FFCP PHASE1:Mm9::chr12:120476493..120476534,-: Difference between revisions
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{{FFCP|EntrezGene=320910|HGNC=|MCL_coexpression_id=931|UniProt=Q0VBD0|association_with_transcript=214bp_to_NM_177290,uc007pik.1,uc007pil.1,uc007pim.1,uc011yvv.1_5end|description=CAGE_peak_3_at_Itgb8_5end|id=chr12:120476493..120476534,-|ontology_enrichment_celltype=CL:0000221!6.56e-15!44;CL:0000133!6.56e-15!44;CL:0002319!3.38e-14!43;CL:0000540!3.88e-13!33;CL:0000047!3.88e-13!33;CL:0000031!3.88e-13!33;CL:0000404!3.88e-13!33;CL:0000117!1.35e-11!23;CL:0000337!1.35e-11!23;CL:0000055!7.37e-11!50;CL:0000393!4.08e-10!39;CL:0000211!4.08e-10!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.28e-16,23;CL:0000337,1.28e-16,23;CL:0000540,2.67e-14,33;CL:0000047,2.67e-14,33;CL:0000031,2.67e-14,33;CL:0000404,2.67e-14,33;CL:0000221,1.11e-13,44;CL:0000133,1.11e-13,44;CL:0002319,9.88e-13,43;CL:0000393,9.11e-12,39;CL:0000211,9.11e-12,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.68e-38!102;UBERON:0000924!5.68e-38!102;UBERON:0006601!5.68e-38!102;UBERON:0000073!1.26e-29!75;UBERON:0001016!1.26e-29!75;UBERON:0001017!5.95e-28!73;UBERON:0005743!5.95e-28!73;UBERON:0002346!1.86e-26!71;UBERON:0003075!1.86e-26!71;UBERON:0007284!1.86e-26!71;UBERON:0000033!2.09e-26!63;UBERON:0001049!4.09e-21!52;UBERON:0005068!4.09e-21!52;UBERON:0006241!4.09e-21!52;UBERON:0007135!4.09e-21!52;UBERON:0003056!7.54e-21!49;UBERON:0000955!7.19e-20!50;UBERON:0006238!7.19e-20!50;UBERON:0002616!3.01e-19!49;UBERON:0002020!1.06e-15!34;UBERON:0003080!1.77e-15!40;UBERON:0002780!7.34e-15!39;UBERON:0001890!7.34e-15!39;UBERON:0006240!7.34e-15!39;UBERON:0007811!1.77e-13!86;UBERON:0000153!2.69e-13!94;UBERON:0002791!9.21e-13!29;UBERON:0003528!9.21e-13!29;UBERON:0001893!9.21e-13!29;UBERON:0000956!2.41e-09!21;UBERON:0001869!2.41e-09!21;UBERON:0000203!2.41e-09!21;UBERON:0000020!5.63e-08!12;UBERON:0001032!5.63e-08!12;UBERON:0004456!5.63e-08!12;UBERON:0002619!5.83e-08!17;UBERON:0005085!6.44e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.39e-43,95;UBERON:0000924,2.39e-43,95;UBERON:0006601,2.39e-43,95;UBERON:0010371,5.58e-39,73;UBERON:0002346,8.90e-33,64;UBERON:0003075,8.90e-33,64;UBERON:0007284,8.90e-33,64;UBERON:0001016,7.08e-32,75;UBERON:0001017,1.66e-29,73;UBERON:0000073,9.23e-28,54;UBERON:0001049,8.05e-26,52;UBERON:0005068,8.05e-26,52;UBERON:0006241,8.05e-26,52;UBERON:0007135,8.05e-26,52;UBERON:0003056,1.00e-24,49;UBERON:0010314,2.91e-21,92;UBERON:0002020,2.99e-21,34;UBERON:0000955,5.90e-21,47;UBERON:0006238,5.90e-21,47;UBERON:0002616,4.79e-20,46;UBERON:0003080,1.40e-17,40;UBERON:0002780,1.15e-16,39;UBERON:0001890,1.15e-16,39;UBERON:0006240,1.15e-16,39;UBERON:0003528,1.34e-16,29;UBERON:0002791,1.34e-16,29;UBERON:0001893,1.34e-16,29;UBERON:0000956,3.70e-11,21;UBERON:0001869,3.70e-11,21;UBERON:0000203,3.70e-11,21;UBERON:0005085,8.22e-10,13;UBERON:0000020,1.92e-09,12;UBERON:0001032,1.92e-09,12;UBERON:0004456,1.92e-09,12;UBERON:0002021,3.71e-09,10;UBERON:0000411,3.71e-09,10;UBERON:0001950,3.71e-09,10;UBERON:0003076,6.14e-09,12;UBERON:0003057,6.14e-09,12;UBERON:0002619,6.28e-09,17;UBERON:0000033,1.78e-08,13;UBERON:0000970,2.88e-08,9;UBERON:0000019,2.88e-08,9;UBERON:0000047,2.88e-08,9;UBERON:0010312,2.88e-08,9;UBERON:0004088,2.88e-08,9;UBERON:0002104,2.88e-08,9;UBERON:0001456,2.88e-08,9;UBERON:0003072,2.88e-08,9;UBERON:0004128,2.88e-08,9;UBERON:0003071,2.88e-08,9;UBERON:0002240,2.83e-07,6;UBERON:0005174,2.83e-07,6;UBERON:0001137,2.83e-07,6;UBERON:0002420,8.72e-07,8;UBERON:0007245,8.72e-07,8;UBERON:0010009,8.72e-07,8;UBERON:0010011,8.72e-07,8;UBERON:0000454,8.72e-07,8|phase1_expression=10.890121603126,0,0,0,0,0.16787927191189,0.700837921786577,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0.319984845586813,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.439372365468944,0.777719596297134,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,1.03134418455488,4.45096213891115,2.11596391708813,1.26766280701236,0,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,1.45165457231869,1.35005938331691,1.26194976810829,2.57085885963423,6.62605622854841,1.46988959057945,0.958454710182364,1.83843757322004,6.60695285996332,4.08599481872601,7.21950706304344,1.31886287730194,1.00636407962651,1.04182674111352,6.97957497503452,6.75315132038016,6.57032465440283,6.77645746589436,7.83044244395066,1.86399445825301,30.6691082999395,39.9017837363828,0,0,0,0,0,0,0.561777680527007,0,0,0,47.3233890449646,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0.753613202763113,0.470354828542819,0.376999773989026,0.247194967734374,0.289198713839823,0,0.647067399789637,0.220841518460394,0,0,3.80615036115011,3.77004072264219,0.255457055208591,0,0,0,5.84183493678809,2.28750301409313,1.38219787324151,3.12883776346098,2.04572365864264,7.2725815595846,6.48965052271031,0.305518091550949,0.124406970610093,0.505445516867349,8.62811609134543,0.650602214813519,4.36813998423599,3.78130472591233,3.31550599238573,6.80364991513279,6.40568601424249,7.30873451565885,7.50239775143145,0.215567992932842,0.189106080167819,0.175951124163949,1.09597866213787,0.278047249225598,1.0447564995665,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0,0.36012412292203,0,0.393528463494808,0.154267112887378,0,0,0,0.493679549740441,0.656669856316381,0.0810688095458557,0.584799949701329,0,0.268412837520744,3.15434922846191,1.64647379806855,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.350679099451593,0.379419222745544,0.885660887877613,0.784993639206874,0.493588655687202,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0,0.318909537314974,0.491589944147214,0.518054945597687,0,0,0,0,1.10374698521893,9.47248480927973,14.8858841972098,0,0.504941854408746,0.315508219416257,0.390438744296638,2.15423397732799,1.19484398976276,0.891194696329576,0.566153061577665,1.21443210502468,0.584511715822624,0.395287777946524,4.17717711348349,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,1.26414703174326,0,0,0.340439605753788,2.52085531643834,0.517434735131018,1.28602221018955,0.354680467284547,0.178368817602071,0.987294123612726,1.522324745573,0.23467170806371,0,0,1.48397627647332,1.45317984026315,1.80938774784468,2.26807453605959,2.29797259643086,0.291480836629851,15.7611506708933,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.324016022465404,0,0.436725127492355,0.134864346384821