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FFCP PHASE1:Mm9::chr2:26997949..26998001,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:26997949..26998001,-
|DHSsupport=NA
|short_description=p1@Fam163b
|DPIdataset=NA
|description=CAGE_peak_1_at_Fam163b_5end
|association_with_transcript=0bp_to_NM_175427,uc008ixc.2_5end
|EntrezGene=109349
|EntrezGene=109349
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=B2RVN8,Q8BUM6
|UniProt=B2RVN8,Q8BUM6
|association_with_transcript=0bp_to_NM_175427,uc008ixc.2_5end
|cluster_id=chr2:26997949..26998001,-
|description=CAGE_peak_1_at_Fam163b_5end
|id=chr2:26997949..26998001,-
|ontology_enrichment_celltype=CL:0000117!4.78e-13!23;CL:0000337!4.78e-13!23;CL:0000540!1.65e-08!33;CL:0000047!1.65e-08!33;CL:0000031!1.65e-08!33;CL:0000404!1.65e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.29e-17,23;CL:0000337,1.29e-17,23;CL:0000540,1.38e-10,33;CL:0000047,1.38e-10,33;CL:0000031,1.38e-10,33;CL:0000404,1.38e-10,33;CL:0000393,8.91e-08,39;CL:0000211,8.91e-08,39;CL:0002319,5.82e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.40e-18!52;UBERON:0005068!2.40e-18!52;UBERON:0006241!2.40e-18!52;UBERON:0007135!2.40e-18!52;UBERON:0002020!5.06e-18!34;UBERON:0001017!8.89e-18!73;UBERON:0005743!8.89e-18!73;UBERON:0000955!2.38e-17!50;UBERON:0006238!2.38e-17!50;UBERON:0000073!5.80e-17!75;UBERON:0001016!5.80e-17!75;UBERON:0002346!1.11e-16!71;UBERON:0003075!1.11e-16!71;UBERON:0007284!1.11e-16!71;UBERON:0002616!1.33e-16!49;UBERON:0002791!5.46e-15!29;UBERON:0003528!5.46e-15!29;UBERON:0001893!5.46e-15!29;UBERON:0004121!1.85e-14!102;UBERON:0000924!1.85e-14!102;UBERON:0006601!1.85e-14!102;UBERON:0003080!3.54e-14!40;UBERON:0002780!1.59e-13!39;UBERON:0001890!1.59e-13!39;UBERON:0006240!1.59e-13!39;UBERON:0000033!2.39e-13!63;UBERON:0007811!1.49e-12!86;UBERON:0003056!5.26e-11!49;UBERON:0000153!7.14e-11!94;UBERON:0000956!1.68e-10!21;UBERON:0001869!1.68e-10!21;UBERON:0000203!1.68e-10!21;UBERON:0002619!6.30e-09!17;UBERON:0002021!1.08e-08!10;UBERON:0000411!1.08e-08!10;UBERON:0001950!1.08e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.28e-27,54;UBERON:0001049,1.48e-25,52;UBERON:0005068,1.48e-25,52;UBERON:0006241,1.48e-25,52;UBERON:0007135,1.48e-25,52;UBERON:0002020,1.84e-25,34;UBERON:0001017,5.58e-24,73;UBERON:0001016,7.84e-23,75;UBERON:0000955,1.74e-21,47;UBERON:0006238,1.74e-21,47;UBERON:0003528,3.45e-21,29;UBERON:0002791,3.45e-21,29;UBERON:0001893,3.45e-21,29;UBERON:0002346,1.27e-20,64;UBERON:0003075,1.27e-20,64;UBERON:0007284,1.27e-20,64;UBERON:0002616,1.84e-20,46;UBERON:0003080,5.42e-19,40;UBERON:0002780,4.40e-18,39;UBERON:0001890,4.40e-18,39;UBERON:0006240,4.40e-18,39;UBERON:0010371,6.88e-17,73;UBERON:0004121,1.91e-16,95;UBERON:0000924,1.91e-16,95;UBERON:0006601,1.91e-16,95;UBERON:0003056,3.17e-15,49;UBERON:0000956,7.14e-15,21;UBERON:0001869,7.14e-15,21;UBERON:0000203,7.14e-15,21;UBERON:0010314,6.35e-13,92;UBERON:0002619,1.11e-12,17;UBERON:0002021,1.57e-11,10;UBERON:0000411,1.57e-11,10;UBERON:0001950,1.57e-11,10;UBERON:0002420,1.71e-07,8;UBERON:0007245,1.71e-07,8;UBERON:0010009,1.71e-07,8;UBERON:0010011,1.71e-07,8;UBERON:0000454,1.71e-07,8;UBERON:0003076,4.12e-07,12;UBERON:0003057,4.12e-07,12
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,10.6304112688837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,3.23706337375356,5.81890077199236,4.43681982454325,0,0,0,0,0,0.299600110518405,1.15265491596466,1.65903379693564,1.35005938331691,2.10324961351382,27.1368435183613,18.3320888989839,3.06226998037385,2.30029130443767,2.75765635983006,28.6301290598411,28.4742763929969,24.4234387877427,3.03338461779446,2.92760459527711,2.08365348222704,22.3346399201105,25.8870800614573,24.90611438762,18.2669722993674,16.5151149726959,7.64237727883732,0.151452386666368,0,0,0,0,0.539703191637817,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,2.52351636410202,1.90833859442749,1.82679286987285,1.15307748628029,0.904335843315735,1.05829836422134,0.502666365318702,0,0.578397427679647,0,0,0,0,0,6.14839673724249,1.8850203613211,0,0,0,0,53.0258863493072,46.6650614874999,12.8167439155122,106.206659637481,101.007605645481,26.5968697036237,40.3980745038717,0.101839363850316,0,0,1.05220927943237,0,0,0,0,0.0680364991513279,0,0.374806898238915,2.58703370739016,1.07783996466421,0.945530400839096,0,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.938104239924385,0,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,0.536546802799238,0.233530684734339,0.822799249567402,0.32833492815819,0.810688095458557,0.438599962275997,0.439100230582101,0.134206418760372,125.122519395656,22.0215870491669,0,0.264450566663544,0.213288250535234,0.696710015581316,0.128867461322093,0,0.444756087689741