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FFCP PHASE1:Mm9::chr7:31911778..31911791,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:31911778..31911791,-
|DHSsupport=NA
|short_description=p3@Scn1b
|DPIdataset=NA
|description=CAGE_peak_3_at_Scn1b_5end
|association_with_transcript=172bp_to_ENSMUST00000098548,NM_011322,uc009gie.1_5end
|EntrezGene=20266
|EntrezGene=20266
|HGNC=
|HGNC=
|MCL_coexpression_id=984
|TSSclassifier=NA
|UniProt=P97952
|UniProt=P97952
|association_with_transcript=172bp_to_ENSMUST00000098548,NM_011322,uc009gie.1_5end
|cluster_id=chr7:31911778..31911791,-
|description=CAGE_peak_3_at_Scn1b_5end
|id=chr7:31911778..31911791,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.78e-12!73;UBERON:0005743!2.78e-12!73;UBERON:0000955!3.14e-12!50;UBERON:0006238!3.14e-12!50;UBERON:0002616!7.47e-12!49;UBERON:0001049!7.88e-12!52;UBERON:0005068!7.88e-12!52;UBERON:0006241!7.88e-12!52;UBERON:0007135!7.88e-12!52;UBERON:0000073!8.61e-12!75;UBERON:0001016!8.61e-12!75;UBERON:0000033!8.75e-12!63;UBERON:0004121!2.79e-11!102;UBERON:0000924!2.79e-11!102;UBERON:0006601!2.79e-11!102;UBERON:0002346!1.13e-08!71;UBERON:0003075!1.13e-08!71;UBERON:0007284!1.13e-08!71;UBERON:0003080!3.13e-07!40;UBERON:0002780!8.48e-07!39;UBERON:0001890!8.48e-07!39;UBERON:0006240!8.48e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.89e-17,54;UBERON:0001049,1.83e-15,52;UBERON:0005068,1.83e-15,52;UBERON:0006241,1.83e-15,52;UBERON:0007135,1.83e-15,52;UBERON:0001017,3.76e-15,73;UBERON:0000955,2.07e-14,47;UBERON:0006238,2.07e-14,47;UBERON:0001016,2.12e-14,75;UBERON:0002616,7.88e-14,46;UBERON:0004121,1.69e-13,95;UBERON:0000924,1.69e-13,95;UBERON:0006601,1.69e-13,95;UBERON:0002346,2.24e-12,64;UBERON:0003075,2.24e-12,64;UBERON:0007284,2.24e-12,64;UBERON:0010371,6.53e-12,73;UBERON:0002020,2.01e-10,34;UBERON:0002021,3.77e-10,10;UBERON:0000411,3.77e-10,10;UBERON:0001950,3.77e-10,10;UBERON:0003528,8.88e-10,29;UBERON:0002791,8.88e-10,29;UBERON:0001893,8.88e-10,29;UBERON:0003080,3.20e-09,40;UBERON:0010314,3.34e-09,92;UBERON:0002619,9.25e-09,17;UBERON:0002780,1.49e-08,39;UBERON:0001890,1.49e-08,39;UBERON:0006240,1.49e-08,39;UBERON:0003076,6.43e-08,12;UBERON:0003057,6.43e-08,12;UBERON:0003056,8.30e-08,49;UBERON:0000956,1.14e-07,21;UBERON:0001869,1.14e-07,21;UBERON:0000203,1.14e-07,21;UBERON:0004111,1.92e-07,122;UBERON:0004733,2.49e-07,6;UBERON:0004732,2.49e-07,6;UBERON:0002028,2.49e-07,6;UBERON:0007277,2.49e-07,6;UBERON:0005418,6.81e-07,5;UBERON:0002472,6.81e-07,5;UBERON:0008784,6.81e-07,5;UBERON:0006058,6.81e-07,5;UBERON:0004709,6.81e-07,5;UBERON:0002529,6.81e-07,5;UBERON:0010538,6.81e-07,5;UBERON:0005420,6.81e-07,5;UBERON:0010758,6.81e-07,5;UBERON:0000978,6.81e-07,5;UBERON:0002103,6.81e-07,5;UBERON:0000376,6.81e-07,5;UBERON:0000154,6.81e-07,5;UBERON:0010709,6.81e-07,5;UBERON:0005730,6.81e-07,5
|phase1_expression=2.08193501236232,0,0,0,0,0.33575854382378,0,0.129123323441576,0,0.468129052643987,0,0.239316476986009,0,0,0,0,0.699561878128147,0,0,0,3.14660173558958,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,2.43304634926835,1.28482726513177,7.82391344348039,1.30815093828268,7.0299578475031,3.69416808241138,1.95980990275508,0,0,0,0,1.80081605225163,2.29226751951005,5.15672092277442,0.202316460859598,0,0,6.43804610931351,2.66788438833342,1.3498495759221,5.93319817540185,3.5524005747305,2.69640099466564,2.30530983192933,0,0,0,1.99955689082663,3.53389665522582,0.122490799214954,0,0,16.5173821499083,17.8762273319263,12.4421291937557,0.131886287730194,0,0.52091337055676,24.2889209131201,19.1339287410771,10.2374826010463,0.883885756421003,1.99320353118744,0.186399445825301,0.151452386666368,0.0755715