FFCP PHASE1:Mm9::chr7:31076822..31076826,+: Difference between revisions
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{{FFCP|EntrezGene=76686|HGNC=|MCL_coexpression_id=1330|UniProt=B9EHT4|association_with_transcript=50bp_to_NM_001081114,uc009gea.1_5end|description=CAGE_peak_7_at_Clip3_5end|id=chr7:31076822..31076826,+|ontology_enrichment_celltype=CL:0000221!1.46e-20!44;CL:0000133!1.46e-20!44;CL:0002319!3.08e-20!43;CL:0000055!3.06e-19!50;CL:0000540!3.99e-16!33;CL:0000047!3.99e-16!33;CL:0000031!3.99e-16!33;CL:0000404!3.99e-16!33;CL:0000393!7.68e-16!39;CL:0000211!7.68e-16!39;CL:0000117!1.09e-12!23;CL:0000337!1.09e-12!23;CL:0002321!3.06e-09!70;CL:0000220!3.06e-09!70|ontology_enrichment_celltype_v019_2=CL:0002319,3.68e-11,43;CL:0000221,8.24e-11,44;CL:0000133,8.24e-11,44;CL:0000117,7.19e-10,23;CL:0000337,7.19e-10,23;CL:0002610,2.59e-07,3;CL:0000540,2.93e-07,33;CL:0000047,2.93e-07,33;CL:0000031,2.93e-07,33;CL:0000404,2.93e-07,33;CL:0002453,6.72e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.22e-41!75;UBERON:0001016!6.22e-41!75;UBERON:0001017!1.35e-40!73;UBERON:0005743!1.35e-40!73;UBERON:0004121!4.86e-34!102;UBERON:0000924!4.86e-34!102;UBERON:0006601!4.86e-34!102;UBERON:0002346!7.81e-30!71;UBERON:0003075!7.81e-30!71;UBERON:0007284!7.81e-30!71;UBERON:0001049!1.93e-29!52;UBERON:0005068!1.93e-29!52;UBERON:0006241!1.93e-29!52;UBERON:0007135!1.93e-29!52;UBERON:0000033!1.27e-28!63;UBERON:0000955!3.05e-28!50;UBERON:0006238!3.05e-28!50;UBERON:0002616!1.67e-27!49;UBERON:0003056!7.59e-22!49;UBERON:0002020!1.32e-20!34;UBERON:0003080!2.60e-20!40;UBERON:0002780!1.21e-19!39;UBERON:0001890!1.21e-19!39;UBERON:0006240!1.21e-19!39;UBERON:0002791!2.24e-17!29;UBERON:0003528!2.24e-17!29;UBERON:0001893!2.24e-17!29;UBERON:0000153!4.01e-15!94;UBERON:0007811!1.32e-14!86;UBERON:0000956!7.80e-13!21;UBERON:0001869!7.80e-13!21;UBERON:0000203!7.80e-13!21;UBERON:0002619!2.14e-11!17;UBERON:0003076!1.25e-09!12;UBERON:0003057!1.25e-09!12;UBERON:0002021!5.26e-08!10;UBERON:0000411!5.26e-08!10;UBERON:0001950!5.26e-08!10;UBERON:0000025!6.93e-08!114;UBERON:0004111!2.86e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.36e-41,73;UBERON:0001016,2.97e-40,75;UBERON:0000073,8.32e-39,54;UBERON:0001049,2.42e-35,52;UBERON:0005068,2.42e-35,52;UBERON:0006241,2.42e-35,52;UBERON:0007135,2.42e-35,52;UBERON:0004121,5.99e-30,95;UBERON:0000924,5.99e-30,95;UBERON:0006601,5.99e-30,95;UBERON:0000955,1.22e-29,47;UBERON:0006238,1.22e-29,47;UBERON:0002616,4.21e-28,46;UBERON:0002346,2.89e-27,64;UBERON:0003075,2.89e-27,64;UBERON:0007284,2.89e-27,64;UBERON:0002020,1.00e-26,34;UBERON:0010371,5.95e-23,73;UBERON:0003528,1.48e-21,29;UBERON:0002791,1.48e-21,29;UBERON:0001893,1.48e-21,29;UBERON:0003080,2.90e-20,40;UBERON:0002780,6.46e-19,39;UBERON:0001890,6.46e-19,39;UBERON:0006240,6.46e-19,39;UBERON:0002619,1.14e-18,17;UBERON:0000956,4.59e-17,21;UBERON:0001869,4.59e-17,21;UBERON:0000203,4.59e-17,21;UBERON:0003076,8.95e-17,12;UBERON:0003057,8.95e-17,12;UBERON:0010314,1.28e-16,92;UBERON:0002021,4.72e-16,10;UBERON:0000411,4.72e-16,10;UBERON:0001950,4.72e-16,10;UBERON:0003056,1.58e-15,49;UBERON:0000025,6.15e-12,114;UBERON:0004111,1.17e-10,122;UBERON:0011216,4.01e-10,194;UBERON:0004733,5.82e-10,6;UBERON:0004732,5.82e-10,6;UBERON:0002028,5.82e-10,6;UBERON:0007277,5.82e-10,6;UBERON:0002240,2.30e-08,6;UBERON:0005174,2.30e-08,6;UBERON:0001137,2.30e-08,6;UBERON:0004684,2.59e-07,3;UBERON:0002275,2.59e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,3.12956537739216,0.65407546914134,3.29529274101708,2.91644848611425,0.699932108126813,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0.606949382578793,1.05798195854407,1.26766280701236,0.677689064138264,0.889294796111139,0,0,0,4.19440154725767,7.30014780110954,0.311068836925433,0.540023753326763,0.420649922702764,1.99955689082663,2.87129103237098,0.244981598429908,0.383381884072945,0.919218786610021,3.30347642998166,3.19218345212969,3.5329502648936,0.791317726381163,0.731901148819277,1.04182674111352,1.95428099300967,0.56276261003168,2.59757021220577,1.47314292736834,0.996601765593721,1.3047961207771,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0,0.301445281105245,0.470354828542819,0,0,0.144599356919912,0,0,0,0,0,8.78342391034641,7.12118803165747,0.255457055208591,0,0,0,1.9472783122627,2.74500361691176,1.13088916901578,3.30266208365325,2.81287003063364,4.1557608911912,3.89379031362618,0.509196819251581,0,0,0.841767423545896,0.260240885925407,0,0.540186389416048,0.30140963567143,0.476255494059295,0.2562274405697,0.281105173679186,0.776110112217047,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,3.99550902271842,1.64647379806855,0,0,0.213288250535234,0,0.257734922644187,0,0.444756087689741,0,0,0,0,0,0.1949640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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76686 | |||
|HGNC= | |||
|MCL_coexpression_id=1330 | |||
|TSSclassifier=NA | |||
|UniProt=B9EHT4 | |||
|association_with_transcript=50bp_to_NM_001081114,uc009gea.1_5end | |||
|cluster_id=chr7:31076822..31076826,+ | |||
|description=CAGE_peak_7_at_Clip3_5end | |||
|id=chr7:31076822..31076826,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.46e-20!44;CL:0000133!1.46e-20!44;CL:0002319!3.08e-20!43;CL:0000055!3.06e-19!50;CL:0000540!3.99e-16!33;CL:0000047!3.99e-16!33;CL:0000031!3.99e-16!33;CL:0000404!3.99e-16!33;CL:0000393!7.68e-16!39;CL:0000211!7.68e-16!39;CL:0000117!1.09e-12!23;CL:0000337!1.09e-12!23;CL:0002321!3.06e-09!70;CL:0000220!3.06e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.68e-11,43;CL:0000221,8.24e-11,44;CL:0000133,8.24e-11,44;CL:0000117,7.19e-10,23;CL:0000337,7.19e-10,23;CL:0002610,2.59e-07,3;CL:0000540,2.93e-07,33;CL:0000047,2.93e-07,33;CL:0000031,2.93e-07,33;CL:0000404,2.93e-07,33;CL:0002453,6.72e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.22e-41!75;UBERON:0001016!6.22e-41!75;UBERON:0001017!1.35e-40!73;UBERON:0005743!1.35e-40!73;UBERON:0004121!4.86e-34!102;UBERON:0000924!4.86e-34!102;UBERON:0006601!4.86e-34!102;UBERON:0002346!7.81e-30!71;UBERON:0003075!7.81