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FFCP PHASE1:Mm9::chr7:31088925..31088945,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:31088925..31088945,+
|DHSsupport=NA
|short_description=p3@Clip3
|DPIdataset=NA
|description=CAGE_peak_3_at_Clip3_5end
|association_with_transcript=4bp_to_ENSMUST00000132844_5end
|EntrezGene=76686
|EntrezGene=76686
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=4bp_to_ENSMUST00000132844_5end
|cluster_id=chr7:31088925..31088945,+
|description=CAGE_peak_3_at_Clip3_5end
|id=chr7:31088925..31088945,+
|ontology_enrichment_celltype=CL:0002319!1.54e-16!43;CL:0000221!1.95e-16!44;CL:0000133!1.95e-16!44;CL:0000055!1.02e-15!50;CL:0000117!3.75e-13!23;CL:0000337!3.75e-13!23;CL:0000540!5.14e-13!33;CL:0000047!5.14e-13!33;CL:0000031!5.14e-13!33;CL:0000404!5.14e-13!33;CL:0000393!6.29e-13!39;CL:0000211!6.29e-13!39
|ontology_enrichment_celltype_v019_2=CL:0000117,7.36e-21,23;CL:0000337,7.36e-21,23;CL:0002319,3.73e-20,43;CL:0000221,1.72e-19,44;CL:0000133,1.72e-19,44;CL:0000540,5.90e-17,33;CL:0000047,5.90e-17,33;CL:0000031,5.90e-17,33;CL:0000404,5.90e-17,33;CL:0000393,1.39e-14,39;CL:0000211,1.39e-14,39;CL:0002321,6.69e-10,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.41e-34!73;UBERON:0005743!7.41e-34!73;UBERON:0000073!1.98e-33!75;UBERON:0001016!1.98e-33!75;UBERON:0004121!1.62e-31!102;UBERON:0000924!1.62e-31!102;UBERON:0006601!1.62e-31!102;UBERON:0002346!3.16e-28!71;UBERON:0003075!3.16e-28!71;UBERON:0007284!3.16e-28!71;UBERON:0000033!5.61e-27!63;UBERON:0001049!4.14e-26!52;UBERON:0005068!4.14e-26!52;UBERON:0006241!4.14e-26!52;UBERON:0007135!4.14e-26!52;UBERON:0000955!4.52e-26!50;UBERON:0006238!4.52e-26!50;UBERON:0002616!2.53e-25!49;UBERON:0003056!1.92e-21!49;UBERON:0003080!1.16e-19!40;UBERON:0002780!5.70e-19!39;UBERON:0001890!5.70e-19!39;UBERON:0006240!5.70e-19!39;UBERON:0002020!3.23e-18!34;UBERON:0002791!3.25e-16!29;UBERON:0003528!3.25e-16!29;UBERON:0001893!3.25e-16!29;UBERON:0000153!6.73e-13!94;UBERON:0007811!7.14e-13!86;UBERON:0000956!6.89e-12!21;UBERON:0001869!6.89e-12!21;UBERON:0000203!6.89e-12!21;UBERON:0002619!1.77e-09!17;UBERON:0003076!5.65e-07!12;UBERON:0003057!5.65e-07!12;UBERON:0000468!8.81e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.44e-46,73;UBERON:0001016,1.54e-44,75;UBERON:0000073,2.88e-40,54;UBERON:0001049,1.46e-37,52;UBERON:0005068,1.46e-37,52;UBERON:0006241,1.46e-37,52;UBERON:0007135,1.46e-37,52;UBERON:0004121,8.10e-35,95;UBERON:0000924,8.10e-35,95;UBERON:0006601,8.10e-35,95;UBERON:0000955,1.72e-34,47;UBERON:0006238,1.72e-34,47;UBERON:0002616,3.73e-33,46;UBERON:0002346,5.58e-33,64;UBERON:0003075,5.58e-33,64;UBERON:0007284,5.58e-33,64;UBERON:0002020,9.83e-30,34;UBERON:0003080,2.69e-28,40;UBERON:0010371,3.04e-27,73;UBERON:0003528,3.80e-27,29;UBERON:0002791,3.80e-27,29;UBERON:0001893,3.80e-27,29;UBERON:0002780,4.94e-27,39;UBERON:0001890,4.94e-27,39;UBERON:0006240,4.94e-27,39;UBERON:0003056,2.26e-24,49;UBERON:0000956,1.32e-20,21;UBERON:0001869,1.32e-20,21;UBERON:0000203,1.32e-20,21;UBERON:0010314,5.40e-20,92;UBERON:0002619,5.88e-16,17;UBERON:0000025,6.85e-12,114;UBERON:0002021,7.76e-11,10;UBERON:0000411,7.76e-11,10;UBERON:0001950,7.76e-11,10;UBERON:0004111,2.55e-10,122;UBERON:0003076,2.72e-09,12;UBERON:0003057,2.72e-09,12;UBERON:0011216,7.34e-08,194;UBERON:0002420,1.30e-07,8;UBERON:0007245,1.30e-07,8;UBERON:0010009,1.30e-07,8;UBERON:0010011,1.30e-07,8;UBERON:0000454,1.30e-07,8
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608261587317087,0.183546752161682,0.782391344348039,1.52617609466313,2.41654801007919,1.94429899074283,0.699932108126813,1.43752564364972,0,0,0,0.771778308107841,0.573066879877513,1.54701627683233,1.01158230429799,2.64495489636016,2.53532561402472,0,0,0,0,0,3.29560121570245,7.30014780110954,1.97010263386108,4.72520784160917,2.3135745748652,1.99955689082663,1.10434270475807,1.83736198822431,3.54628242767475,0.919218786610021,2.20231761998777,4.46905683298157,4.30098293117482,1.31886287730194,3.47653045689157,2.08365348222704,3.07101298901519,1.12552522006336,2.90316670775939,1.47314292736834,2.13557521198654,0.559198337475902,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0,0,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0.913396434936424,0.230615497256059,0.904335843315735,0.940709657085638,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