,0.165306911450672,0,0,0,0,0.747582730219894,0.330916980914195,0.194451188344048,0.387479470433193,0.506868376472335,0,0.911430693907651,0.629156066554265,0,0,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.304827226619999,0,0.0974578807397524,0,0.116876902181569,0.906921534460845,0,0,0,0.19318959403219,0,0.915758121336325,0.214368379079066,0,2.82375921308533,1.84130094602871,2.86447756719698,2.23409137046794,1.37016503954128,4.5323633843382,4.05013500139084,2.70192721934532,2.26571204492102,4.65984280576638,3.00983307994112,2.39414924040619,1.70733605754134,0.729320151204882,0,0,0.666740183404846,0.206035057238894,0,0.505394423527595,1.2673964994512,2.07488975524684,0.655490552289177,1.28050304809739,0.631790158511746,0,0.927074607558844,0.578727661391115,2.47251540481984,0.883193520806384,0.342869252385415,0.532427418478012,1.43061713968393,0.581385666529314,0.564656282491984,0.676916863133412,1.09756783723664,1.57841826862706,1.35804113845862,0,1.54225523561426,0.689531376628944,0,0.619747364743864,0.192906610981141,0.249810577937946,0.701794825336225,1.93383948643468,2.10417165275728,2.20591419119516,3.70988536992674|short_description=p3@Itgb8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320910 | |||
|HGNC= | |||
|MCL_coexpression_id=931 | |||
|TSSclassifier=NA | |||
|UniProt=Q0VBD0 | |||
|association_with_transcript=214bp_to_NM_177290,uc007pik.1,uc007pil.1,uc007pim.1,uc011yvv.1_5end | |||
|cluster_id=chr12:120476493..120476534,- | |||
|description=CAGE_peak_3_at_Itgb8_5end | |||
|id=chr12:120476493..120476534,- | |||
|ontology_enrichment_celltype=CL:0000221!6.56e-15!44;CL:0000133!6.56e-15!44;CL:0002319!3.38e-14!43;CL:0000540!3.88e-13!33;CL:0000047!3.88e-13!33;CL:0000031!3.88e-13!33;CL:0000404!3.88e-13!33;CL:0000117!1.35e-11!23;CL:0000337!1.35e-11!23;CL:0000055!7.37e-11!50;CL:0000393!4.08e-10!39;CL:0000211!4.08e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.28e-16,23;CL:0000337,1.28e-16,23;CL:0000540,2.67e-14,33;CL:0000047,2.67e-14,33;CL:0000031,2.67e-14,33;CL:0000404,2.67e-14,33;CL:0000221,1.11e-13,44;CL:0000133,1.11e-13,44;CL:0002319,9.88e-13,43;CL:0000393,9.11e-12,39;CL:0000211,9.11e-12,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.68e-38!102;UBERON:0000924!5.68e-38!102;UBERON:0006601!5.68e-38!102;UBERON:0000073!1.26e-29!75;UBERON:0001016!1.26e-29!75;UBERON:0001017!5.95e-28!73;UBERON:0005743!5.95e-28!73;UBERON:0002346!1.86e-26!71;UBERON:0003075!1.86e-26!71;UBERON:0007284!1.86e-26!71;UBERON:0000033!2.09e-26!63;UBERON:0001049!4.09e-21!52;UBERON:0005068!4.09e-21!52;UBERON:0006241!4.09e-21!52;UBERON:0007135!4.09e-21!52;UBERON:0003056!7.54e-21!49;UBERON:0000955!7.19e-20!50;UBERON:0006238!7.19e-20!50;UBERON:0002616!3.01e-19!49;UBERON:0002020!1.06e-15!34;UBERON:0003080!1.77e-15!40;UBERON:0002780!7.34e-15!39;UBERON:0001890!7.34e-15!39;UBERON:0006240!7.34e-15!39;UBERON:0007811!1.77e-13!86;UBERON:0000153!2.69e-13!94;UBERON:0002791!9.21e-13!29;UBERON:0003528!9.21e-13!29;UBERON:0001893!9.21e-13!29;UBERON:0000956!2.41e-09!21;UBERON:0001869!2.41e-09!21;UBERON:0000203!2.41e-09!21;UBERON:0000020!5.63e-08!12;UBERON:0001032!5.63e-08!12;UBERON:0004456!5.63e-08!12;UBERON:0002619!5.83e-08!17