601067855,0.579728977403356,0,0,0,0,0,19.9431076587088,0.511290967734173,1.55871602761721,0.35333957451034,1.69012103732017,1.28326477414318,0,0,0.649473123033642,0.253359865475099,0.505524445014783,2.2836775943812,0.517875767294343,0,0.346970653532272,0.304465478312141,0.461230994512117,0,0.352766121407114,0.251333182659351,0.247194967734374,1.87979163995885,13.2691582792481,4.36770494858005,19.8757366614354,22.7891368973554,0,19.0307518057506,28.6941988334433,0.255457055208591,0.11981512450592,0,0,7.63932260964596,8.23501085073528,1.00523481690292,9.90798625095976,8.18289463457058,12.6750707181332,8.11206315338788,0.101839363850316,6.22034853050465,1.0108910337347,2.52530227063769,0,0,0,0.60281927134286,0.0680364991513279,0,0.187403449119458,3.10444044886819,0,0,0.527853372491847,1.09597866213787,0,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0,0.16455984991348,0.164167464079095,0.324275238183423,0.146199987425332,0.878200461164203,0.536825675041487,7.99101804543684,0.823236899034275,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0.616985819609003,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0.324270453550071,0,2.87536413054709,0,0.624075346229121,0,1.25578189465339,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0,0.714130922658041,0.195133647857799,0.157635144106191,0.44292937929755,0,0.327726629431476,0.518054945597687,0,0,0.54390568381871,0,0.827810238914197,20.068823748474,18.8710815413447,0,104.52296386261,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.668396022247182,0.566153061577665,0,0.876767573733936,0,2.24924921495265,0.283880170416537,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,1.05418608574999,0,1.70219802876894,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.535106452806212,0.658196082408484,0.913394847343798,0,0,0.882113592219848,5.60613260001032,0.484393280087717,0.542816324353403,0.596861720015682,0.656563598980245,0,12.9797711407357,0.341741761595705,0.206386867963223,0,0.376736914009382,0.410082683163076,0.457556346413045,1.18984900995699,0.839708713941948,1.65839968565309,0.954670618015114,0,0,0,0,0,0.134864346384821,0,0.26175594198403,0.388844919875379,3.10669656543463,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0.209718688851422,0,9.79302021276743,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,29.0214891027471,2.44184548711471,1.97370484540847,4.02923079273788,0.579568782096571,0.563047426353546,0.36630324853453,0.428736758158132,0,5.0827665835536,3.68260189205742,4.01026859407578,6.35856774671644,5.48066015816514,12.8416962556249,10.8003600037089,6.75481804836331,6.34399372577886,12.9440077937955,0,0,0,0.486213434136588,0,0.183843508450014,1.55572709461131,0.618105171716683,0.962757628775446,0.758091635291392,0.760437899670719,0.754505365544305,0.655490552289177,0.448176066834085,0.918967503289812,0.952587382566147,0.579421629724277,1.35036454324594,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,0.715308569841963,1.0174249164263,0.188218760830661,0.507687647350059,0.914639864363863,0.789209134313529,1.22223702461276,2.24456908663095,0.711810108745045,0.591026894253381,1.63692417267876,0.77468420592983,0.578719832943424,0.249810577937946,1.16965804222704,2.14871054048298,1.3390183244819,9.70602244125868,17.8538233427725
