FFCP PHASE1:Mm9::chr7:31204821..31204891,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:31204821..31204891,- to FFCP PHASE1:Mm9::chr7:31204821..31204891,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=23900 | |EntrezGene=23900 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QUJ0,B7ZNZ7 | |UniProt=Q9QUJ0,B7ZNZ7 | ||
|association_with_transcript=0bp_to_ENSMUST00000075062,ENSMUST00000079384,NM_011827,uc009geg.1,uc009geh.1,uc012fhm.1_5end | |||
|cluster_id=chr7:31204821..31204891,- | |||
|description=CAGE_peak_1_at_Hcst_5end | |||
|id=chr7:31204821..31204891,- | |||
|ontology_enrichment_celltype=CL:0000988!5.42e-14!32;CL:0002032!5.42e-14!32;CL:0000037!5.42e-14!32;CL:0000566!5.42e-14!32;CL:0000837!5.42e-14!32;CL:0002031!1.83e-11!25;CL:0000738!1.92e-09!17;CL:0002087!1.92e-09!17;CL:0002320!2.51e-08!46;CL:0000134!2.51e-08!46;CL:0000838!3.18e-08!12;CL:0000049!8.11e-08!19;CL:0000084!1.07e-07!11;CL:0000827!1.07e-07!11;CL:0000542!1.93e-07!13;CL:0000051!1.93e-07!13;CL:0000791!2.96e-07!9;CL:0000789!2.96e-07!9;CL:0002420!2.96e-07!9;CL:0002419!2.96e-07!9;CL:0000790!2.96e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.12e-18,32;CL:0002032,2.12e-18,32;CL:0000037,2.12e-18,32;CL:0000837,2.12e-18,32;CL:0002031,4.79e-15,25;CL:0002320,1.02e-13,46;CL:0000134,1.02e-13,46;CL:0000738,3.05e-12,17;CL:0002087,3.05e-12,17;CL:0000838,1.07e-10,12;CL:0000219,1.66e-10,54;CL:0000049,4.63e-10,19;CL:0000084,5.60e-10,11;CL:0000827,5.60e-10,11;CL:0000542,1.66e-09,13;CL:0000051,1.66e-09,13;CL:0000791,2.25e-09,9;CL:0000789,2.25e-09,9;CL:0002420,2.25e-09,9;CL:0002419,2.25e-09,9;CL:0000790,2.25e-09,9;CL:0000624,1.87e-08,8;CL:0000763,4.05e-08,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.70e-20!48;UBERON:0002390!2.77e-19!45;UBERON:0003061!2.77e-19!45;UBERON:0002405!1.08e-17!70;UBERON:0004177!1.10e-10!29;UBERON:0003081!4.09e-10!88;UBERON:0002371!1.42e-09!16;UBERON:0005057!9.24e-09!51;UBERON:0001474!1.78e-08!22;UBERON:0004765!1.78e-08!22;UBERON:0001434!1.78e-08!22;UBERON:0002384!2.51e-08!46;UBERON:0003408!3.07e-08!24;UBERON:0002370!3.71e-08!23;UBERON:0000974!3.71e-08!23;UBERON:0004807!3.71e-08!23;UBERON:0005058!3.71e-08!23;UBERON:0003351!3.71e-08!23;UBERON:0009113!3.71e-08!23;UBERON:0003295!3.71e-08!23;UBERON:0009722!3.71e-08!23;UBERON:0005562!3.71e-08!23;UBERON:0007690!3.71e-08!23;UBERON:0006562!1.09e-07!24;UBERON:0001557!1.09e-07!24;UBERON:0001042!1.09e-07!24;UBERON:0008814!1.09e-07!24;UBERON:0009145!1.09e-07!24;UBERON:0000926!3.12e-07!193;UBERON:0004120!3.12e-07!193;UBERON:0006603!3.12e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.87e-29,48;UBERON:0002405,2.87e-29,48;UBERON:0002390,1.35e-27,45;UBERON:0003061,1.35e-27,45;UBERON:0004177,1.37e-15,29;UBERON:0005057,1.37e-15,29;UBERON:0002384,1.02e-13,46;UBERON:0000077,6.04e-13,35;UBERON:0002371,1.52e-12,16;UBERON:0003408,3.69e-12,24;UBERON:0002370,4.56e-12,23;UBERON:0000974,4.56e-12,23;UBERON:0004807,4.56e-12,23;UBERON:0005058,4.56e-12,23;UBERON:0003351,4.56e-12,23;UBERON:0009113,4.56e-12,23;UBERON:0003295,4.56e-12,23;UBERON:0009722,4.56e-12,23;UBERON:0005562,4.56e-12,23;UBERON:0007690,4.56e-12,23;UBERON:0001474,4.75e-12,22;UBERON:0004765,4.75e-12,22;UBERON:0001434,4.75e-12,22;UBERON:0003081,6.12e-12,87;UBERON:0006562,3.09e-11,24;UBERON:0001557,3.09e-11,24;UBERON:0001042,3.09e-11,24;UBERON:0008814,3.09e-11,24;UBERON:0009145,3.09e-11,24;UBERON:0002204,1.38e-09,32;UBERON:0000072,3.81e-09,27;UBERON:0000926,8.40e-09,120;UBERON:0004120,8.40e-09,120;UBERON:0006603,8.40e-09,120;UBERON:0001041,1.64e-08,80;UBERON:0001004,3.47e-08,42;UBERON:0000065,5.15e-08,41 | |||
