Personal tools

FFCP PHASE1:Mm9::chr4:147534740..147534761,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=230904
|EntrezGene=230904
|HGNC=
|HGNC=
|MCL_coexpression_id=2274
|TSSclassifier=NA
|UniProt=Q80UW2
|UniProt=Q80UW2
|association_with_transcript=10bp_to_ENSMUST00000047951_5end
|association_with_transcript=10bp_to_ENSMUST00000047951_5end
|cluster_id=chr4:147534740..147534761,+
|description=CAGE_peak_3_at_Fbxo2_5end
|description=CAGE_peak_3_at_Fbxo2_5end
|id=chr4:147534740..147534761,+
|id=chr4:147534740..147534761,+
|ontology_enrichment_celltype=CL:0000221!8.41e-11!44;CL:0000133!8.41e-11!44;CL:0002319!3.87e-10!43;CL:0002453!8.44e-08!8;CL:0000333!2.48e-07!10;CL:0000095!2.48e-07!10;CL:0000243!2.48e-07!10;CL:0000123!2.48e-07!10;CL:0000125!2.48e-07!10;CL:0000030!2.48e-07!10;CL:0000339!2.48e-07!10;CL:0000055!3.41e-07!50
|ontology_enrichment_celltype=CL:0000221!8.41e-11!44;CL:0000133!8.41e-11!44;CL:0002319!3.87e-10!43;CL:0002453!8.44e-08!8;CL:0000333!2.48e-07!10;CL:0000095!2.48e-07!10;CL:0000243!2.48e-07!10;CL:0000123!2.48e-07!10;CL:0000125!2.48e-07!10;CL:0000030!2.48e-07!10;CL:0000339!2.48e-07!10;CL:0000055!3.41e-07!50
|ontology_enrichment_celltype_v019_2=CL:0002453,1.70e-14,8;CL:0000221,1.93e-13,44;CL:0000133,1.93e-13,44;CL:0002319,2.67e-12,43;CL:0000333,3.00e-11,10;CL:0000095,3.00e-11,10;CL:0000243,3.00e-11,10;CL:0000123,3.00e-11,10;CL:0000125,3.00e-11,10;CL:0000030,3.00e-11,10;CL:0000339,3.00e-11,10;CL:0000128,6.85e-11,6;CL:0000126,6.85e-11,6;CL:0000127,6.85e-11,6;CL:0000117,3.19e-07,23;CL:0000337,3.19e-07,23;CL:0002321,3.68e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.86e-31!75;UBERON:0001016!4.86e-31!75;UBERON:0001017!5.90e-31!73;UBERON:0005743!5.90e-31!73;UBERON:0001049!3.67e-25!52;UBERON:0005068!3.67e-25!52;UBERON:0006241!3.67e-25!52;UBERON:0007135!3.67e-25!52;UBERON:0004121!1.96e-24!102;UBERON:0000924!1.96e-24!102;UBERON:0006601!1.96e-24!102;UBERON:0000955!3.63e-24!50;UBERON:0006238!3.63e-24!50;UBERON:0002616!1.90e-23!49;UBERON:0000033!5.66e-22!63;UBERON:0002346!4.37e-21!71;UBERON:0003075!4.37e-21!71;UBERON:0007284!4.37e-21!71;UBERON:0003080!1.82e-16!40;UBERON:0002780!1.08e-15!39;UBERON:0001890!1.08e-15!39;UBERON:0006240!1.08e-15!39;UBERON:0003056!1.68e-14!49;UBERON:0002020!3.39e-13!34;UBERON:0007811!7.86e-13!86;UBERON:0000153!6.28e-12!94;UBERON:0002791!2.94e-10!29;UBERON:0003528!2.94e-10!29;UBERON:0001893!2.94e-10!29;UBERON:0003076!1.38e-09!12;UBERON:0003057!1.38e-09!12;UBERON:0002021!5.72e-08!10;UBERON:0000411!5.72e-08!10;UBERON:0001950!5.72e-08!10;UBERON:0002619!6.01e-08!17;UBERON:0004111!1.68e-07!122;UBERON:0000956!2.35e-07!21;UBERON:0001869!2.35e-07!21;UBERON:0000203!2.35e-07!21;UBERON:0001894!9.09e-07!10;UBERON:0006222!9.09e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.37e-46,73;UBERON:0001016,4.78e-45,75;UBERON:0000073,3.22e-43,54;UBERON:0001049,7.52e-40,52;UBERON:0005068,7.52e-40,52;UBERON:0006241,7.52e-40,52;UBERON:0007135,7.52e-40,52;UBERON:0004121,8.93e-37,95;UBERON:0000924,8.93e-37,95;UBERON:0006601,8.93e-37,95;UBERON:0000955,7.42e-35,47;UBERON:0006238,7.42e-35,47;UBERON:0002616,1.77e-33,46;UBERON:0002346,2.68e-32,64;UBERON:0003075,2.68e-32,64;UBERON:0007284,2.68e-32,64;UBERON:0010371,5.75e-31,73;UBERON:0003080,7.17e-25,40;UBERON:0002780,2.14e-23,39;UBERON:0001890,2.14e-23,39;UBERON:0006240,2.14e-23,39;UBERON:0010314,1.99e-22,92;UBERON:0002020,2.55e-21,34;UBERON:0003056,1.67e-20,49;UBERON:0003528,3.34e-17,29;UBERON:0002791,3.34e-17,29;UBERON:0001893,3.34e-17,29;UBERON:0002619,1.36e-16,17;UBERON:0003076,1.15e-15,12;UBERON:0003057,1.15e-15,12;UBERON:0002021,7.58e-15,10;UBERON:0000411,7.58e-15,10;UBERON:0001950,7.58e-15,10;UBERON:0000956,7.97e-15,21;UBERON:0001869,7.97e-15,21;UBERON:0000203,7.97e-15,21;UBERON:0004111,1.82e-13,122;UBERON:0000025,7.23e-13,114;UBERON:0011216,4.37e-12,194;UBERON:0004733,2.42e-10,6;UBERON:0004732,2.42e-10,6;UBERON:0002028,2.42e-10,6;UBERON:0007277,2.42e-10,6;UBERON:0002950,2.67e-08,4;UBERON:0001891,2.67e-08,4;UBERON:0009616,2.67e-08,4;UBERON:0010286,2.67e-08,4;UBERON:0000483,1.08e-07,174;UBERON:0000119,1.72e-07,176;UBERON:0001894,4.37e-07,10;UBERON:0006222,4.37e-07,10;UBERON:0002240,5.01e-07,6;UBERON:0005174,5.01e-07,6;UBERON:0001137,5.01e-07,6;UBERON:0002037,8.54e-07,4;UBERON:0002680,8.54e-07,4;UBERON:0001895,8.54e-07,4;UBERON:0010092,8.54e-07,4;UBERON:0006215,8.54e-07,4
