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FFCP PHASE1:Mm9::chr4:13670626..13670657,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:13670626..13670657,+
|DHSsupport=NA
|short_description=p5@Runx1t1
|DPIdataset=NA
|description=CAGE_peak_5_at_Runx1t1_5end
|association_with_transcript=43bp_to_ENSMUST00000006761_5end
|EntrezGene=12395
|EntrezGene=12395
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q3UQX8
|UniProt=Q3UQX8
|association_with_transcript=43bp_to_ENSMUST00000006761_5end
|cluster_id=chr4:13670626..13670657,+
|description=CAGE_peak_5_at_Runx1t1_5end
|id=chr4:13670626..13670657,+
|ontology_enrichment_celltype=CL:0000117!1.45e-13!23;CL:0000337!1.45e-13!23;CL:0000540!1.20e-08!33;CL:0000047!1.20e-08!33;CL:0000031!1.20e-08!33;CL:0000404!1.20e-08!33;CL:0000393!6.50e-07!39;CL:0000211!6.50e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.09e-16,23;CL:0000337,1.09e-16,23;CL:0000540,1.16e-08,33;CL:0000047,1.16e-08,33;CL:0000031,1.16e-08,33;CL:0000404,1.16e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.31e-18!52;UBERON:0005068!6.31e-18!52;UBERON:0006241!6.31e-18!52;UBERON:0007135!6.31e-18!52;UBERON:0000033!2.31e-17!63;UBERON:0000955!7.17e-17!50;UBERON:0006238!7.17e-17!50;UBERON:0002020!1.00e-16!34;UBERON:0003056!2.01e-16!49;UBERON:0002616!3.56e-16!49;UBERON:0001017!1.19e-15!73;UBERON:0005743!1.19e-15!73;UBERON:0002346!2.05e-15!71;UBERON:0003075!2.05e-15!71;UBERON:0007284!2.05e-15!71;UBERON:0003080!2.92e-15!40;UBERON:0000073!1.30e-14!75;UBERON:0001016!1.30e-14!75;UBERON:0002780!1.32e-14!39;UBERON:0001890!1.32e-14!39;UBERON:0006240!1.32e-14!39;UBERON:0002791!4.85e-14!29;UBERON:0003528!4.85e-14!29;UBERON:0001893!4.85e-14!29;UBERON:0004121!9.66e-14!102;UBERON:0000924!9.66e-14!102;UBERON:0006601!9.66e-14!102;UBERON:0000025!1.10e-09!114;UBERON:0000956!1.28e-09!21;UBERON:0001869!1.28e-09!21;UBERON:0000203!1.28e-09!21;UBERON:0000468!2.56e-09!333;UBERON:0004111!3.43e-09!122;UBERON:0000153!3.18e-08!94;UBERON:0002619!1.90e-07!17;UBERON:0007811!2.63e-07!86;UBERON:0002021!8.15e-07!10;UBERON:0000411!8.15e-07!10;UBERON:0001950!8.15e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.13e-21,34;UBERON:0000073,1.72e-20,54;UBERON:0001049,2.68e-19,52;UBERON:0005068,2.68e-19,52;UBERON:0006241,2.68e-19,52;UBERON:0007135,2.68e-19,52;UBERON:0002346,3.67e-18,64;UBERON:0003075,3.67e-18,64;UBERON:0007284,3.67e-18,64;UBERON:0003528,1.76e-17,29;UBERON:0002791,1.76e-17,29;UBERON:0001893,1.76e-17,29;UBERON:0000955,2.44e-16,47;UBERON:0006238,2.44e-16,47;UBERON:0001017,6.79e-16,73;UBERON:0003056,7.89e-16,49;UBERON:0002616,1.58e-15,46;UBERON:0010371,2.61e-15,73;UBERON:0003080,3.11e-15,40;UBERON:0001016,6.09e-15,75;UBERON:0002780,1.84e-14,39;UBERON:0001890,1.84e-14,39;UBERON:0006240,1.84e-14,39;UBERON:0004121,2.47e-13,95;UBERON:0000924,2.47e-13,95;UBERON:0006601,2.47e-13,95;UBERON:0000956,6.73e-12,21;UBERON:0001869,6.73e-12,21;UBERON:0000203,6.73e-12,21;UBERON:0010314,2.68e-11,92;UBERON:0000025,2.62e-09,114;UBERON:0002619,3.72e-09,17;UBERON:0002021,3.45e-08,10;UBERON:0000411,3.45e-08,10;UBERON:0001950,3.45e-08,10;UBERON:0004111,7.17e-08,122;UBERON:0002420,6.97e-07,8;UBERON:0007245,6.97e-07,8;UBERON:0010009,6.97e-07,8;UBERON:0010011,6.97e-07,8;UBERON:0000454,6.97e-07,8