,0.190225626112559,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0,0.342745537829186,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.848725428875941,0,0.335012514883631,0.714130922658041,0.975668239288994,0.630540576424764,0.221464689648775,0.478364305972461,0,0.172684981865896,0,0,0,0,0,28.8991061978026,20.1604100938589,0,0,0,0.780877488593277,1.07711698866399,0,0,0,0.404810701674894,0.292255857911312,0,182.510507727586,0.141940085208269,0,0.162886959353576,0,0,0.728341908464944,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.354680467284547,0,1.15184314421485,1.522324745573,0,0.21183207086382,0,0.16488625294148,0.161464426695906,1.44751019827574,0.477489376012546,0,0,38.0121869121545,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0.621339313086926,0,0.448549638131936,0.165458490457098,1.55560950675238,1.54991788173277,1.520605129417,0.938857909166032,0.39061315453185,1.25831213310853,0,0.288030006257865,2.21207784439725,0,0.205421914329655,3.63778304337826,3.58053391334963,1.98681354781265,1.08175904567972,1.03382669022204,2.82706059854813,2.66723823292499,1.91569751759997,0.779663045918019,1.34696578296461,1.40252282617883,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,153.612501191842,134.875294296603,158.119161709273,118.406842634801,75.3590771747706,80.0717531233083,93.828127532221,95.918416286759,103.316469248399,106.658624220875,0.518936737920883,0.798049746802062,1.02440163452481,0.729320151204882,0.628839487883947,2.38996560985018,1.55572709461131,2.06035057238894,3.20919209591815,1.51618327058278,1.77435509923168,2.07488975524684,1.96647165686753,0.89635213366817,1.95280594449085,1.42888107384922,2.43357084484197,1.54327376370964,2.06042950401653,1.61918812147837,1.71434626192708,2.30718548007139,1.66905332963125,1.16277133305863,1.88218760830661,1.52306294205018,1.64635175585495,1.31534855718921,1.49384525230448,1.68342681497322,1.54225523561426,1.57607171800902,2.04615521584845,1.70430525304563,1.54325288784913,2.74791635731741,1.16965804222704,2.36358159453128,0.956441660344217,1.10295709559758,0.927471342481686
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,10.6304112688837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,3.23706337375356,5.81890077199236,4.43681982454325,0,0,0,0,0,0.299600110518405,1.15265491596466,1.65903379693564,1.35005938331691,2.10324961351382,27.1368435183613,18.3320888989839,3.06226998037385,2.30029130443767,2.75765635983006,28.6301290598411,28.4742763929969,24.4234387877427,3.03338461779446,2.92760459527711,2.08365348222704,22.3346399201105,25.8870800614573,24.90611438762,18.2669722993674,16.5151149726959,7.64237727883732,0.151452386666368,0,0,0,0,0.539703191637817,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,2.52351636410202,1.90833859442749,1.82679286987285,1.15307748628029,0.904335843315735,1.05829836422134,0.502666365318702,0,0.578397427679647,0,0,0,0,0,6.14839673724249,1.8850203613211,0,0,0,0,53.0258863493072,46.6650614874999,12.8167439155122,106.206659637481,101.007605645481,26.5968697036237,40.3980745038717,0.101839363850316,0,0,1.05220927943237,0,0,0,0,0.0680364991513279,0,0.374806898238915,2.58703370739016,1.07783996466421,0.945530400839096,0,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.938104239924385,0,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,0.536546802799238,0.233530684734339,0.822799249567402,0.32833492815819,0.810688095458557,0.438599962275997,0.439100230582101,0.134206418760372,125.122519395656,22.0215870491669,0,0.264450566663544,0.213288250535234,0.696710015581316,0.128867461322093,0,0.444756087689741,0.190225626112559,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0,0.342745537829186,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.848725428875941,0,0.335012514883631,0.714130922658041,0.975668239288994,0.630540576424764,0.221464689648775,0.478364305972461,0,0.172684981865896,0,0,0,0,0,28.8991061978026,20.1604100938589,0,0,0,0.780877488593277,1.07711698866399,0,0,0,0.404810701674894,0.292255857911312,0,182.510507727586,0.141940085208269,0,0.162886959353576,0,0,0.728341908464944,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.354680467284547,0,1.15184314421485,1.522324745573,0,0.21183207086382,0,0.16488625294148,0.161464426695906,1.44751019827574,0.477489376012546,0,0,38.0121869121545,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0.621339313086926,0,0.448549638131936,0.165458490457098,1.55560950675238,1.54991788173277,1.520605129417,0.938857909166032,0.39061315453185,1.25831213310853,0,0.288030006257865,2.21207784439725,0,0.205421914329655,3.63778304337826,3.58053391334963,1.98681354781265,1.08175904567972,1.03382669022204,2.82706059854813,2.66723823292499,1.91569751759997,0.779663045918019,1.34696578296461,1.40252282617883,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,153.612501191842,134.875294296603,158.119161709273,118.406842634801,75.3590771747706,80.0717531233083,93.828127532221,95.918416286759,103.316469248399,106.658624220875,0.518936737920883,0.798049746802062,1.02440163452481,0.729320151204882,0.628839487883947,2.38996560985018,1.55572709461131,2.06035057238894,3.20919209591815,1.51618327058278,1.77435509923168,2.07488975524684,1.96647165686753,0.89635213366817,1.95280594449085,1.42888107384922,2.43357084484197,1.54327376370964,2.06042950401653,1.61918812147837,1.71434626192708,2.30718548007139,1.66905332963125,1.16277133305863,1.88218760830661,1.52306294205018,1.64635175585495,1.31534855718921,1.49384525230448,1.68342681497322,1.54225523561426,1.57607171800902,2.04615521584845,1.70430525304563,1.54325288784913,2.74791635731741,1.16965804222704,2.36358159453128,0.956441660344217,1.10295709559758,0.927471342481686
|short_description=p1@Fam163b
}}
}}

Latest revision as of 11:25, 26 September 2015

Short description:p1@Fam163b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Fam163b_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_NM_175427, uc008ixc.2_5end
EntrezGene:Fam163b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Fam163b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D724.42
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E525.89
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I624.91
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.64
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A453.03
corpus striatum, adult.CNhs10487.19-21D846.67
corpus striatum, neonate N00.CNhs11226.630-43F112.82
cortex, adult.CNhs10473.12-14D5106.21
cortex, neonate N30.CNhs11107.1392-42F2101.01
diencephalon, adult.CNhs10482.20-12F226.60
diencephalon, neonate N30.CNhs11201.1388-42B240.40
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E8125.12
hippocampus, neonate N00.CNhs11228.627-43G122.02
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C228.90
medulla oblongata, neonate N30.CNhs11200.1396-42A320.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I9182.51
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C938.01
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C53.64
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C42.83
thymus, neonate N07.CNhs11211.713-19D32.67
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G71.35
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1153.61
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2134.88
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3158.12
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7118.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A475.36
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A580.07
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A693.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A795.92
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8103.32
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9106.66
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.29e-1723
neuroblast (sensu Vertebrata)1.29e-1723
neuron1.38e-1033
neuronal stem cell1.38e-1033
neuroblast1.38e-1033
electrically signaling cell1.38e-1033
electrically responsive cell8.91e-0839
electrically active cell8.91e-0839
neural cell5.82e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.28e-2754
neural tube1.48e-2552
neural rod1.48e-2552
future spinal cord1.48e-2552
neural keel1.48e-2552
gray matter1.84e-2534
central nervous system5.58e-2473
nervous system7.84e-2375
brain1.74e-2147
future brain1.74e-2147
brain grey matter3.45e-2129
regional part of telencephalon3.45e-2129
telencephalon3.45e-2129
neurectoderm1.27e-2064
neural plate1.27e-2064
presumptive neural plate1.27e-2064
regional part of brain1.84e-2046
anterior neural tube5.42e-1940
regional part of forebrain4.40e-1839
forebrain4.40e-1839
future forebrain4.40e-1839
ecto-epithelium6.88e-1773
ectoderm-derived structure1.91e-1695
ectoderm1.91e-1695
presumptive ectoderm1.91e-1695
pre-chordal neural plate3.17e-1549
cerebral cortex7.14e-1521
cerebral hemisphere7.14e-1521
pallium7.14e-1521
structure with developmental contribution from neural crest6.35e-1392
regional part of cerebral cortex1.11e-1217
occipital lobe1.57e-1110
visual cortex1.57e-1110
neocortex1.57e-1110
basal ganglion1.71e-078
nuclear complex of neuraxis1.71e-078
aggregate regional part of brain1.71e-078
collection of basal ganglia1.71e-078
cerebral subcortex1.71e-078
posterior neural tube4.12e-0712
chordal neural plate4.12e-0712
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