|phase1_expression=10.4096750618116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0.22940928106717,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,8.06693078607652,21.3095597252438,15.5543919259427,3.07970127575798,18.6878333674463,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0,0.677689064138264,0.889294796111139,0,0,0,12.583204641773,25.7426264565442,0,0,0.210324961351382,8.2838785477103,5.07997644188711,0,0,0,11.0115880999389,10.9811110753261,11.6740965274745,0.131886287730194,0.457438218012048,0,19.821992929098,9.00420176050688,12.5294563176984,2.06240009831567,2.70506193518296,0.559198337475902,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.983110940922263,0.170430322578058,0.259786004602869,0,11.5491604216878,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.34255163915718,0,0.890652834388949,0,0,0,0.150722640552623,0.117588707135705,0.376999773989026,0,0.433798070759735,0,0.323533699894818,0,0,0,3.80615036115011,3.14170060220183,0,0,0,0,10.9347166765521,6.40500843946077,0.376963056338593,5.04090528557602,9.2057564638919,7.89594569326328,9.24775199486219,0,0.373220911830279,0.505445516867349,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,1.55222022443409,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,6.30869845692382,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,17.5000143086693,17.9333880486071,0,0.252470927204373,0,0,0.430846795465598,0.238968797952552,0,0,0,0.584511715822624,0.395287777946524,4.4984984299053,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46835250932197,0.18006109403131,0.517434735131018,1.07168517515796,0.532020700926821,1.78368817602071,1.97458824722545,4.56697423671899,0,0,0.441056796109924,0,0,0,0,0.164140899745061,0,12.9797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.179427713218951,0.335769232728157,0.19318959403219,0.187682475451182,0,0.214368379079066,0,4.51801474093653,3.22227665555024,2.29158205375759,2.23409137046794,6.85082519770642,6.7985450765073,6.75022500231806,9.90706647093285,2.71885445390523,2.5888015587591,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0.187283014939765,0.256100609619477,0.0574354689556133,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0,0.338458431566706,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0.492522411877817,0.409231043169689,0,0.385813221962283,0,0,0,0.382576664137687,0.220591419119515,0.927471342481686
|phase1_expression=10.4096750618116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0.22940928106717,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,8.06693078607652,21.3095597252438,15.5543919259427,3.07970127575798,18.6878333674463,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0,0.677689064138264,0.889294796111139,0,0,0,12.583204641773,25.7426264565442,0,0,0.210324961351382,8.2838785477103,5.07997644188711,0,0,0,11.0115880999389,10.9811110753261,11.6740965274745,0.131886287730194,0.457438218012048,0,19.821992929098,9.00420176050688,12.5294563176984,2.06240009831567,2.70506193518296,0.559198337475902,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.983110940922263,0.170430322578058,0.259786004602869,0,11.5491604216878,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.34255163915718,0,0.890652834388949,0,0,0,0.150722640552623,0.117588707135705,0.376999773989026,0,0.433798070759735,0,0.323533699894818,0,0,0,3.80615036115011,3.14170060220183,0,0,0,0,10.9347166765521,6.40500843946077,0.376963056338593,5.04090528557602,9.2057564638919,7.89594569326328,9.24775199486219,0,0.373220911830279,0.505445516867349,