;UBERON:0005085!6.44e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.39e-43,95;UBERON:0000924,2.39e-43,95;UBERON:0006601,2.39e-43,95;UBERON:0010371,5.58e-39,73;UBERON:0002346,8.90e-33,64;UBERON:0003075,8.90e-33,64;UBERON:0007284,8.90e-33,64;UBERON:0001016,7.08e-32,75;UBERON:0001017,1.66e-29,73;UBERON:0000073,9.23e-28,54;UBERON:0001049,8.05e-26,52;UBERON:0005068,8.05e-26,52;UBERON:0006241,8.05e-26,52;UBERON:0007135,8.05e-26,52;UBERON:0003056,1.00e-24,49;UBERON:0010314,2.91e-21,92;UBERON:0002020,2.99e-21,34;UBERON:0000955,5.90e-21,47;UBERON:0006238,5.90e-21,47;UBERON:0002616,4.79e-20,46;UBERON:0003080,1.40e-17,40;UBERON:0002780,1.15e-16,39;UBERON:0001890,1.15e-16,39;UBERON:0006240,1.15e-16,39;UBERON:0003528,1.34e-16,29;UBERON:0002791,1.34e-16,29;UBERON:0001893,1.34e-16,29;UBERON:0000956,3.70e-11,21;UBERON:0001869,3.70e-11,21;UBERON:0000203,3.70e-11,21;UBERON:0005085,8.22e-10,13;UBERON:0000020,1.92e-09,12;UBERON:0001032,1.92e-09,12;UBERON:0004456,1.92e-09,12;UBERON:0002021,3.71e-09,10;UBERON:0000411,3.71e-09,10;UBERON:0001950,3.71e-09,10;UBERON:0003076,6.14e-09,12;UBERON:0003057,6.14e-09,12;UBERON:0002619,6.28e-09,17;UBERON:0000033,1.78e-08,13;UBERON:0000970,2.88e-08,9;UBERON:0000019,2.88e-08,9;UBERON:0000047,2.88e-08,9;UBERON:0010312,2.88e-08,9;UBERON:0004088,2.88e-08,9;UBERON:0002104,2.88e-08,9;UBERON:0001456,2.88e-08,9;UBERON:0003072,2.88e-08,9;UBERON:0004128,2.88e-08,9;UBERON:0003071,2.88e-08,9;UBERON:0002240,2.83e-07,6;UBERON:0005174,2.83e-07,6;UBERON:0001137,2.83e-07,6;UBERON:0002420,8.72e-07,8;UBERON:0007245,8.72e-07,8;UBERON:0010009,8.72e-07,8;UBERON:0010011,8.72e-07,8;UBERON:0000454,8.72e-07,8 | |||
|phase1_expression=10.890121603126,0,0,0,0,0.16787927191189,0.700837921786577,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0.319984845586813,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.439372365468944,0.777719596297134,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,1.03134418455488,4.45096213891115,2.11596391708813,1.26766280701236,0,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,1.45165457231869,1.35005938331691,1.26194976810829,2.57085885963423,6.62605622854841,1.46988959057945,0.958454710182364,1.83843757322004,6.60695285996332,4.08599481872601,7.21950706304344,1.31886287730194,1.00636407962651,1.04182674111352,6.97957497503452,6.75315132038016,6.57032465440283,6.77645746589436,7.83044244395066,1.86399445825301,30.6691082999395,39.9017837363828,0,0,0,0,0,0,0.561777680527007,0,0,0,47.3233890449646,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0.753613202763113,0.470354828542819,0.376999773989026,0.247194967734374,0.289198713839823,0,0.647067399789637,0.220841518460394,0,0,3.80615036115011,3.77004072264219,0.255457055208591,0,0,0,5.84183493678809,2.28750301409313,1.38219787324151,3.12883776346098,2.04572365864264,7.2725815595846,6.48965052271031,0.305518091550949,0.124406970610093,0.505445516867349,8.62811609134543,0.650602214813519,4.36813998423599,3.78130472591233,3.31550599238573,6.80364991513279,6.40568601424249,7.30873451565885,7.50239775143145,0.215567992932842,0.189106080167819,0.175951124163949,1.09597866213787,0.278047249225598,1.0447564995665,