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,0.573066879877513,1.54701627683233,12.5436205732951,8.46385566835253,13.3104594736298,0,0,0,0,0,0,0,6.42875596312561,4.45519596494579,5.67877395648731,2.57085885963423,2.65042249141936,5.63457676388789,5.46319184803947,1.83843757322004,3.30347642998166,2.042997409363,3.22573719838111,7.51751840062105,7.31901148819277,10.4182674111352,3.07101298901519,2.8138130501584,1.5279824777681,4.12480019663135,3.70166370077668,6.52398060388552,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0,0.520455980298408,0.304465478312141,0.230615497256059,0.753613202763113,0.23517741427141,0,0.494389935468748,0.578397427679647,0,0.647067399789637,0,0,0,2.04946557908083,2.09446706813455,0.510914110417183,0,0,0,6.74057877321702,6.8625090422794,8.16753288733619,2.60736480288415,4.85859368927628,2.90903262383384,3.89379031362618,1.2220723662038,0.248813941220186,0.252722758433675,1.26265113531884,0.910843100738926,0.459804208866946,1.0803727788321,1.50704817835715,2.38127747029647,2.69038812598185,1.03071897015702,2.84573707812917,0.431135985865684,2.45837904218165,2.28736461413134,1.53437012699302,1.66828349535359,2.43776516565517,1.4404749548556,1.59227413454795,0,0,0,1.24275463521301,2.11073453982987,1.62055855314913,2.3674473558521,1.18058539048442,1.54267112887378,0.465067889500816,0.536546802799238,1.16765342367169,0.658239399653922,0.492502392237286,0.486412857275134,0.584799949701329,0.219550115291051,0.134206418760372,2.52347938276953,8.43817821510132,0,0,1.49301775374664,1.62565670302307,1.41754207454303,0.605050573870028,0.444756087689741,0.380451252225118,0.474529061544512,0.329397909448022,0.754005626400808,1.1937388322469,0.58489226135736,1.79763881730844,0.216138049874694,0,0,0,0,0.203651327845314,0.581857461502877,0.0701358198903186,0.189709611372772,0,0,0,0,0.667380422864376,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.739012760666419,3.03186258832776,1.79261474086228,1.86719594352707,1.87752198630802,2.01007508930179,0.476087281772027,0.390267295715598,5.2019597555043,2.6575762757853,3.50800491046472,2.78567635016755,1.72684981865896,1.59113964439663,0,0,0,0.551873492609465,2.72936002979246,1.99259867206745,0.327869890753351,0.252470927204373,0.315508219416257,0,0.646270193198397,0.238968797952552,0.668396022247182,0.849229592366497,0,0.584511715822624,0,9.63963949265421,0.141940085208269,1.24645922567079,1.30309567482861,3.46437258242324,1.32745138339963,0.728341908464944,1.81394134178851,0.188605079755898,0.295301892880773,0.922305443831782,1.29214146584111,0.727067458955011,1.06949213515416,0,1.05418608574999,0,5.10659408630682,0.720244376125241,0.646793418913773,0.643011105094777,1.24138163549592,0.891844088010353,0.822745103010605,0.608929898229199,0.23467170806371,0,0,1.31909002353184,0.968786560175433,1.02531972377865,1.07435109602823,0.328281799490123,0.582961673259701,2.59595422814714,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0.954670618015114,1.89801596148681,1.62655573701479,1.51207477150522,0.836353184057875,1.09181281873089,1.88810084938749,0.991841468704031,0.523511883968059,0.90730481304255,0.621339313086926,0,0.747582730219894,0.66183396182839,0.583353565032143,0.387479470433193,0.168956125490778,0.469428954583016,0.39061315453185,0,0,0.288030006257865,0,0.810900861160657,0.308132871494482,0.129920822977795,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0.680191150845634,0,0,0,1.73870634628971,0.375364950902364,0.915758121336325,0.214368379079066,0.501572104035363,5.64751842617067,4.60325236507177,3.43737308063638,2.06223818812425,4.7955776383945,3.7769694869485,6.75022500231806,4.5032120322422,3.17199686288943,4.65984280576638,2.07574695168353,3.19219898720825,1.70733605754134,2.91728060481953,1.67690530102386,1.2869045591501,1.33348036680969,3.09052585858341,2.24643446714271,2.27427490587418,2.28131369901216,2.64076877940507,1.87283014939765,2.17685518176556,1.95280594449085,1.42888107384922,2.0859178670074,2.50781986602817,1.23625770240992,2.50238164228475,1.02860775715625,1.59728225543404,1.90748951957857,1.74415699958794,2.63506265162926,2.62305284464197,2.37806364734604,1.8414879800649,2.8518863907631,2.24456908663095,2.01679530811096,2.06859412988683,2.04615521584845,2.16911577660352,1.35034627686799,2.99772693525535,2.33931608445408,2.14871054048298,1.14772999241306,1.10295709559758,0.695603506861264
