FFCP PHASE1:Mm9::chr17:37187549..37187560,+: Difference between revisions
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{{FFCP|EntrezGene=54393|HGNC=|MCL_coexpression_id=288|UniProt=Q9WV18|association_with_transcript=-15bp_to_ENSMUST00000172792_5end|description=CAGE_peak_7_at_Gabbr1_5end|id=chr17:37187549..37187560,+|ontology_enrichment_celltype=CL:0000117!1.08e-17!23;CL:0000337!1.08e-17!23;CL:0000540!2.41e-13!33;CL:0000047!2.41e-13!33;CL:0000031!2.41e-13!33;CL:0000404!2.41e-13!33;CL:0000393!2.41e-11!39;CL:0000211!2.41e-11!39;CL:0000221!1.38e-09!44;CL:0000133!1.38e-09!44;CL:0002319!2.93e-09!43;CL:0000055!8.51e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.53e-31,23;CL:0000337,1.53e-31,23;CL:0000540,3.44e-20,33;CL:0000047,3.44e-20,33;CL:0000031,3.44e-20,33;CL:0000404,3.44e-20,33;CL:0000393,3.41e-16,39;CL:0000211,3.41e-16,39;CL:0002319,3.70e-14,43;CL:0000221,1.04e-13,44;CL:0000133,1.04e-13,44;CL:0002609,1.48e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.04e-28!73;UBERON:0005743!4.04e-28!73;UBERON:0001049!1.07e-27!52;UBERON:0005068!1.07e-27!52;UBERON:0006241!1.07e-27!52;UBERON:0007135!1.07e-27!52;UBERON:0000073!1.27e-27!75;UBERON:0001016!1.27e-27!75;UBERON:0000955!2.22e-26!50;UBERON:0006238!2.22e-26!50;UBERON:0002616!1.96e-25!49;UBERON:0000033!3.50e-24!63;UBERON:0002020!9.71e-24!34;UBERON:0003080!1.51e-21!40;UBERON:0002346!4.84e-21!71;UBERON:0003075!4.84e-21!71;UBERON:0007284!4.84e-21!71;UBERON:0002780!1.02e-20!39;UBERON:0001890!1.02e-20!39;UBERON:0006240!1.02e-20!39;UBERON:0004121!1.19e-20!102;UBERON:0000924!1.19e-20!102;UBERON:0006601!1.19e-20!102;UBERON:0002791!6.93e-20!29;UBERON:0003528!6.93e-20!29;UBERON:0001893!6.93e-20!29;UBERON:0003056!6.99e-20!49;UBERON:0007811!8.27e-14!86;UBERON:0000956!1.19e-13!21;UBERON:0001869!1.19e-13!21;UBERON:0000203!1.19e-13!21;UBERON:0000153!1.20e-11!94;UBERON:0002619!1.42e-10!17;UBERON:0002021!6.23e-09!10;UBERON:0000411!6.23e-09!10;UBERON:0001950!6.23e-09!10;UBERON:0002420!1.80e-07!8;UBERON:0007245!1.80e-07!8;UBERON:0010009!1.80e-07!8;UBERON:0010011!1.80e-07!8;UBERON:0000454!1.80e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.33e-49,54;UBERON:0001049,3.74e-46,52;UBERON:0005068,3.74e-46,52;UBERON:0006241,3.74e-46,52;UBERON:0007135,3.74e-46,52;UBERON:0002020,2.85e-45,34;UBERON:0001017,1.93e-44,73;UBERON:0001016,5.70e-43,75;UBERON:0000955,1.15e-38,47;UBERON:0006238,1.15e-38,47;UBERON:0003528,1.95e-37,29;UBERON:0002791,1.95e-37,29;UBERON:0001893,1.95e-37,29;UBERON:0002616,6.93e-37,46;UBERON:0002346,1.22e-35,64;UBERON:0003075,1.22e-35,64;UBERON:0007284,1.22e-35,64;UBERON:0003080,8.55e-33,40;UBERON:0004121,1.15e-31,95;UBERON:0000924,1.15e-31,95;UBERON:0006601,1.15e-31,95;UBERON:0002780,3.23e-31,39;UBERON:0001890,3.23e-31,39;UBERON:0006240,3.23e-31,39;UBERON:0010371,5.06e-30,73;UBERON:0003056,2.65e-25,49;UBERON:0000956,8.30e-25,21;UBERON:0001869,8.30e-25,21;UBERON:0000203,8.30e-25,21;UBERON:0010314,8.89e-22,92;UBERON:0002619,1.29e-18,17;UBERON:0002021,1.70e-16,10;UBERON:0000411,1.70e-16,10;UBERON:0001950,1.70e-16,10;UBERON:0000025,1.12e-15,114;UBERON:0004111,5.23e-14,122;UBERON:0002420,1.52e-13,8;UBERON:0007245,1.52e-13,8;UBERON:0010009,1.52e-13,8;UBERON:0010011,1.52e-13,8;UBERON:0000454,1.52e-13,8;UBERON:0003076,5.26e-13,12;UBERON:0003057,5.26e-13,12;UBERON:0002240,3.96e-10,6;UBERON:0005174,3.96e-10,6;UBERON:0001137,3.96e-10,6;UBERON:0011216,5.83e-10,194;UBERON:0000369,4.47e-09,5;UBERON:0002435,4.47e-09,5;UBERON:0000204,4.47e-09,5;UBERON:0010082,4.47e-09,5;UBERON:0001948,1.15e-08,5;UBERON:0002315,1.15e-08,5;UBERON:0002950,1.30e-07,4;UBERON:0001891,1.30e-07,4;UBERON:0009616,1.30e-07,4;UBERON:0010286,1.30e-07,4;UBERON:0000483,5.73e-07,174;UBERON:0000119,8.77e-07,176|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