e-30!71;UBERON:0007284!7.81e-30!71;UBERON:0001049!1.93e-29!52;UBERON:0005068!1.93e-29!52;UBERON:0006241!1.93e-29!52;UBERON:0007135!1.93e-29!52;UBERON:0000033!1.27e-28!63;UBERON:0000955!3.05e-28!50;UBERON:0006238!3.05e-28!50;UBERON:0002616!1.67e-27!49;UBERON:0003056!7.59e-22!49;UBERON:0002020!1.32e-20!34;UBERON:0003080!2.60e-20!40;UBERON:0002780!1.21e-19!39;UBERON:0001890!1.21e-19!39;UBERON:0006240!1.21e-19!39;UBERON:0002791!2.24e-17!29;UBERON:0003528!2.24e-17!29;UBERON:0001893!2.24e-17!29;UBERON:0000153!4.01e-15!94;UBERON:0007811!1.32e-14!86;UBERON:0000956!7.80e-13!21;UBERON:0001869!7.80e-13!21;UBERON:0000203!7.80e-13!21;UBERON:0002619!2.14e-11!17;UBERON:0003076!1.25e-09!12;UBERON:0003057!1.25e-09!12;UBERON:0002021!5.26e-08!10;UBERON:0000411!5.26e-08!10;UBERON:0001950!5.26e-08!10;UBERON:0000025!6.93e-08!114;UBERON:0004111!2.86e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.36e-41,73;UBERON:0001016,2.97e-40,75;UBERON:0000073,8.32e-39,54;UBERON:0001049,2.42e-35,52;UBERON:0005068,2.42e-35,52;UBERON:0006241,2.42e-35,52;UBERON:0007135,2.42e-35,52;UBERON:0004121,5.99e-30,95;UBERON:0000924,5.99e-30,95;UBERON:0006601,5.99e-30,95;UBERON:0000955,1.22e-29,47;UBERON:0006238,1.22e-29,47;UBERON:0002616,4.21e-28,46;UBERON:0002346,2.89e-27,64;UBERON:0003075,2.89e-27,64;UBERON:0007284,2.89e-27,64;UBERON:0002020,1.00e-26,34;UBERON:0010371,5.95e-23,73;UBERON:0003528,1.48e-21,29;UBERON:0002791,1.48e-21,29;UBERON:0001893,1.48e-21,29;UBERON:0003080,2.90e-20,40;UBERON:0002780,6.46e-19,39;UBERON:0001890,6.46e-19,39;UBERON:0006240,6.46e-19,39;UBERON:0002619,1.14e-18,17;UBERON:0000956,4.59e-17,21;UBERON:0001869,4.59e-17,21;UBERON:0000203,4.59e-17,21;UBERON:0003076,8.95e-17,12;UBERON:0003057,8.95e-17,12;UBERON:0010314,1.28e-16,92;UBERON:0002021,4.72e-16,10;UBERON:0000411,4.72e-16,10;UBERON:0001950,4.72e-16,10;UBERON:0003056,1.58e-15,49;UBERON:0000025,6.15e-12,114;UBERON:0004111,1.17e-10,122;UBERON:0011216,4.01e-10,194;UBERON:0004733,5.82e-10,6;UBERON:0004732,5.82e-10,6;UBERON:0002028,5.82e-10,6;UBERON:0007277,5.82e-10,6;UBERON:0002240,2.30e-08,6;UBERON:0005174,2.30e-08,6;UBERON:0001137,2.30e-08,6;UBERON:0004684,2.59e-07,3;UBERON:0002275,2.59e-07,3 | |||
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|short_description=p7@Clip3 | |||
}} |
Latest revision as of 14:21, 26 September 2015
Short description: | p7@Clip3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Clip3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1330 |
Association with transcript: | 50bp_to_NM_001081114, uc009gea.1_5end |
EntrezGene: | Clip3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.68e-11 | 43 |
ectodermal cell | 8.24e-11 | 44 |
neurectodermal cell | 8.24e-11 | 44 |
CNS neuron (sensu Vertebrata) | 7.19e-10 | 23 |
neuroblast (sensu Vertebrata) | 7.19e-10 | 23 |
raphe nuclei neuron | 2.59e-07 | 3 |
neuron | 2.93e-07 | 33 |
neuronal stem cell | 2.93e-07 | 33 |
neuroblast | 2.93e-07 | 33 |
electrically signaling cell | 2.93e-07 | 33 |
oligodendrocyte precursor cell | 6.72e-07 | 8 |