,5.85561594023094,2.72280718857492,0.255457055208591,0,0,0,3.14560342750128,0.915001205637253,3.64397621127307,2.60736480288415,2.81287003063364,4.1557608911912,2.10913641988085,1.2220723662038,0,0,0.631325567659422,0.910843100738926,0.459804208866946,0.720248519221397,0.60281927134286,0.680364991513279,1.5373646434182,0.187403449119458,1.81092359517311,1.07783996466421,0.756424320671277,0.703804496655795,0.43839146485515,1.39023624612799,0,0,1.39323986772945,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0,0.393528463494808,0.154267112887378,0.697601834251224,0.268273401399619,0,0,0,0,0,0,0,1.47202963994889,4.01327988279209,0,0,0.639864751605702,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0.571242563048644,0,0.814605311381257,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0.335012514883631,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,2.40825884981688,1.87538698547525,1.14754461763673,0,0,0.390438744296638,1.50796378412959,0.716906393857656,1.11399337041197,0.566153061577665,0,2.04579100537918,0.790575555893047,3.21321316421807,0.141940085208269,0.712262414669021,0.81443479676788,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,1.09060118843252,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.540183282093931,0.258717367565509,0.643011105094777,1.06404140185364,2.14042581122485,0.658196082408484,1.8267896946876,0,0,0,0,0.645857706783622,0.120625849856312,0.119372344003136,0,0,3.8939313422207,0,0.619160603889667,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0.632671987162271,0.203319467126849,0.216010681643603,0.418176592028937,0.655087691238533,0.134864346384821,0.247960367176008,0.26175594198403,0,0,0,0.448549638131936,0.165458490457098,0,0.258319646955462,1.01373675294467,0.469428954583016,0.5208175393758,0.209718688851422,0.483168241652012,0,0,0.405450430580328,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.453460767230423,0,0.179427713218951,0,0.386379188064381,0,0,0,0.501572104035363,2.25900737046827,2.76195141904306,2.86447756719698,4.1244763762485,0,2.2661816921691,5.40018000185445,4.5032120322422,3.17199686288943,1.55328093525546,1.03787347584177,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,1.23621034343337,0.320919209591815,0.252697211763798,1.01391719956096,0.188626341386076,0.842773567228942,0.704276676453562,0.459483751644906,0.476293691283074,0.579421629724277,1.15745532278223,0.412085900803307,0.441596760403192,0,0.887379030796687,0.715308569841963,0.290692833264657,0,0.507687647350059,0.365855945745545,0.526139422875686,0.814824683075171,2.24456908663095,0.711810108745045,0.492522411877817,0.409231043169689,0.154936841185966,0.771626443924566,1.49886346762768,0,0.214871054048298,0.382576664137687,0.661774257358546,0.231867835620421
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608261587317087,0.183546752161682,0.782391344348039,1.52617609466313,2.41654801007919,1.94429899074283,0.699932108126813,1.43752564364972,0,0,0,0.771778308107841,0.573066879877513,1.54701627683233,1.01158230429799,2.64495489636016,2.53532561402472,0,0,0,0,0,3.29560121570245,7.30014780110954,1.97010263386108,4.72520784160917,2.3135745748652,1.99955689082663,1.10434270475807,1.83736198822431,3.54628242767475,0.919218786610021,2.20231761998777,4.46905683298157,4.30098293117482,1.31886287730194,3.47653045689157,2.08365348222704,3.07101298901519,1.12552522006336,2.90316670775939,1.47314292736834,2.13557521198654,0.559198337475902,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0,0,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0.913396434936424,0.230615497256059,0.904335843315735,0.940709657085638,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,5.85561594023094,2.72280718857492,0.255457055208591,0,0,0,3.14560342750128,0.915001205637253,3.64397621127307,2.60736480288415,2.81287003063364,4.1557608911912,2.10913641988085,1.2220723662038,0,0,0.631325567659422,0.910843100738926,0.459804208866946,0.720248519221397,0.60281927134286,0.680364991513279,1.5373646434182,0.187403449119458,1.81092359517311,1.07783996466421,0.756424320671277,0.703804496655795,0.43839146485515,1.39023624612799,0,0,1.39323986772945,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0,0.393528463494808,0.154267112887378,0.697601834251224,0.268273401399619,0,0,0,0,0,0,0,1.47