971020706062307,0.125896817975577,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0.514518872071894,0,0,1.41621522601718,2.64495489636016,1.26766280701236,0,0,0,0,0,0,0,4.35496371695606,4.72520784160917,2.52389953621658,3.71346279724945,5.52171352379034,5.14461356702807,4.60058260887535,0.919218786610021,2.20231761998777,6.51205424234457,5.68344173048101,1.45074916503213,3.29355516968675,2.08365348222704,3.62937898701795,5.06486349028512,3.81995619442025,2.65165726926301,3.70166370077668,2.23679334990361,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,2.63502717310392,5.02672096352292,0,0,0,0,4.6435098215495,19.2150253183823,10.0523481690292,6.77914848749878,7.92717917724025,7.68815764870372,7.62533936418461,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.340182495756639,0.384341160854549,0.468508622798644,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,10.3042074796422,6.07137213037778,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54393 | |||
|HGNC= | |||
|MCL_coexpression_id=288 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WV18 | |||
|association_with_transcript=-15bp_to_ENSMUST00000172792_5end | |||
|cluster_id=chr17:37187549..37187560,+ | |||
|description=CAGE_peak_7_at_Gabbr1_5end | |||
|id=chr17:37187549..37187560,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.08e-17!23;CL:0000337!1.08e-17!23;CL:0000540!2.41e-13!33;CL:0000047!2.41e-13!33;CL:0000031!2.41e-13!33;CL:0000404!2.41e-13!33;CL:0000393!2.41e-11!39;CL:0000211!2.41e-11!39;CL:0000221!1.38e-09!44;CL:0000133!1.38e-09!44;CL:0002319!2.93e-09!43;CL:0000055!8.51e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.53e-31,23;CL:0000337,1.53e-31,23;CL:0000540,3.44e-20,33;CL:0000047,3.44e-20,33;CL:0000031,3.44e-20,33;CL:0000404,3.44e-20,33;CL:0000393,3.41e-16,39;CL:0000211,3.41e-16,39;CL:0002319,3.70e-14,43;CL:0000221,1.04e-13,44;CL:0000133,1.04e-13,44;CL:0002609,1.48e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.04e-28!73;UBERON:0005743!4.04e-28!73;UBERON:0001049!1.07e-27!52;UBERON:0005068!1.07e-27!52;UBERON:0006241!1.07e-27!52;UBERON:0007135!1.07e-27!52;UBERON:0000073!1.27e-27!75;UBERON:0001016!1.27e-27!75;UBERON:0000955!2.22e-26!50;UBERON:0006238!2.22e-26!50;UBERON:0002616!1.96e-25!49;UBERON:0000033!3.50e-24!63;UBERON:0002020!9.71e-24!34;UBERON:0003080!1.51e-21!40;UBERON:0002346!4.84e-21!71;UBERON:0003075!4.84e-21!71;UBERON:0007284!4.84e-21!71;UBERON:0002780!1.02e-20!39;UBERON:0001890!1.02e-20!39;UBERON:0006240!1.02e-20!39;UBERON:0004121!1.19e-20!102;UBERON:0000924!1.19e-20!102;UBERON:0006601!1.19e-20!102;UBERON:0002791!6.93e-20!29;UBERON:0003528!6.93e-20!29;UBERON:0001893!6.93e-20!29;UBERON:0003056!6.99e-20!49;UBERON:0007811!8.27e-14!86;UBERON:0000956!1.19e-13!21;UBERON:0001869!1.19e-13!21;UBERON:0000203!1.19e-13!21;UBERON:0000153!1.20e-11!94;UBERON:0002619!1.42e-10!17;UBERON:0002021!6.23e-09!10;UBERON:0000411!6.23e-09!10;UBERON:0001950!6.23e-09!10;UBERON:0002420!1.80e-07!8;UBERON:0007245!1.80e-07!8;UBERON:0010009!1.80e-07!8;UBERON:0010011!1.80e-07!8;UBERON:0000454!1.80e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.33e-49,54;UBERON:0001049,3.74e-46,52;UBERON:0005068,3.74e-46,52;UBERON:0006241,3.74e-46,52;UBERON:0007135,3.74e-46,52;UBERON:0002020,2.85e-45,34;UBERON:0001017,1.93e-44,73;UBERON:0001016,5.70e-43,75;UBERON:0000955,1.15e-38,47;UBERON:0006238,1.15e-38,47;UBERON:0003528,1.95e-37,29;UBERON:0002791,1.95e-37,29;UBERON:0001893,1.95e-37,29;UBERON:0002616,6.93e-37,46;UBERON:0002346,1.22e-35,64;UBERON:0003075,1.22e-35,64;UBERON:0007284,1.22e-35,64;UBERON:0003080,8.55e-33,40;UBERON:0004121,1.15e-31,95;UBERON:0000924,1.15e-31,95;UBERON:0006601,1.15e-31,95;UBERON:0002780,3.23e-31,39;UBERON:0001890,3.23e-31,39;UBERON:0006240,3.23e