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,0.573066879877513,1.54701627683233,12.5436205732951,8.46385566835253,13.3104594736298,0,0,0,0,0,0,0,6.42875596312561,4.45519596494579,5.67877395648731,2.57085885963423,2.65042249141936,5.63457676388789,5.46319184803947,1.83843757322004,3.30347642998166,2.042997409363,3.22573719838111,7.51751840062105,7.31901148819277,10.4182674111352,3.07101298901519,2.8138130501584,1.5279824777681,4.12480019663135,3.70166370077668,6.52398060388552,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0,0.520455980298408,0.304465478312141,0.230615497256059,0.753613202763113,0.23517741427141,0,0.494389935468748,0.578397427679647,0,0.647067399789637,0,0,0,2.04946557908083,2.09446706813455,0.510914110417183,0,0,0,6.74057877321702,6.8625090422794,8.16753288733619,2.60736480288415,4.85859368927628,2.90903262383384,3.89379031362618,1.2220723662038,0.248813941220186,0.252722758433675,1.26265113531884,0.910843100738926,0.459804208866946,1.0803727788321,1.50704817835715,2.38127747029647,2.69038812598185,1.03071897015702,2.84573707812917,0.431135985865684,2.45837904218165,2.28736461413134,1.53437012699302,1.66828349535359,2.43776516565517,1.4404749548556,1.59227413454795,0,0,0,1.24275463521301,2.11073453982987,1.62055855314913,2.3674473558521,1.18058539048442,1.54267112887378,0.465067889500816,0.536546802799238,1.16765342367169,0.658239399653922,0.492502392237286,0.486412857275134,0.584799949701329,0.219550115291051,0.134206418760372,2.52347938276953,8.43817821510132,0,0,1.49301775374664,1.62565670302307,1.41754207454303,0.605050573870028,0.444756087689741,0.380451252225118,0.474529061544512,0.329397909448022,0.754005626400808,1.1937388322469,0.58489226135736,1.79763881730844,0.216138049874694,0,0,0,0,0.203651327845314,0.581857461502877,0.0701358198903186,0.189709611372772,0,0,0,0,0.667380422864376,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.739012760666419,3.03186258832776,1.79261474086228,1.86719594352707,1.87752198630802,2.01007508930179,0.476087281772027,0.390267295715598,5.2019597555043,2.6575762757853,3.50800491046472,2.78567635016755,1.72684981865896,1.59113964439663,0,0,0,0.551873492609465,2.72936002979246,1.99259867206745,0.327869890753351,0.252470927204373,0.315508219416257,0,0.646270193198397,0.238968797952552,0.668396022247182,0.849229592366497,0,0.584511715822624,0,9.63963949265421,0.141940085208269,1.24645922567079,1.30309567482861,3.46437258242324,1.32745138339963,0.728341908464944,1.81394134178851,0.188605079755898,0.295301892880773,0.922305443831782,1.29214146584111,0.727067458955011,1.06949213515416,0,1.05418608574999,0,5.10659408630682,0.720244376125241,0.646793418913773,0.643011105094777,1.24138163549592,0.891844088010353,0.822745103010605,0.608929898229199,0.23467170806371,0,0,1.31909002353184,0.968786560175433,1.02531972377865,1.07435109602823,0.328281799490123,0.582961673259701,2.59595422814714,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0.954670618015114,1.89801596148681,1.62655573701479,1.51207477150522,0.836353184057875,1.09181281873089