|phase1_expression=2.08193501236232,0,0,0,0,0.33575854382378,0,0.129123323441576,0,0.468129052643987,0,0.239316476986009,0,0,0,0,0.699561878128147,0,0,0,3.14660173558958,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,2.43304634926835,1.28482726513177,7.82391344348039,1.30815093828268,7.0299578475031,3.69416808241138,1.95980990275508,0,0,0,0,1.80081605225163,2.29226751951005,5.15672092277442,0.202316460859598,0,0,6.43804610931351,2.66788438833342,1.3498495759221,5.93319817540185,3.5524005747305,2.69640099466564,2.30530983192933,0,0,0,1.99955689082663,3.53389665522582,0.122490799214954,0,0,16.5173821499083,17.8762273319263,12.4421291937557,0.131886287730194,0,0.52091337055676,24.2889209131201,19.1339287410771,10.2374826010463,0.883885756421003,1.99320353118744,0.186399445825301,0.151452386666368,0.0755715601067855,0.579728977403356,0,0,0,0,0,19.9431076587088,0.511290967734173,1.55871602761721,0.35333957451034,1.69012103732017,1.28326477414318,0,0,0.649473123033642,0.253359865475099,0.505524445014783,2.2836775943812,0.517875767294343,0,0.346970653532272,0.304465478312141,0.461230994512117,0,0.352766121407114,0.251333182659351,0.247194967734374,1.87979163995885,13.2691582792481,4.36770494858005,19.8757366614354,22.7891368973554,0,19.0307518057506,28.6941988334433,0.255457055208591,0.11981512450592,0,0,7.63932260964596,8.23501085073528,1.00523481690292,9.90798625095976,8.18289463457058,12.6750707181332,8.11206315338788,0.101839363850316,6.22034853050465,1.0108910337347,2.52530227063769,0,0,0,0.60281927134286,0.0680364991513279,0,0.187403449119458,3.10444044886819,0,0,0.527853372491847,1.09597866213787,0,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0,0.16455984991348,0.164167464079095,0.324275238183423,0.146199987425332,0.878200461164203,0.536825675041487,7.99101804543684,0.823236899034275,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0.616985819609003,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0.324270453550071,0,2.87536413054709,0,0.624075346229121,0,1.25578189465339,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0,0.714130922658041,0.195133647857799,0.157635144106191,0.44292937929755,0,0.327726629431476,0.518054945597687,0,0,0.54390568381871,0,0.827810238914197,20.068823748474,18.8710815413447,0,104.52296386261,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.668396022247182,0.566153061577665,0,0.876767573733936,0,2.24924921495265,0.283880170416537,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,1.05418608574999,0,1.70219802876894,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.535106452806212,0.658196082408484,0.913394847343798,0,0,0.882113592219848,5.60613260001032,0.484393280087717,0.542816324353403,0.596861720015682,0.656563598980245,0,12.9797711407357,0.341741761595705,0.206386867963223,0,0.376736914009382,0.410082683163076,0.457556346413045,1.18984900995699,0.839708713941948,1.65839968565309,0.954670618015114,0,0,0,0,0,0.134864346384821,0,0.26175594198403,0.388844919875379,3.10669656543463,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0.209718688851422,0,9.79302021276743,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,29.0214891027471,2.44184548711471,1.97370484540847,4.02923079273788,0.579568782096571,0.563047426353546,0.36630324853453,0.428736758158132,0,5.0827665835536,3.68260189205742,4.01026859407578,6.35856774671644,5.48066015816514,12.8416962556249,10.8003600037089,6.75481804836331,6.34399372577886,12.9440077937955,0,0,0,0.486213434136588,0,0.183843508450014,1.55572709461131,0.618105171716683,0.962757628775446,0.758091635291392,0.760437899670719,0.754505365544305,0.655490552289177,0.448176066834085,0.918967503289812,0.952587382566147,0.579421629724277,1.35036454324594,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,0.715308569841963,1.0174249164263,0.188218760830661,0.507687647350059,0.914639864363863,0.789209134313529,1.22223702461276,2.24456908663095,0.711810108745045,0.591026894253381,1.63692417267876,0.77468420592983,0.578719832943424,0.249810577937946,1.16965804222704,2.14871054048298,1.3390183244819,9.70602244125868,17.8538233427725
