium | 1.21e-07 | 66 |
mesoderm | 2.43e-07 | 120 |
mesoderm-derived structure | 2.43e-07 | 120 |
presumptive mesoderm | 2.43e-07 | 120 |
craniocervical region | 8.13e-07 | 36 |