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,1.55222022443409,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,6.30869845692382,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,17.5000143086693,17.9333880486071,0,0.252470927204373,0,0,0.430846795465598,0.238968797952552,0,0,0,0.584511715822624,0.395287777946524,4.4984984299053,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46835250932197,0.18006109403131,0.517434735131018,1.07168517515796,0.532020700926821,1.78368817602071,1.97458824722545,4.56697423671899,0,0,0.441056796109924,0,0,0,0,0.164140899745061,0,12.9797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.179427713218951,0.335769232728157,0.19318959403219,0.187682475451182,0,0.214368379079066,0,4.51801474093653,3.22227665555024,2.29158205375759,2.23409137046794,6.85082519770642,6.7985450765073,6.75022500231806,9.90706647093285,2.71885445390523,2.5888015587591,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0.187283014939765,0.256100609619477,0.0574354689556133,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0,0.338458431566706,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0.492522411877817,0.409231043169689,0,0.385813221962283,0,0,0,0.382576664137687,0.220591419119515,0.927471342481686
|short_description=p3@Fbxo2
|short_description=p3@Fbxo2
}}
}}

Latest revision as of 17:11, 26 September 2015

Short description:p3@Fbxo2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Fbxo2_5end
Coexpression cluster:MCL_coexpression_mm9:2274
Association with transcript: 10bp_to_ENSMUST00000047951_5end
EntrezGene:Fbxo2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Fbxo2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.07
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B821.31
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C812.58
Mouse Microglia, donor2.CNhs12634.11736-123E825.74
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.93
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B29.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C217.50
medulla oblongata, neonate N30.CNhs11200.1396-42A317.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C912.98
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.37e-4673
nervous system4.78e-4575
regional part of nervous system3.22e-4354
neural tube7.52e-4052
neural rod7.52e-4052
future spinal cord7.52e-4052
neural keel7.52e-4052
ectoderm-derived structure8.93e-3795
ectoderm8.93e-3795
presumptive ectoderm8.93e-3795
brain7.42e-3547
future brain7.42e-3547
regional part of brain1.77e-3346
neurectoderm2.68e-3264
neural plate2.68e-3264
presumptive neural plate2.68e-3264
ecto-epithelium5.75e-3173
anterior neural tube7.17e-2540
regional part of forebrain2.14e-2339
forebrain2.14e-2339
future forebrain2.14e-2339
structure with developmental contribution from neural crest1.99e-2292
gray matter2.55e-2134
pre-chordal neural plate1.67e-2049
brain grey matter3.34e-1729
regional part of telencephalon3.34e-1729
telencephalon3.34e-1729
regional part of cerebral cortex1.36e-1617
posterior neural tube1.15e-1512
chordal neural plate1.15e-1512
occipital lobe7.58e-1510
visual cortex7.58e-1510
neocortex7.58e-1510
cerebral cortex7.97e-1521
cerebral hemisphere7.97e-1521
pallium7.97e-1521
anatomical conduit1.82e-13122
tube7.23e-13114
organ system subdivision4.37e-12194
segmental subdivision of hindbrain2.42e-106
segmental subdivision of nervous system2.42e-106
hindbrain2.42e-106
presumptive hindbrain2.42e-106
regional part of midbrain2.67e-084
midbrain2.67e-084
presumptive midbrain2.67e-084
midbrain neural tube2.67e-084
epithelium1.08e-07174
cell layer1.72e-07176
diencephalon4.37e-0710
future diencephalon4.37e-0710
spinal cord5.01e-076
dorsal region element5.01e-076
dorsum5.01e-076
cerebellum8.54e-074
regional part of metencephalon8.54e-074
metencephalon8.54e-074
future metencephalon8.54e-074
rhombic lip8.54e-074
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:147534740..147534761,%2B&oldid=4264590"