-31,39;UBERON:0010371,5.06e-30,73;UBERON:0003056,2.65e-25,49;UBERON:0000956,8.30e-25,21;UBERON:0001869,8.30e-25,21;UBERON:0000203,8.30e-25,21;UBERON:0010314,8.89e-22,92;UBERON:0002619,1.29e-18,17;UBERON:0002021,1.70e-16,10;UBERON:0000411,1.70e-16,10;UBERON:0001950,1.70e-16,10;UBERON:0000025,1.12e-15,114;UBERON:0004111,5.23e-14,122;UBERON:0002420,1.52e-13,8;UBERON:0007245,1.52e-13,8;UBERON:0010009,1.52e-13,8;UBERON:0010011,1.52e-13,8;UBERON:0000454,1.52e-13,8;UBERON:0003076,5.26e-13,12;UBERON:0003057,5.26e-13,12;UBERON:0002240,3.96e-10,6;UBERON:0005174,3.96e-10,6;UBERON:0001137,3.96e-10,6;UBERON:0011216,5.83e-10,194;UBERON:0000369,4.47e-09,5;UBERON:0002435,4.47e-09,5;UBERON:0000204,4.47e-09,5;UBERON:0010082,4.47e-09,5;UBERON:0001948,1.15e-08,5;UBERON:0002315,1.15e-08,5;UBERON:0002950,1.30e-07,4;UBERON:0001891,1.30e-07,4;UBERON:0009616,1.30e-07,4;UBERON:0010286,1.30e-07,4;UBERON:0000483,5.73e-07,174;UBERON:0000119,8.77e-07,176 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971020706062307,0.125896817975577,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0.514518872071894,0,0,1.41621522601718,2.64495489636016,1.26766280701236,0,0,0,0,0,0,0,4.35496371695606,4.72520784160917,2.52389953621658,3.71346279724945,5.52171352379034,5.14461356702807,4.60058260887535,0.919218786610021,2.20231761998777,6.51205424234457,5.68344173048101,1.45074916503213,3.29355516968675,2.08365348222704,3.62937898701795,5.06486349028512,3.81995619442025,2.65165726926301,3.70166370077668,2.23679334990361,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,2.63502717310392,5.02672096352292,0,0,0,0,4.6435098215495,19.2150253183823,10.0523481690292,6.77914848749878,7.92717917724025,7.68815764870372,7.62533936418461,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.340182495756639,0.384341160854549,0.468508622798644,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,10.3042074796422,6.07137213037778,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17431533968259,4.33683240391152,0.163934945376675,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,7.06906896127976,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,4.51801474093653,7.82552902062201,2.86447756719698,6.35856774671644,6.85082519770642,2.2661816921691,2.02506750069542,7.65546045481175,2.26571204492102,1.55328093525546,0.31136204275253,0.399024873401031,0.170733605754134,0.243106717068294,0.838452650511929,0.551530525350042,0.44449345560323,1.03017528619447,0,0.758091635291392,1.01391719956096,0.188626341386076,0.842773567228942,0.576226371643824,0.516919220600519,0.476293691283074,0.463537303779422,0.38581844092741,0,0.441596760403192,0.342869252385415,0.354951612318675,0.953744759789284,1.0174249164263,0.658765662907314,0.592302255241736,0,0,0.679020569229309,0,0.949080144993393,0.197008964751127,0,0.619747364743864,0.192906610981141,1.74867404556562,0,0.214871054048298,0.765153328275374,0.220591419119515,0 | |||
|short_description=p7@Gabbr1 | |||
}} |
Latest revision as of 11:30, 26 September 2015
Short description: | p7@Gabbr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Gabbr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:288 |
Association with transcript: | -15bp_to_ENSMUST00000172792_5end |
EntrezGene: | Gabbr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.53e-31 | 23 |
neuroblast (sensu Vertebrata) | 1.53e-31 | 23 |
neuron | 3.44e-20 | 33 |
neuronal stem cell | 3.44e-20 | 33 |
neuroblast | 3.44e-20 | 33 |
electrically signaling cell | 3.44e-20 | 33 |
electrically responsive cell | 3.41e-16 | 39 |
electrically active cell | 3.41e-16 | 39 |
neural cell | 3.70e-14 | 43 |
ectodermal cell | 1.04e-13 | 44 |
neurectodermal cell | 1.04e-13 | 44 |
neuron of cerebral cortex | 1.48e-07 | 6 |