202963994889,4.01327988279209,0,0,0.639864751605702,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0.571242563048644,0,0.814605311381257,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0.335012514883631,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,2.40825884981688,1.87538698547525,1.14754461763673,0,0,0.390438744296638,1.50796378412959,0.716906393857656,1.11399337041197,0.566153061577665,0,2.04579100537918,0.790575555893047,3.21321316421807,0.141940085208269,0.712262414669021,0.81443479676788,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,1.09060118843252,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.540183282093931,0.258717367565509,0.643011105094777,1.06404140185364,2.14042581122485,0.658196082408484,1.8267896946876,0,0,0,0,0.645857706783622,0.120625849856312,0.119372344003136,0,0,3.8939313422207,0,0.619160603889667,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0.632671987162271,0.203319467126849,0.216010681643603,0.418176592028937,0.655087691238533,0.134864346384821,0.247960367176008,0.26175594198403,0,0,0,0.448549638131936,0.165458490457098,0,0.258319646955462,1.01373675294467,0.469428954583016,0.5208175393758,0.209718688851422,0.483168241652012,0,0,0.405450430580328,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.453460767230423,0,0.179427713218951,0,0.386379188064381,0,0,0,0.501572104035363,2.25900737046827,2.76195141904306,2.86447756719698,4.1244763762485,0,2.2661816921691,5.40018000185445,4.5032120322422,3.17199686288943,1.55328093525546,1.03787347584177,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,1.23621034343337,0.320919209591815,0.252697211763798,1.01391719956096,0.188626341386076,0.842773567228942,0.704276676453562,0.459483751644906,0.476293691283074,0.579421629724277,1.15745532278223,0.412085900803307,0.441596760403192,0,0.887379030796687,0.715308569841963,0.290692833264657,0,0.507687647350059,0.365855945745545,0.526139422875686,0.814824683075171,2.24456908663095,0.711810108745045,0.492522411877817,0.409231043169689,0.154936841185966,0.771626443924566,1.49886346762768,0,0.214871054048298,0.382576664137687,0.661774257358546,0.231867835620421
|short_description=p3@Clip3
}}
}}

Latest revision as of 14:24, 26 September 2015

Short description:p3@Clip3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Clip3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 4bp_to_ENSMUST00000132844_5end
EntrezGene:Clip3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Clip3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G14.01
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.36e-2123
neuroblast (sensu Vertebrata)7.36e-2123
neural cell3.73e-2043
ectodermal cell1.72e-1944
neurectodermal cell1.72e-1944
neuron5.90e-1733
neuronal stem cell5.90e-1733
neuroblast5.90e-1733
electrically signaling cell5.90e-1733
electrically responsive cell1.39e-1439
electrically active cell1.39e-1439
embryonic cell6.69e-1070

Uber anatomy
Ontology termp-valuen
central nervous system3.44e-4673
nervous system1.54e-4475
regional part of nervous system2.88e-4054
neural tube1.46e-3752
neural rod1.46e-3752
future spinal cord1.46e-3752
neural keel1.46e-3752
ectoderm-derived structure8.10e-3595
ectoderm8.10e-3595
presumptive ectoderm8.10e-3595
brain1.72e-3447
future brain1.72e-3447
regional part of brain3.73e-3346
neurectoderm5.58e-3364
neural plate5.58e-3364
presumptive neural plate5.58e-3364
gray matter9.83e-3034
anterior neural tube2.69e-2840
ecto-epithelium3.04e-2773
brain grey matter3.80e-2729
regional part of telencephalon3.80e-2729
telencephalon3.80e-2729
regional part of forebrain4.94e-2739
forebrain4.94e-2739
future forebrain4.94e-2739
pre-chordal neural plate2.26e-2449
cerebral cortex1.32e-2021
cerebral hemisphere1.32e-2021
pallium1.32e-2021
structure with developmental contribution from neural crest5.40e-2092
regional part of cerebral cortex5.88e-1617
tube6.85e-12114
occipital lobe7.76e-1110
visual cortex7.76e-1110
neocortex7.76e-1110
anatomical conduit2.55e-10122
posterior neural tube2.72e-0912
chordal neural plate2.72e-0912
organ system subdivision7.34e-08194
basal ganglion1.30e-078
nuclear complex of neuraxis1.30e-078
aggregate regional part of brain1.30e-078
collection of basal ganglia1.30e-078
cerebral subcortex1.30e-078
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