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0,0.36012412292203,0,0.393528463494808,0.154267112887378,0,0,0,0.493679549740441,0.656669856316381,0.0810688095458557,0.584799949701329,0,0.268412837520744,3.15434922846191,1.64647379806855,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.350679099451593,0.379419222745544,0.885660887877613,0.784993639206874,0.493588655687202,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0,0.318909537314974,0.491589944147214,0.518054945597687,0,0,0,0,1.10374698521893,9.47248480927973,14.8858841972098,0,0.504941854408746,0.315508219416257,0.390438744296638,2.15423397732799,1.19484398976276,0.891194696329576,0.566153061577665,1.21443210502468,0.584511715822624,0.395287777946524,4.17717711348349,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,1.26414703174326,0,0,0.340439605753788,2.52085531643834,0.517434735131018,1.28602221018955,0.354680467284547,0.178368817602071,0.987294123612726,1.522324745573,0.23467170806371,0,0,1.48397627647332,1.45317984026315,1.80938774784468,2.26807453605959,2.29797259643086,0.291480836629851,15.7611506708933,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.324016022465404,0,0.436725127492355,0.134864346384821,0.165306911450672,0,0,0,0,0.747582730219894,0.330916980914195,0.194451188344048,0.387479470433193,0.506868376472335,0,0.911430693907651,0.629156066554265,0,0,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.304827226619999,0,0.0974578807397524,0,0.116876902181569,0.906921534460845,0,0,0,0.19318959403219,0,0.915758121336325,0.214368379079066,0,2.82375921308533,1.84130094602871,2.86447756719698,2.23409137046794,1.37016503954128,4.5323633843382,4.05013500139084,2.70192721934532,2.26571204492102,4.65984280576638,3.00983307994112,2.39414924040619,1.70733605754134,0.729320151204882,0,0,0.666740183404846,0.206035057238894,0,0.505394423527595,1.2673964994512,2.07488975524684,0.655490552289177,1.28050304809739,0.631790158511746,0,0.927074607558844,0.578727661391115,2.47251540481984,0.883193520806384,0.342869252385415,0.532427418478012,1.43061713968393,0.581385666529314,0.564656282491984,0.676916863133412,1.09756783723664,1.57841826862706,1.35804113845862,0,1.54225523561426,0.689531376628944,0,0.619747364743864,0.192906610981141,0.249810577937946,0.701794825336225,1.93383948643468,2.10417165275728,2.20591419119516,3.70988536992674 | |||
|short_description=p3@Itgb8 | |||
}} |
Latest revision as of 11:00, 26 September 2015
Short description: | p3@Itgb8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Itgb8_5end |
Coexpression cluster: | MCL_coexpression_mm9:931 |
Association with transcript: | 214bp_to_NM_177290, uc007pik.1, uc007pil.1, uc007pim.1, uc011yvv.1_5end |
EntrezGene: | Itgb8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.28e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.28e-16 | 23 |
neuron | 2.67e-14 | 33 |
neuronal stem cell | 2.67e-14 | 33 |
neuroblast | 2.67e-14 | 33 |
electrically signaling cell | 2.67e-14 | 33 |
ectodermal cell | 1.11e-13 | 44 |
neurectodermal cell | 1.11e-13 | 44 |
neural cell | 9.88e-13 | 43 |
electrically responsive cell | 9.11e-12 | 39 |
electrically active cell | 9.11e-12 | 39 |