|phase1_expression=0,0,0,0,0,0,0,67.9188681302691,78.56010696063,62.0270994753283,37.4967350413856,24.4900528115683,100.323627739687,102.194450427808,7.99463428357591,7.28910962603373,2.79824751251259,33.2812584452941,31.2620908621084,21.2194825899015,2.29616883407888,3.67376519443276,3.13439746966722,1.75991665072747,4.35877634027623,0,0,0,2.28028103347649,7.05684363327806,2.43903561720835,0.635030673459631,1.23012957516914,0,0,0,0.204169356262369,175.364753278764,171.112440450712,138.210268409083,243.52783604484,249.994647494791,175.754747797278,0,0,0,0,0,0,0,0.139986421625363,0,18.6238692724087,89.9449056094067,102.508608738452,0,0.286533439938757,0.515672092277442,0,0,0,0,0,40.9454371363037,47.4655854032148,58.2593694255802,11.6844043102178,7.68436610643109,0,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0.56276261003168,0.45839474333043,0,0.142371680799103,0.372798891650601,1.51452386666368,0,0,1.72084775396277,0,0,0,0.448026887097336,3.5111105032938,0,0,0,0,0,0,0,0,0,0,2.62622923353838,22.5275958773039,2.67195850316685,0.346970653532272,0.913396434936424,0,0.301445281105245,0.705532242814229,0.753999547978053,0.494389935468748,1.73519228303894,20.3460426948471,1.29413479957927,3.3126227769059,3.39412677194655,0,0.585561594023094,0,2.81002760729451,13.8985544426868,16.7972764678154,13.5965142968179,0.599162557619291,0.457500602818626,0,0.347648640384553,0.511430914660661,0,0.324482526135515,0.305518091550949,10.0769646194175,0.758168275301024,0.631325567659422,0.260240885925407,0.229902104433473,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0.189106080167819,0,0.876782929710299,0.556094498451196,0.348252166522167,1.02891068203972,0.199034266818493,17.5553296828309,14.411482798424,24.438060948021,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,0,0.350296027101508,0.16455984991348,0.656669856316381,0.405344047729279,0.438599962275997,0.658650345873152,0.268412837520744,0.420579897128254,0,6.60837565967596,0.264450566663544,0.213288250535234,0,0.77320476793256,0.403367049246685,0.667134131534611,0.380451252225118,1.89811624617805,0.329397909448022,1.00534083520108,0.795825888164603,0.974820435595601,0,1.94524244887225,0.995706366271836,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0.210407459670956,0.126473074248515,0.295220295959204,0.627994911365499,0.740382983530803,1.48226313543574,0.500535317148282,0.786235980452812,0.899448449539415,2.43432145666204,2.65294875727659,3.05551022137704,6.32931502391783,4.70192157647603,2.47105271869273,0,5.20997326735905,4.36852742360385,1.51547326768267,0.538192240565737,0,8.49864674766381,0.189491411770485,0.162964976442026,0.169745085775188,0.704070744865506,0.670025029767263,0,1.36593553500459,1.10344600874334,0.8858587585951,1.59454768657487,4.7520361267564,6.21665934717224,3.7608755231193,42.2215595029962,19.5806046174735,3.93411418415229,1.37968373152366,0.160550589987792,0.234423373184406,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.709700426041343,1.06839362200353,0.325773918707152,2.3095817216155,1.32745138339963,0,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,1.05418608574999,1.03135543248187,0,0.36012218806262,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,1.64270195644597,0.21183207086382,0,0.8244312647074,1.13025098687134,0.904693873922338,0.358117032009409,0,1.45740418314925,0.18542530201051,20.1627639341466,4.95328483111734,8.51894825900674,7.15800136617826,8.33834789098253,10.5237959675,10.0287273696375,9.93655311497972,11.0559979043539,1.90934123603023,0,0,0.324016022465404,0.209088296014469,0,0.809186078308924,0.991841468704031,0.26175594198403,1.42576470620972,1.24267862617385,0,0,0.165458490457098,0.388902376688095,0.516639293910924,0,0.704143431874524,0.39061315453185,0,0,0,21.8047673233443,2.43270258348197,5.13554785824136,9.35429925440124,8.23522800070415,8.34461690081313,11.2983722548771,14.6212631902831,11.1063094942962,11.202400578285,14.518970659705,17.1525870101964,19.1461564864256,17.88216603378,0.226730383615211,0,0,0,1.54551675225752,4.31669693537719,1.64836461840539,0.857473516316263,1.50471631210609,0.564751842617067,0,0,0.68741272937475,0,0.755393897389701,0,0.900642406448441,3.17199686288943,1.55328093525546,0,0,0.170733605754134,0.972426868273176,0,0.919217542250071,0.666740183404846,0.412070114477788,1.92551525755089,0,1.77435509923168,0.754505365544305,1.31098110457835,0.192075457214608,0.34461281373368,0.952587382566147,0.347652977834566,0.38581844092741,0.824171801606613,0.294397840268795,1.71434626192708,0.532427418478012,1.1921809497366,0.726732083161643,0.846984423737976,0.338458431566706,0.73171189149109,0,0.271608227691724,0,0.237270036248348,0.591026894253381,1.63692417267876,0.464810523557898,1.15743966588685,0.749431733813838,0.701794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| |phase1_expression=0,0,0,0,0,0,0,67.9188681302691,78.56010696063,62.0270994753283,37.4967350413856,24.4900528115683,100.323627739687,102.194450427808,7.99463428357591,7.28910962603373,2.79824751251259,33.2812584452941,31.2620908621084,21.2194825899015,2.29616883407888,3.67376519443276,3.13439746966722,1.75991665072747,4.35877634027623,0,0,0,2.28028103347649,7.05684363327806,2.43903561720835,0.635030673459631,1.23012957516914,0,0,0,0.204169356262369,175.364753278764,171.112440450712,138.210268409083,243.52783604484,249.994647494791,175.754747797278,0,0,0,0,0,0,0,0.139986421625363,0,18.6238692724087,89.9449056094067,102.508608738452,0,0.286533439938757,0.515672092277442,0,0,0,0,0,40.9454371363037,47.4655854032148,58.2593694255802,11.6844043102178,7.68436610643109,0,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0.56276261003168,0.45839474333043,0,0.142371680799103,0.372798891650601,1.51452386666368,0,0,1.72084775396277,0,0,0,0.448026887097336,3.5111105032938,0,0,0,0,0,0,0,0,0,0,2.62622923353838,22.5275958773039,2.67195850316685,0.346970653532272,0.913396434936424,0,0.301445281105245,0.705532242814229,0.753999547978053,0.494389935468748,1.73519228303894,20.3460426948471,1.29413479957927,3.3126227769059,3.39412677194655,0,0.585561594023094,0,2.81002760729451,13.8985544426868,16.7972764678154,13.5965142968179,0.599162557619291,0.457500602818626,0,0.347648640384553,0.511430914660661,0,0.324482526135515,0.305518091550949,10.0769646194175,0.758168275301024,0.631325567659422,0.260240885925407,0.229902104433473,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0.189106080167819,0,0.876782929710299,0.556094498451196,0.348252166522167,1.02891068203972,0.199034266818493,17.5553296828309,14.411482798424,24.438060948021,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,0,0.350296027101508,0.16455984991348,0.656669856316381,0.405344047729279,0.438599962275997,0.658650345873152,0.268412837520744,0.420579897128254,0,6.60837565967596,0.264450566663544,0.213288250535234,0,0.77320476793256,0.403367049246685,0.667134131534611,0.380451252225118,1.89811624617805,0.329397909448022,1.00534083520108,0.795825888164603,0.974820435595601,0,1.94524244887225,0.995706366271836,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0.210407459670956,0.126473074248515,0.295220295959204,0.627994911365499,0.740382983530803,1.48226313543574,0.500535317148282,0.786235980452812,0.899448449539415,2.43432145666204,2.65294875727659,3.05551022137704,6.32931502391783,4.70192157647603,2