,1.88810084938749,0.991841468704031,0.523511883968059,0.90730481304255,0.621339313086926,0,0.747582730219894,0.66183396182839,0.583353565032143,0.387479470433193,0.168956125490778,0.469428954583016,0.39061315453185,0,0,0.288030006257865,0,0.810900861160657,0.308132871494482,0.129920822977795,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0.680191150845634,0,0,0,1.73870634628971,0.375364950902364,0.915758121336325,0.214368379079066,0.501572104035363,5.64751842617067,4.60325236507177,3.43737308063638,2.06223818812425,4.7955776383945,3.7769694869485,6.75022500231806,4.5032120322422,3.17199686288943,4.65984280576638,2.07574695168353,3.19219898720825,1.70733605754134,2.91728060481953,1.67690530102386,1.2869045591501,1.33348036680969,3.09052585858341,2.24643446714271,2.27427490587418,2.28131369901216,2.64076877940507,1.87283014939765,2.17685518176556,1.95280594449085,1.42888107384922,2.0859178670074,2.50781986602817,1.23625770240992,2.50238164228475,1.02860775715625,1.59728225543404,1.90748951957857,1.74415699958794,2.63506265162926,2.62305284464197,2.37806364734604,1.8414879800649,2.8518863907631,2.24456908663095,2.01679530811096,2.06859412988683,2.04615521584845,2.16911577660352,1.35034627686799,2.99772693525535,2.33931608445408,2.14871054048298,1.14772999241306,1.10295709559758,0.695603506861264
|short_description=p5@Runx1t1
}}
}}

Latest revision as of 13:31, 26 September 2015

Short description:p5@Runx1t1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Runx1t1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 43bp_to_ENSMUST00000006761_5end
EntrezGene:Runx1t1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Runx1t1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C312.54
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.43
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.52
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.52
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.74
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F18.17
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G18.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.09e-1623
neuroblast (sensu Vertebrata)1.09e-1623
neuron1.16e-0833
neuronal stem cell1.16e-0833
neuroblast1.16e-0833
electrically signaling cell1.16e-0833

Uber anatomy
Ontology termp-valuen
gray matter7.13e-2134
regional part of nervous system1.72e-2054
neural tube2.68e-1952
neural rod2.68e-1952
future spinal cord2.68e-1952
neural keel2.68e-1952
neurectoderm3.67e-1864
neural plate3.67e-1864
presumptive neural plate3.67e-1864
brain grey matter1.76e-1729
regional part of telencephalon1.76e-1729
telencephalon1.76e-1729
brain2.44e-1647
future brain2.44e-1647
central nervous system6.79e-1673
pre-chordal neural plate7.89e-1649
regional part of brain1.58e-1546
ecto-epithelium2.61e-1573
anterior neural tube3.11e-1540
nervous system6.09e-1575
regional part of forebrain1.84e-1439
forebrain1.84e-1439
future forebrain1.84e-1439
ectoderm-derived structure2.47e-1395
ectoderm2.47e-1395
presumptive ectoderm2.47e-1395
cerebral cortex6.73e-1221
cerebral hemisphere6.73e-1221
pallium6.73e-1221
structure with developmental contribution from neural crest2.68e-1192
tube2.62e-09114
regional part of cerebral cortex3.72e-0917
occipital lobe3.45e-0810
visual cortex3.45e-0810
neocortex3.45e-0810
anatomical conduit7.17e-08122
basal ganglion6.97e-078
nuclear complex of neuraxis6.97e-078
aggregate regional part of brain6.97e-078
collection of basal ganglia6.97e-078
cerebral subcortex6.97e-078
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