|short_description=p3@Scn1b
}}
}}

Latest revision as of 15:44, 26 September 2015

Short description:p3@Scn1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Scn1b_5end
Coexpression cluster:MCL_coexpression_mm9:984
Association with transcript: 172bp_to_ENSMUST00000098548, NM_011322, uc009gie.1_5end
EntrezGene:Scn1b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Scn1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.03
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.88
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.29
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.24
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G213.27
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A619.88
bone (os femoris), neonate N20.CNhs11195.1350-25C322.79
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B219.03
cerebellum, neonate N30.CNhs11135.1395-42I228.69
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.64
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D59.91
cortex, neonate N30.CNhs11107.1392-42F28.18
diencephalon, adult.CNhs10482.20-12F212.68
diencephalon, neonate N30.CNhs11201.1388-42B28.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.22
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C220.07
medulla oblongata, neonate N30.CNhs11200.1396-42A318.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2104.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C35.61
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C912.98
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E29.79
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B429.02
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.97
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.03
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D19.71
whole body, neonate N10.CNhs10518.761-6B417.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.89e-1754
neural tube1.83e-1552
neural rod1.83e-1552
future spinal cord1.83e-1552
neural keel1.83e-1552
central nervous system3.76e-1573
brain2.07e-1447
future brain2.07e-1447
nervous system2.12e-1475
regional part of brain7.88e-1446
ectoderm-derived structure1.69e-1395
ectoderm1.69e-1395
presumptive ectoderm1.69e-1395
neurectoderm2.24e-1264
neural plate2.24e-1264
presumptive neural plate2.24e-1264
ecto-epithelium6.53e-1273
gray matter2.01e-1034
occipital lobe3.77e-1010
visual cortex3.77e-1010
neocortex3.77e-1010
brain grey matter8.88e-1029
regional part of telencephalon8.88e-1029
telencephalon8.88e-1029
anterior neural tube3.20e-0940
structure with developmental contribution from neural crest3.34e-0992
regional part of cerebral cortex9.25e-0917
regional part of forebrain1.49e-0839
forebrain1.49e-0839
future forebrain1.49e-0839
posterior neural tube6.43e-0812
chordal neural plate6.43e-0812
pre-chordal neural plate8.30e-0849
cerebral cortex1.14e-0721
cerebral hemisphere1.14e-0721
pallium1.14e-0721
anatomical conduit1.92e-07122
segmental subdivision of hindbrain2.49e-076
segmental subdivision of nervous system2.49e-076
hindbrain2.49e-076
presumptive hindbrain2.49e-076
hindlimb bud6.81e-075
stylopod6.81e-075
lower limb segment6.81e-075
multi-limb segment region6.81e-075
pelvic appendage6.81e-075
limb segment6.81e-075
paired limb/fin segment6.81e-075
pelvic appendage bud6.81e-075
subdivision of organism along appendicular axis6.81e-075
leg6.81e-075
hindlimb6.81e-075
hindlimb stylopod6.81e-075
posterior region of body6.81e-075
pelvic complex6.81e-075
hindlimb/pelvic fin field6.81e-075
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