.47105271869273,0,5.20997326735905,4.36852742360385,1.51547326768267,0.538192240565737,0,8.49864674766381,0.189491411770485,0.162964976442026,0.169745085775188,0.704070744865506,0.670025029767263,0,1.36593553500459,1.10344600874334,0.8858587585951,1.59454768657487,4.7520361267564,6.21665934717224,3.7608755231193,42.2215595029962,19.5806046174735,3.93411418415229,1.37968373152366,0.160550589987792,0.234423373184406,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.709700426041343,1.06839362200353,0.325773918707152,2.3095817216155,1.32745138339963,0,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,1.05418608574999,1.03135543248187,0,0.36012218806262,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,1.64270195644597,0.21183207086382,0,0.8244312647074,1.13025098687134,0.904693873922338,0.358117032009409,0,1.45740418314925,0.18542530201051,20.1627639341466,4.95328483111734,8.51894825900674,7.15800136617826,8.33834789098253,10.5237959675,10.0287273696375,9.93655311497972,11.0559979043539,1.90934123603023,0,0,0.324016022465404,0.209088296014469,0,0.809186078308924,0.991841468704031,0.26175594198403,1.42576470620972,1.24267862617385,0,0,0.165458490457098,0.388902376688095,0.516639293910924,0,0.704143431874524,0.39061315453185,0,0,0,21.8047673233443,2.43270258348197,5.13554785824136,9.35429925440124,8.23522800070415,8.34461690081313,11.2983722548771,14.6212631902831,11.1063094942962,11.202400578285,14.518970659705,17.1525870101964,19.1461564864256,17.88216603378,0.226730383615211,0,0,0,1.54551675225752,4.31669693537719,1.64836461840539,0.857473516316263,1.50471631210609,0.564751842617067,0,0,0.68741272937475,0,0.755393897389701,0,0.900642406448441,3.17199686288943,1.55328093525546,0,0,0.170733605754134,0.972426868273176,0,0.919217542250071,0.666740183404846,0.412070114477788,1.92551525755089,0,1.77435509923168,0.754505365544305,1.31098110457835,0.192075457214608,0.34461281373368,0.952587382566147,0.347652977834566,0.38581844092741,0.824171801606613,0.294397840268795,1.71434626192708,0.532427418478012,1.1921809497366,0.726732083161643,0.846984423737976,0.338458431566706,0.73171189149109,0,0.271608227691724,0,0.237270036248348,0.591026894253381,1.63692417267876,0.464810523557898,1.15743966588685,0.749431733813838,0.701794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| ||
|short_description=p1@Hcst | |||
}} | }} |
Latest revision as of 14:34, 26 September 2015
Short description: | p1@Hcst |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hcst_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000075062, ENSMUST00000079384, NM_011827, uc009geg.1, uc009geh.1, uc012fhm.1_5end |
EntrezGene: | Hcst |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.12e-18 | 32 |
hematopoietic oligopotent progenitor cell | 2.12e-18 | 32 |
hematopoietic stem cell | 2.12e-18 | 32 |
hematopoietic multipotent progenitor cell | 2.12e-18 | 32 |
hematopoietic lineage restricted progenitor cell | 4.79e-15 | 25 |
connective tissue cell | 1.02e-13 | 46 |
mesenchymal cell | 1.02e-13 | 46 |
leukocyte | 3.05e-12 | 17 |
nongranular leukocyte | 3.05e-12 | 17 |
lymphoid lineage restricted progenitor cell | 1.07e-10 | 12 |
motile cell | 1.66e-10 | 54 |
common myeloid progenitor | 4.63e-10 | 19 |
T cell | 5.60e-10 | 11 |
pro-T cell | 5.60e-10 | 11 |
lymphocyte | 1.66e-09 | 13 |
common lymphoid progenitor | 1.66e-09 | 13 |
mature alpha-beta T cell | 2.25e-09 | 9 |
alpha-beta T cell | 2.25e-09 | 9 |
immature T cell | 2.25e-09 | 9 |
mature T cell | 2.25e-09 | 9 |
immature alpha-beta T cell | 2.25e-09 | 9 |
CD4-positive, alpha-beta T cell | 1.87e-08 | 8 |
myeloid cell | 4.05e-08 | 16 |